RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 ZC3H12AQ5D1E8 599 aaKnown RBP8.66□□□□□ -1.02
CSMD1-216ENST00000602557 WDR59Q6PJI9 974 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 MPP5Q8N3R9 675 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 KAT5Q92993 513 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 LOC100509620A0A075B734 347 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 RGL2O15211 777 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 BUD23O43709 281 aaKnown RBP8.66□□□□□ -1.02
CSMD1-216ENST00000602557 NOBOXO60393 691 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 TRUB2O95900 331 aaKnown RBP8.66□□□□□ -1.02
CSMD1-216ENST00000602557 CDKL1Q00532 357 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 MTAPQ13126 283 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 HYIQ5T013 277 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 WSCD1Q658N2 575 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 COMMD7Q86VX2 200 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 IQCKQ8N0W5 287 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 BPIFB1Q8TDL5 484 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 ASB2Q96Q27 587 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 C1QTNF1Q9BXJ1 281 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 TMEM216Q9P0N5 145 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 ZNF69Q9UC07 566 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 RPLP2P05387 115 aaKnown RBP8.66□□□□□ -1.02
CSMD1-216ENST00000602557 BCL2L1Q07817 233 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 IRAK1BP1Q5VVH5 260 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 REP15Q6BDI9 236 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 DNAJC28Q9NX36 388 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 KCTD5Q9NXV2 234 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.66□□□□□ -1.02
CSMD1-216ENST00000602557 LIASO43766 372 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 LRIG2O94898 1065 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 RB1P06400 928 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 PNMA5Q96PV4 448 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 MRPL45Q9BRJ2 306 aaKnown RBP8.66□□□□□ -1.02
CSMD1-216ENST00000602557 POLR1EQ9GZS1 481 aaKnown RBP8.66□□□□□ -1.02
CSMD1-216ENST00000602557 SIGLEC16A6NMB1 481 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 ADORA2AP29274 412 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 HNMTP50135 292 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 CSTF1Q05048 431 aaKnown RBP8.66□□□□□ -1.02
CSMD1-216ENST00000602557 ZNF234Q14588 700 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 ZNF433Q8N7K0 673 aaPredicted RBP8.66□□□□□ -1.02
CSMD1-216ENST00000602557 ZNF451Q9Y4E5 1061 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 FAM186AA6NE01 2351 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 SPEF2Q9C093 1822 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 TCRBV5S4A2TA0A5A2 114 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 STX16-NPEPL1H3BU86 382 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 STX16O14662 325 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 OR6A2O95222 327 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 TGFB3P10600 412 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 SERPINA4P29622 427 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 WDR45BQ5MNZ6 344 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 CRTC1Q6UUV9 634 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 ARCQ7LC44 396 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 PTGR2Q8N8N7 351 aaPredicted RBP8.66□□□□□ -1.02
CSMD1-216ENST00000602557 C3orf58Q8NDZ4 430 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 GLIS3Q8NEA6 775 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 EPS8L1Q8TE68 723 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 THG1LQ9NWX6 298 aaKnown RBP8.66□□□□□ -1.02
CSMD1-216ENST00000602557 MED11Q9P086 117 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 KANSL3Q9P2N6 904 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 ADGRE2Q9UHX3 823 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 NCKAP1Q9Y2A7 1128 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 CENPBD1B2RD01 187 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 K7EPI3 171 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 MAGEC1O60732 1142 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 FNTBP49356 437 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 NRG1Q02297 640 aaPredicted RBP8.66□□□□□ -1.02
CSMD1-216ENST00000602557 ZNF45Q02386 682 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 CBFBQ13951 182 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 ARRDC4Q8NCT1 418 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 FNDC8Q8TC99 324 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 LENG9Q96B70 501 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 KAT8Q9H7Z6 458 aaKnown RBP8.66□□□□□ -1.02
CSMD1-216ENST00000602557 KCNU1A8MYU2 1149 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 ABHD2P08910 425 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 PIRTP0C851 137 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 DGKAP23743 735 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 KLF10Q13118 480 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 RBM4BQ9BQ04 359 aaKnown RBP8.66□□□□□ -1.02
CSMD1-216ENST00000602557 RBM4Q9BWF3 364 aaKnown RBP8.66□□□□□ -1.02
CSMD1-216ENST00000602557 BPIFA1Q9NP55 256 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 SNX6Q9UNH7 406 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 PDE10AQ9Y233 779 aa8.66□□□□□ -1.02
CSMD1-216ENST00000602557 SLC38A2Q96QD8 506 aa8.65□□□□□ -1.02
CSMD1-216ENST00000602557 BEX1Q9HBH7 125 aa8.65□□□□□ -1.02
CSMD1-216ENST00000602557 POLR3HQ9Y535 204 aaPredicted RBP8.65□□□□□ -1.02
CSMD1-216ENST00000602557 A0A075B6Q4 140 aa8.65□□□□□ -1.02
CSMD1-216ENST00000602557 A0A088AWK7 358 aa8.65□□□□□ -1.02
CSMD1-216ENST00000602557 ZNF99A8MXY4 864 aaPredicted RBP8.65□□□□□ -1.02
CSMD1-216ENST00000602557 ACKR2O00590 384 aa8.65□□□□□ -1.02
CSMD1-216ENST00000602557 ZNF10P21506 573 aaPredicted RBP8.65□□□□□ -1.02
CSMD1-216ENST00000602557 AQP1P29972 269 aa8.65□□□□□ -1.02
CSMD1-216ENST00000602557 UGT2B15P54855 530 aa8.65□□□□□ -1.02
CSMD1-216ENST00000602557 POLR2LP62875 67 aaKnown RBP8.65□□□□□ -1.02
CSMD1-216ENST00000602557 RPL38P63173 70 aaKnown RBP8.65□□□□□ -1.02
CSMD1-216ENST00000602557 SKP1P63208 163 aa8.65□□□□□ -1.02
CSMD1-216ENST00000602557 TMEM236Q5W0B7 351 aa8.65□□□□□ -1.02
CSMD1-216ENST00000602557 FBXL19Q6PCT2 694 aa8.65□□□□□ -1.02
CSMD1-216ENST00000602557 OTOP1Q7RTM1 612 aa8.65□□□□□ -1.02
CSMD1-216ENST00000602557 SLITRK4Q8IW52 837 aa8.65□□□□□ -1.02
CSMD1-216ENST00000602557 TEX19Q8NA77 164 aa8.65□□□□□ -1.02
CSMD1-216ENST00000602557 TP53INP1Q96A56 240 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms