RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 SMYD5Q6GMV2 418 aa17.41■□□□□ 0.38
SSBP4-207ENST00000600244 PWWP2BQ6NUJ5 590 aa17.41■□□□□ 0.38
SSBP4-207ENST00000600244 HSD11B1LQ7Z5J1 315 aa17.41■□□□□ 0.38
SSBP4-207ENST00000600244 MMP21Q8N119 569 aa17.41■□□□□ 0.38
SSBP4-207ENST00000600244 KLHL6Q8WZ60 621 aa17.41■□□□□ 0.38
SSBP4-207ENST00000600244 C18orf8Q96DM3 657 aa17.41■□□□□ 0.38
SSBP4-207ENST00000600244 NSMCE3Q96MG7 304 aa17.41■□□□□ 0.38
SSBP4-207ENST00000600244 FCRL4Q96PJ5 515 aa17.41■□□□□ 0.38
SSBP4-207ENST00000600244 LATS2Q9NRM7 1088 aa17.41■□□□□ 0.38
SSBP4-207ENST00000600244 IFNKQ9P0W0 207 aa17.41■□□□□ 0.38
SSBP4-207ENST00000600244 MDC1Q14676 2089 aaKnown RBP17.4■□□□□ 0.38
SSBP4-207ENST00000600244 HEXIM1O94992 359 aaKnown RBP17.4■□□□□ 0.38
SSBP4-207ENST00000600244 SOD1P00441 154 aa17.4■□□□□ 0.38
SSBP4-207ENST00000600244 KRT9P35527 623 aa17.4■□□□□ 0.38
SSBP4-207ENST00000600244 KLK7P49862 253 aa17.4■□□□□ 0.38
SSBP4-207ENST00000600244 ATP11AP98196 1134 aa17.4■□□□□ 0.38
SSBP4-207ENST00000600244 PARP15Q460N3 678 aa17.4■□□□□ 0.38
SSBP4-207ENST00000600244 RAET1GQ6H3X3 334 aa17.4■□□□□ 0.38
SSBP4-207ENST00000600244 IGFL3Q6UXB1 125 aa17.4■□□□□ 0.38
SSBP4-207ENST00000600244 ARCQ7LC44 396 aa17.4■□□□□ 0.38
SSBP4-207ENST00000600244 KCNMB4Q86W47 210 aa17.4■□□□□ 0.38
SSBP4-207ENST00000600244 SHC3Q92529 594 aa17.4■□□□□ 0.38
SSBP4-207ENST00000600244 SPOCK2Q92563 424 aa17.4■□□□□ 0.38
SSBP4-207ENST00000600244 TGM7Q96PF1 710 aa17.4■□□□□ 0.38
SSBP4-207ENST00000600244 NAA15Q9BXJ9 866 aaKnown RBP17.4■□□□□ 0.38
SSBP4-207ENST00000600244 TRIM8Q9BZR9 551 aa17.4■□□□□ 0.38
SSBP4-207ENST00000600244 XPO4Q9C0E2 1151 aaKnown RBP17.4■□□□□ 0.38
SSBP4-207ENST00000600244 GANQ9H2C0 597 aa17.4■□□□□ 0.38
SSBP4-207ENST00000600244 UCK1Q9HA47 277 aa17.4■□□□□ 0.38
SSBP4-207ENST00000600244 CPNE7Q9UBL6 633 aa17.4■□□□□ 0.38
SSBP4-207ENST00000600244 CNOT8Q9UFF9 292 aaKnown RBP17.4■□□□□ 0.38
SSBP4-207ENST00000600244 AJAP1Q9UKB5 411 aaPredicted RBP17.4■□□□□ 0.38
SSBP4-207ENST00000600244 PCYT1BQ9Y5K3 369 aaPredicted RBP17.4■□□□□ 0.38
SSBP4-207ENST00000600244 WASH4PA8MWX3 477 aa17.39■□□□□ 0.37
SSBP4-207ENST00000600244 E2F3O00716 465 aa17.39■□□□□ 0.37
SSBP4-207ENST00000600244 CDH5P33151 784 aaPredicted RBP17.39■□□□□ 0.37
SSBP4-207ENST00000600244 HDAC4P56524 1084 aa17.39■□□□□ 0.37
SSBP4-207ENST00000600244 DPTQ07507 201 aa17.39■□□□□ 0.37
SSBP4-207ENST00000600244 BCL2L1Q07817 233 aa17.39■□□□□ 0.37
SSBP4-207ENST00000600244 VWA5B1Q5TIE3 1220 aa17.39■□□□□ 0.37
SSBP4-207ENST00000600244 ZNF517Q6ZMY9 492 aaPredicted RBP17.39■□□□□ 0.37
SSBP4-207ENST00000600244 Q6ZVL8 140 aa17.39■□□□□ 0.37
SSBP4-207ENST00000600244 MED25Q71SY5 747 aa17.39■□□□□ 0.37
SSBP4-207ENST00000600244 MARK2Q7KZI7 788 aaKnown RBP17.39■□□□□ 0.37
SSBP4-207ENST00000600244 PRSS42Q7Z5A4 293 aa17.39■□□□□ 0.37
SSBP4-207ENST00000600244 GALNT13Q8IUC8 556 aa17.39■□□□□ 0.37
SSBP4-207ENST00000600244 ZNF295-AS1Q8N0V1 137 aa17.39■□□□□ 0.37
SSBP4-207ENST00000600244 ARFGAP1Q8N6T3 406 aa17.39■□□□□ 0.37
SSBP4-207ENST00000600244 TMEM102Q8N9M5 508 aaPredicted RBP17.39■□□□□ 0.37
SSBP4-207ENST00000600244 TSEN2Q8NCE0 465 aaKnown RBP17.39■□□□□ 0.37
SSBP4-207ENST00000600244 FNIP1Q8TF40 1166 aa17.39■□□□□ 0.37
SSBP4-207ENST00000600244 FAM81BQ96LP2 452 aa17.39■□□□□ 0.37
SSBP4-207ENST00000600244 HERPUD2Q9BSE4 406 aa17.39■□□□□ 0.37
SSBP4-207ENST00000600244 AGPAT4Q9NRZ5 378 aa17.39■□□□□ 0.37
SSBP4-207ENST00000600244 PCDHGA10Q9Y5H3 936 aa17.39■□□□□ 0.37
SSBP4-207ENST00000600244 ZGRF1Q86YA3 2104 aa17.39■□□□□ 0.37
SSBP4-207ENST00000600244 KIR2DS5A0A0G2JLQ3 304 aa17.38■□□□□ 0.37
SSBP4-207ENST00000600244 A0A0G2JNG1 304 aa17.38■□□□□ 0.37
SSBP4-207ENST00000600244 J3KR12 359 aa17.38■□□□□ 0.37
SSBP4-207ENST00000600244 KIR2DS3K7RE56 304 aa17.38■□□□□ 0.37
SSBP4-207ENST00000600244 EPHB6O15197 1021 aa17.38■□□□□ 0.37
SSBP4-207ENST00000600244 KIF1CO43896 1103 aaKnown RBP17.38■□□□□ 0.37
SSBP4-207ENST00000600244 UCHL3P15374 230 aa17.38■□□□□ 0.37
SSBP4-207ENST00000600244 TYRP1P17643 537 aa17.38■□□□□ 0.37
SSBP4-207ENST00000600244 CLCN1P35523 988 aa17.38■□□□□ 0.37
SSBP4-207ENST00000600244 UBE2IP63279 158 aaKnown RBP17.38■□□□□ 0.37
SSBP4-207ENST00000600244 KIR2DS5Q14953 304 aa17.38■□□□□ 0.37
SSBP4-207ENST00000600244 IZUMO3Q5VZ72 239 aa17.38■□□□□ 0.37
SSBP4-207ENST00000600244 ADAMTSL4Q6UY14 1074 aa17.38■□□□□ 0.37
SSBP4-207ENST00000600244 TRIM74Q86UV6 250 aa17.38■□□□□ 0.37
SSBP4-207ENST00000600244 UMODL1-AS1Q8N2C9 162 aa17.38■□□□□ 0.37
SSBP4-207ENST00000600244 SLC30A1Q9Y6M5 507 aa17.38■□□□□ 0.37
SSBP4-207ENST00000600244 GOLGA6CA6NDK9 693 aa17.37■□□□□ 0.37
SSBP4-207ENST00000600244 GOLGA6BA6NDN3 693 aa17.37■□□□□ 0.37
SSBP4-207ENST00000600244 F5H423 210 aaPredicted RBP17.37■□□□□ 0.37
SSBP4-207ENST00000600244 PRAMEF11O60813 436 aa17.37■□□□□ 0.37
SSBP4-207ENST00000600244 STSP08842 583 aa17.37■□□□□ 0.37
SSBP4-207ENST00000600244 GOLGA6DP0CG33 693 aa17.37■□□□□ 0.37
SSBP4-207ENST00000600244 F3P13726 295 aa17.37■□□□□ 0.37
SSBP4-207ENST00000600244 BPIP17213 487 aa17.37■□□□□ 0.37
SSBP4-207ENST00000600244 NELFEP18615 380 aaKnown RBP17.37■□□□□ 0.37
SSBP4-207ENST00000600244 LHCGRP22888 699 aa17.37■□□□□ 0.37
SSBP4-207ENST00000600244 VIPR1P32241 457 aa17.37■□□□□ 0.37
SSBP4-207ENST00000600244 GPR1P46091 355 aa17.37■□□□□ 0.37
SSBP4-207ENST00000600244 RAPSNQ13702 412 aa17.37■□□□□ 0.37
SSBP4-207ENST00000600244 DENND2CQ68D51 928 aa17.37■□□□□ 0.37
SSBP4-207ENST00000600244 CYB5D1Q6P9G0 228 aa17.37■□□□□ 0.37
SSBP4-207ENST00000600244 Q6ZS92 163 aa17.37■□□□□ 0.37
SSBP4-207ENST00000600244 TECPR1Q7Z6L1 1165 aa17.37■□□□□ 0.37
SSBP4-207ENST00000600244 LZTR1Q8N653 840 aa17.37■□□□□ 0.37
SSBP4-207ENST00000600244 ILKAPQ9H0C8 392 aaPredicted RBP17.37■□□□□ 0.37
SSBP4-207ENST00000600244 PDE7BQ9NP56 450 aa17.37■□□□□ 0.37
SSBP4-207ENST00000600244 GOLGA6AQ9NYA3 693 aa17.37■□□□□ 0.37
SSBP4-207ENST00000600244 DNAJC12Q9UKB3 198 aa17.37■□□□□ 0.37
SSBP4-207ENST00000600244 RARRES3Q9UL19 164 aa17.37■□□□□ 0.37
SSBP4-207ENST00000600244 FHOD1Q9Y613 1164 aa17.37■□□□□ 0.37
SSBP4-207ENST00000600244 A0A1B0GUH1 482 aa17.36■□□□□ 0.37
SSBP4-207ENST00000600244 OR5K4A6NMS3 321 aa17.36■□□□□ 0.37
SSBP4-207ENST00000600244 GOLGA8SH3BPF8 625 aa17.36■□□□□ 0.37
SSBP4-207ENST00000600244 PSMD11O00231 422 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms