RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-227ENST00000600911 TBK1Q9UHD2 729 aa22.74■■□□□ 1.23
IRF3-227ENST00000600911 CRYL1Q9Y2S2 319 aa22.74■■□□□ 1.23
IRF3-227ENST00000600911 OR1A2Q9Y585 309 aa22.74■■□□□ 1.23
IRF3-227ENST00000600911 PCYT1BQ9Y5K3 369 aaPredicted RBP22.74■■□□□ 1.23
IRF3-227ENST00000600911 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa22.73■■□□□ 1.23
IRF3-227ENST00000600911 TLDC2A0PJX2 215 aa22.73■■□□□ 1.23
IRF3-227ENST00000600911 CEP85LQ5SZL2 805 aa22.73■■□□□ 1.23
IRF3-227ENST00000600911 TPRG1LQ5T0D9 272 aa22.73■■□□□ 1.23
IRF3-227ENST00000600911 KCTD16Q68DU8 428 aa22.73■■□□□ 1.23
IRF3-227ENST00000600911 MRNIPQ6NTE8 343 aa22.73■■□□□ 1.23
IRF3-227ENST00000600911 ADGRD1Q6QNK2 874 aa22.73■■□□□ 1.23
IRF3-227ENST00000600911 ZC3HC1Q86WB0 502 aaKnown RBP22.73■■□□□ 1.23
IRF3-227ENST00000600911 TMEFF1Q8IYR6 380 aa22.73■■□□□ 1.23
IRF3-227ENST00000600911 DTX3LQ8TDB6 740 aa22.73■■□□□ 1.23
IRF3-227ENST00000600911 BTN2A2Q8WVV5 523 aa22.73■■□□□ 1.23
IRF3-227ENST00000600911 CDKL2Q92772 493 aa22.73■■□□□ 1.23
IRF3-227ENST00000600911 GLYATL1Q969I3 302 aa22.73■■□□□ 1.23
IRF3-227ENST00000600911 BMFQ96LC9 184 aa22.73■■□□□ 1.23
IRF3-227ENST00000600911 RAD18Q9NS91 495 aa22.73■■□□□ 1.23
IRF3-227ENST00000600911 SMOXQ9NWM0 555 aa22.73■■□□□ 1.23
IRF3-227ENST00000600911 MTO1Q9Y2Z2 717 aaKnown RBP22.73■■□□□ 1.23
IRF3-227ENST00000600911 ZNF318Q5VUA4 2279 aa22.73■■□□□ 1.23
IRF3-227ENST00000600911 SDK1Q7Z5N4 2213 aa22.72■■□□□ 1.23
IRF3-227ENST00000600911 TCEA3O75764 348 aa22.72■■□□□ 1.23
IRF3-227ENST00000600911 MAOBP27338 520 aa22.72■■□□□ 1.23
IRF3-227ENST00000600911 GMPRP36959 345 aa22.72■■□□□ 1.23
IRF3-227ENST00000600911 CCR5P51681 352 aa22.72■■□□□ 1.23
IRF3-227ENST00000600911 RPL6Q02878 288 aaKnown RBP22.72■■□□□ 1.23
IRF3-227ENST00000600911 IFFO1Q0D2I5 559 aa22.72■■□□□ 1.23
IRF3-227ENST00000600911 ITGA9Q13797 1035 aa22.72■■□□□ 1.23
IRF3-227ENST00000600911 USP39Q53GS9 565 aaKnown RBP22.72■■□□□ 1.23
IRF3-227ENST00000600911 LRIG3Q6UXM1 1119 aa22.72■■□□□ 1.23
IRF3-227ENST00000600911 GCNT7Q6ZNI0 430 aa22.72■■□□□ 1.23
IRF3-227ENST00000600911 NLRP8Q86W28 1048 aa22.72■■□□□ 1.23
IRF3-227ENST00000600911 SLC26A11Q86WA9 606 aa22.72■■□□□ 1.23
IRF3-227ENST00000600911 HEATR4Q86WZ0 1026 aa22.72■■□□□ 1.23
IRF3-227ENST00000600911 CALML6Q8TD86 181 aa22.72■■□□□ 1.23
IRF3-227ENST00000600911 MZB1Q8WU39 189 aa22.72■■□□□ 1.23
IRF3-227ENST00000600911 ASB12Q8WXK4 309 aa22.72■■□□□ 1.23
IRF3-227ENST00000600911 VPS35Q96QK1 796 aa22.72■■□□□ 1.23
IRF3-227ENST00000600911 NDNQ99608 321 aa22.72■■□□□ 1.23
IRF3-227ENST00000600911 RBBP8Q99708 897 aa22.72■■□□□ 1.23
IRF3-227ENST00000600911 CPNE1Q99829 537 aa22.72■■□□□ 1.23
IRF3-227ENST00000600911 CDH19Q9H159 772 aa22.72■■□□□ 1.23
IRF3-227ENST00000600911 CCDC163A0A0D9SF12 145 aa22.71■■□□□ 1.23
IRF3-227ENST00000600911 NDUFS2O75306 463 aa22.71■■□□□ 1.23
IRF3-227ENST00000600911 GP5P40197 560 aa22.71■■□□□ 1.23
IRF3-227ENST00000600911 MSH2P43246 934 aa22.71■■□□□ 1.23
IRF3-227ENST00000600911 PDE1CQ14123 709 aaPredicted RBP22.71■■□□□ 1.23
IRF3-227ENST00000600911 GPR33Q49SQ1 333 aa22.71■■□□□ 1.23
IRF3-227ENST00000600911 CTSL3PQ5NE16 218 aa22.71■■□□□ 1.23
IRF3-227ENST00000600911 CLDN19Q8N6F1 224 aa22.71■■□□□ 1.23
IRF3-227ENST00000600911 TMEM145Q8NBT3 493 aa22.71■■□□□ 1.23
IRF3-227ENST00000600911 COX14Q96I36 57 aa22.71■■□□□ 1.23
IRF3-227ENST00000600911 BIRC8Q96P09 236 aa22.71■■□□□ 1.23
IRF3-227ENST00000600911 TMEM109Q9BVC6 243 aa22.71■■□□□ 1.23
IRF3-227ENST00000600911 VPS13AQ96RL7 3174 aa22.71■■□□□ 1.23
IRF3-227ENST00000600911 TP53BP1Q12888 1972 aaPredicted RBP22.71■■□□□ 1.23
IRF3-227ENST00000600911 IGLV3-16A0A075B6K0 115 aa22.71■■□□□ 1.23
IRF3-227ENST00000600911 METTL12A8MUP2 240 aa22.71■■□□□ 1.23
IRF3-227ENST00000600911 RASGRF2O14827 1237 aa22.71■■□□□ 1.23
IRF3-227ENST00000600911 HRO43593 1189 aa22.71■■□□□ 1.23
IRF3-227ENST00000600911 SGTAO43765 313 aa22.71■■□□□ 1.23
IRF3-227ENST00000600911 CDK3Q00526 305 aa22.71■■□□□ 1.23
IRF3-227ENST00000600911 TIAL1Q01085 375 aaKnown RBP eCLIP22.71■■□□□ 1.23
IRF3-227ENST00000600911 NAB1Q13506 487 aa22.71■■□□□ 1.23
IRF3-227ENST00000600911 LONP2Q86WA8 852 aa22.71■■□□□ 1.23
IRF3-227ENST00000600911 LMNTD2Q8IXW0 634 aa22.71■■□□□ 1.23
IRF3-227ENST00000600911 DDHD1Q8NEL9 900 aa22.71■■□□□ 1.23
IRF3-227ENST00000600911 LKAAEAR1Q8TD35 194 aa22.71■■□□□ 1.23
IRF3-227ENST00000600911 SNX19Q92543 992 aa22.71■■□□□ 1.23
IRF3-227ENST00000600911 NELL1Q92832 810 aa22.71■■□□□ 1.23
IRF3-227ENST00000600911 VPS39Q96JC1 886 aa22.71■■□□□ 1.23
IRF3-227ENST00000600911 P2RY12Q9H244 342 aa22.71■■□□□ 1.23
IRF3-227ENST00000600911 VIPAS39Q9H9C1 493 aa22.71■■□□□ 1.23
IRF3-227ENST00000600911 ZDHHC3Q9NYG2 299 aa22.71■■□□□ 1.23
IRF3-227ENST00000600911 FETUBQ9UGM5 382 aa22.71■■□□□ 1.23
IRF3-227ENST00000600911 SLC24A2Q9UI40 661 aa22.71■■□□□ 1.23
IRF3-227ENST00000600911 MED16Q9Y2X0 877 aa22.71■■□□□ 1.23
IRF3-227ENST00000600911 SPAG17Q6Q759 2223 aa22.71■■□□□ 1.23
IRF3-227ENST00000600911 LRP4O75096 1905 aa22.7■■□□□ 1.23
IRF3-227ENST00000600911 UBA6A0AVT1 1052 aaPredicted RBP22.7■■□□□ 1.22
IRF3-227ENST00000600911 IQCF5A8MTL0 148 aa22.7■■□□□ 1.22
IRF3-227ENST00000600911 INHBAP08476 426 aa22.7■■□□□ 1.22
IRF3-227ENST00000600911 HNRNPA2B1P22626 353 aaKnown RBP22.7■■□□□ 1.22
IRF3-227ENST00000600911 PMLP29590 882 aa22.7■■□□□ 1.22
IRF3-227ENST00000600911 TRIM23P36406 574 aa22.7■■□□□ 1.22
IRF3-227ENST00000600911 PTGER3P43115 390 aa22.7■■□□□ 1.22
IRF3-227ENST00000600911 CD151P48509 253 aa22.7■■□□□ 1.22
IRF3-227ENST00000600911 TMED2Q15363 201 aa22.7■■□□□ 1.22
IRF3-227ENST00000600911 KRT71Q3SY84 523 aa22.7■■□□□ 1.22
IRF3-227ENST00000600911 ADAMTSL4Q6UY14 1074 aa22.7■■□□□ 1.22
IRF3-227ENST00000600911 KIAA0408Q6ZU52 694 aa22.7■■□□□ 1.22
IRF3-227ENST00000600911 ARMCX6Q7L4S7 300 aa22.7■■□□□ 1.22
IRF3-227ENST00000600911 DET1Q7L5Y6 550 aa22.7■■□□□ 1.22
IRF3-227ENST00000600911 TDRPQ86YL5 185 aa22.7■■□□□ 1.22
IRF3-227ENST00000600911 SPACA7Q96KW9 195 aa22.7■■□□□ 1.22
IRF3-227ENST00000600911 HSPA12BQ96MM6 686 aa22.7■■□□□ 1.22
IRF3-227ENST00000600911 TEX101Q9BY14 249 aa22.7■■□□□ 1.22
IRF3-227ENST00000600911 CAB39LQ9H9S4 337 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms