RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 PPM1HQ9ULR3 514 aa19.91■□□□□ 0.78
PNKP-214ENST00000600573 PDE4DIPQ5VU43 2346 aa19.9■□□□□ 0.78
PNKP-214ENST00000600573 GAPDHSO14556 408 aaPredicted RBP19.9■□□□□ 0.78
PNKP-214ENST00000600573 SBK3P0C264 359 aa19.9■□□□□ 0.78
PNKP-214ENST00000600573 ITGB7P26010 798 aa19.9■□□□□ 0.78
PNKP-214ENST00000600573 ACRV1P26436 265 aa19.9■□□□□ 0.78
PNKP-214ENST00000600573 SERPINB3P29508 390 aa19.9■□□□□ 0.78
PNKP-214ENST00000600573 SERPINB5P36952 375 aa19.9■□□□□ 0.78
PNKP-214ENST00000600573 GRIN2CQ14957 1233 aa19.9■□□□□ 0.78
PNKP-214ENST00000600573 CRY1Q16526 586 aa19.9■□□□□ 0.78
PNKP-214ENST00000600573 TECRLQ5HYJ1 363 aa19.9■□□□□ 0.78
PNKP-214ENST00000600573 FAM91A1Q658Y4 838 aa19.9■□□□□ 0.78
PNKP-214ENST00000600573 SERPINA9Q86WD7 417 aa19.9■□□□□ 0.78
PNKP-214ENST00000600573 RHEBL1Q8TAI7 183 aa19.9■□□□□ 0.78
PNKP-214ENST00000600573 GATA5Q9BWX5 397 aaPredicted RBP19.9■□□□□ 0.78
PNKP-214ENST00000600573 CLPBQ9H078 707 aa19.9■□□□□ 0.78
PNKP-214ENST00000600573 RASSF4Q9H2L5 321 aa19.9■□□□□ 0.78
PNKP-214ENST00000600573 PCDH12Q9NPG4 1184 aa19.9■□□□□ 0.78
PNKP-214ENST00000600573 TRPV5Q9NQA5 729 aa19.9■□□□□ 0.78
PNKP-214ENST00000600573 CRLS1Q9UJA2 301 aa19.9■□□□□ 0.78
PNKP-214ENST00000600573 GNPTGQ9UJJ9 305 aa19.9■□□□□ 0.78
PNKP-214ENST00000600573 OAS3Q9Y6K5 1087 aaKnown RBP19.9■□□□□ 0.78
PNKP-214ENST00000600573 C1QTNF3-AMACRE9PGA6 284 aa19.89■□□□□ 0.77
PNKP-214ENST00000600573 H0Y858 1186 aa19.89■□□□□ 0.77
PNKP-214ENST00000600573 HNRNPCL1O60812 293 aaKnown RBP19.89■□□□□ 0.77
PNKP-214ENST00000600573 ALOX15P16050 662 aaPredicted RBP19.89■□□□□ 0.77
PNKP-214ENST00000600573 ZNF37AP17032 561 aaPredicted RBP19.89■□□□□ 0.77
PNKP-214ENST00000600573 LHCGRP22888 699 aa19.89■□□□□ 0.77
PNKP-214ENST00000600573 ATP5F1P24539 256 aaPredicted RBP19.89■□□□□ 0.77
PNKP-214ENST00000600573 CDKN1CP49918 316 aaPredicted RBP19.89■□□□□ 0.77
PNKP-214ENST00000600573 DNAJB13P59910 316 aa19.89■□□□□ 0.77
PNKP-214ENST00000600573 ELP6Q0PNE2 266 aa19.89■□□□□ 0.77
PNKP-214ENST00000600573 HTR4Q13639 388 aa19.89■□□□□ 0.77
PNKP-214ENST00000600573 CHRNA6Q15825 494 aa19.89■□□□□ 0.77
PNKP-214ENST00000600573 SLC22A9Q8IVM8 553 aa19.89■□□□□ 0.77
PNKP-214ENST00000600573 NRSN1Q8IZ57 195 aa19.89■□□□□ 0.77
PNKP-214ENST00000600573 KCNV2Q8TDN2 545 aa19.89■□□□□ 0.77
PNKP-214ENST00000600573 TUBB6Q9BUF5 446 aa19.89■□□□□ 0.77
PNKP-214ENST00000600573 TFB2MQ9H5Q4 396 aaKnown RBP19.89■□□□□ 0.77
PNKP-214ENST00000600573 DNAJC28Q9NX36 388 aa19.89■□□□□ 0.77
PNKP-214ENST00000600573 CDH23Q9H251 3354 aa19.89■□□□□ 0.77
PNKP-214ENST00000600573 PRSS56P0CW18 603 aa19.88■□□□□ 0.77
PNKP-214ENST00000600573 HK2P52789 917 aa19.88■□□□□ 0.77
PNKP-214ENST00000600573 TIAL1Q01085 375 aaKnown RBP eCLIP19.88■□□□□ 0.77
PNKP-214ENST00000600573 RCN2Q14257 317 aa19.88■□□□□ 0.77
PNKP-214ENST00000600573 FAM46CQ5VWP2 391 aa19.88■□□□□ 0.77
PNKP-214ENST00000600573 NAPRTQ6XQN6 538 aa19.88■□□□□ 0.77
PNKP-214ENST00000600573 NXPE1Q8N323 547 aa19.88■□□□□ 0.77
PNKP-214ENST00000600573 GPR26Q8NDV2 337 aa19.88■□□□□ 0.77
PNKP-214ENST00000600573 KLHL29Q96CT2 875 aa19.88■□□□□ 0.77
PNKP-214ENST00000600573 DERL2Q9GZP9 239 aa19.88■□□□□ 0.77
PNKP-214ENST00000600573 TTYH1Q9H313 450 aaPredicted RBP19.88■□□□□ 0.77
PNKP-214ENST00000600573 DYRK4Q9NR20 520 aa19.88■□□□□ 0.77
PNKP-214ENST00000600573 KLHL42Q9P2K6 505 aa19.88■□□□□ 0.77
PNKP-214ENST00000600573 TRMT6Q9UJA5 497 aaKnown RBP19.88■□□□□ 0.77
PNKP-214ENST00000600573 FNDC3AQ9Y2H6 1198 aaKnown RBP19.88■□□□□ 0.77
PNKP-214ENST00000600573 NUMBLQ9Y6R0 609 aa19.88■□□□□ 0.77
PNKP-214ENST00000600573 E5RI56 91 aa19.87■□□□□ 0.77
PNKP-214ENST00000600573 FCHO1O14526 889 aa19.87■□□□□ 0.77
PNKP-214ENST00000600573 DLX3O60479 287 aa19.87■□□□□ 0.77
PNKP-214ENST00000600573 CCDC22O60826 627 aa19.87■□□□□ 0.77
PNKP-214ENST00000600573 C1SP09871 688 aa19.87■□□□□ 0.77
PNKP-214ENST00000600573 ARRB2P32121 409 aa19.87■□□□□ 0.77
PNKP-214ENST00000600573 NSG1P42857 185 aa19.87■□□□□ 0.77
PNKP-214ENST00000600573 PFKPQ01813 784 aa19.87■□□□□ 0.77
PNKP-214ENST00000600573 MESP2Q0VG99 397 aa19.87■□□□□ 0.77
PNKP-214ENST00000600573 ENPP2Q13822 863 aa19.87■□□□□ 0.77
PNKP-214ENST00000600573 MACC1Q6ZN28 852 aa19.87■□□□□ 0.77
PNKP-214ENST00000600573 PIP4K2CQ8TBX8 421 aa19.87■□□□□ 0.77
PNKP-214ENST00000600573 RAB7BQ96AH8 199 aa19.87■□□□□ 0.77
PNKP-214ENST00000600573 DRC3Q9H069 523 aa19.87■□□□□ 0.77
PNKP-214ENST00000600573 FAM83DQ9H4H8 585 aa19.87■□□□□ 0.77
PNKP-214ENST00000600573 SMOXQ9NWM0 555 aa19.87■□□□□ 0.77
PNKP-214ENST00000600573 ZDHHC3Q9NYG2 299 aa19.87■□□□□ 0.77
PNKP-214ENST00000600573 A0A0U1RQS6 177 aa19.87■□□□□ 0.77
PNKP-214ENST00000600573 A8MX80 341 aa19.87■□□□□ 0.77
PNKP-214ENST00000600573 KPNA3O00505 521 aaPredicted RBP19.87■□□□□ 0.77
PNKP-214ENST00000600573 CD1DP15813 335 aa19.87■□□□□ 0.77
PNKP-214ENST00000600573 CHRM3P20309 590 aa19.87■□□□□ 0.77
PNKP-214ENST00000600573 IGFBP4P22692 258 aa19.87■□□□□ 0.77
PNKP-214ENST00000600573 ADGRE1Q14246 886 aa19.87■□□□□ 0.77
PNKP-214ENST00000600573 PTRHD1Q6GMV3 140 aaKnown RBP19.87■□□□□ 0.77
PNKP-214ENST00000600573 TMEM207Q6UWW9 146 aa19.87■□□□□ 0.77
PNKP-214ENST00000600573 ISCA2Q86U28 154 aa19.87■□□□□ 0.77
PNKP-214ENST00000600573 PIM3Q86V86 326 aa19.87■□□□□ 0.77
PNKP-214ENST00000600573 KIRREL3Q8IZU9 778 aa19.87■□□□□ 0.77
PNKP-214ENST00000600573 PLCD3Q8N3E9 789 aa19.87■□□□□ 0.77
PNKP-214ENST00000600573 SPATA6LQ8N4H0 392 aa19.87■□□□□ 0.77
PNKP-214ENST00000600573 PNPLA1Q8N8W4 532 aa19.87■□□□□ 0.77
PNKP-214ENST00000600573 ANKRD49Q8WVL7 239 aa19.87■□□□□ 0.77
PNKP-214ENST00000600573 PDLIM5Q96HC4 596 aaKnown RBP19.87■□□□□ 0.77
PNKP-214ENST00000600573 FAM129BQ96TA1 746 aa19.87■□□□□ 0.77
PNKP-214ENST00000600573 GAS2L1Q99501 681 aaPredicted RBP19.87■□□□□ 0.77
PNKP-214ENST00000600573 P2RY13Q9BPV8 354 aa19.87■□□□□ 0.77
PNKP-214ENST00000600573 SLC40A1Q9NP59 571 aa19.87■□□□□ 0.77
PNKP-214ENST00000600573 PNPOQ9NVS9 261 aa19.87■□□□□ 0.77
PNKP-214ENST00000600573 TMCO1Q9UM00 188 aa19.87■□□□□ 0.77
PNKP-214ENST00000600573 OR1I1O60431 355 aa19.86■□□□□ 0.77
PNKP-214ENST00000600573 NPHS1O60500 1241 aa19.86■□□□□ 0.77
PNKP-214ENST00000600573 TARSP26639 723 aaKnown RBP19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms