RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 HIF1AQ16665 826 aa18.72■□□□□ 0.59
CCDC9-205ENST00000600117 TEX35Q5T0J7 233 aa18.72■□□□□ 0.59
CCDC9-205ENST00000600117 ZDHHC20Q5W0Z9 365 aa18.72■□□□□ 0.59
CCDC9-205ENST00000600117 RAET1GQ6H3X3 334 aa18.72■□□□□ 0.59
CCDC9-205ENST00000600117 IQCHQ86VS3 1027 aa18.72■□□□□ 0.59
CCDC9-205ENST00000600117 PDIK1LQ8N165 341 aa18.72■□□□□ 0.59
CCDC9-205ENST00000600117 TRAM1L1Q8N609 369 aa18.72■□□□□ 0.59
CCDC9-205ENST00000600117 OR13H1Q8NG92 308 aa18.72■□□□□ 0.59
CCDC9-205ENST00000600117 PEX13Q92968 403 aa18.72■□□□□ 0.59
CCDC9-205ENST00000600117 CDKN2AIPNLQ96HQ2 116 aa18.72■□□□□ 0.59
CCDC9-205ENST00000600117 RHOXF2Q9BQY4 288 aa18.72■□□□□ 0.59
CCDC9-205ENST00000600117 TRIM56Q9BRZ2 755 aaKnown RBP18.72■□□□□ 0.59
CCDC9-205ENST00000600117 CCDC86Q9H6F5 360 aaKnown RBP18.72■□□□□ 0.59
CCDC9-205ENST00000600117 CAPN10Q9HC96 672 aa18.72■□□□□ 0.59
CCDC9-205ENST00000600117 FSCN3Q9NQT6 498 aa18.72■□□□□ 0.59
CCDC9-205ENST00000600117 GDF3Q9NR23 364 aa18.72■□□□□ 0.59
CCDC9-205ENST00000600117 FAM114A2Q9NRY5 505 aa18.72■□□□□ 0.59
CCDC9-205ENST00000600117 TOR1BO14657 336 aa18.71■□□□□ 0.59
CCDC9-205ENST00000600117 VILLO15195 856 aa18.71■□□□□ 0.59
CCDC9-205ENST00000600117 CD59P13987 128 aa18.71■□□□□ 0.59
CCDC9-205ENST00000600117 GNSP15586 552 aa18.71■□□□□ 0.59
CCDC9-205ENST00000600117 HADHAP40939 763 aa18.71■□□□□ 0.59
CCDC9-205ENST00000600117 GPR1P46091 355 aa18.71■□□□□ 0.59
CCDC9-205ENST00000600117 CSNK1EP49674 416 aaKnown RBP18.71■□□□□ 0.59
CCDC9-205ENST00000600117 AFF3P51826 1226 aaKnown RBP18.71■□□□□ 0.59
CCDC9-205ENST00000600117 BNC1Q01954 994 aa18.71■□□□□ 0.59
CCDC9-205ENST00000600117 CHRNA6Q15825 494 aa18.71■□□□□ 0.59
CCDC9-205ENST00000600117 SKIDA1Q1XH10 827 aa18.71■□□□□ 0.59
CCDC9-205ENST00000600117 BBS9Q3SYG4 887 aa18.71■□□□□ 0.59
CCDC9-205ENST00000600117 DNAJC21Q5F1R6 531 aaKnown RBP18.71■□□□□ 0.59
CCDC9-205ENST00000600117 TPRG1LQ5T0D9 272 aa18.71■□□□□ 0.59
CCDC9-205ENST00000600117 FAM151BQ6UXP7 276 aa18.71■□□□□ 0.59
CCDC9-205ENST00000600117 ADAMTSL4Q6UY14 1074 aa18.71■□□□□ 0.59
CCDC9-205ENST00000600117 Q6ZSR6 202 aa18.71■□□□□ 0.59
CCDC9-205ENST00000600117 RABEPKQ7Z6M1 372 aa18.71■□□□□ 0.59
CCDC9-205ENST00000600117 IGDCC3Q8IVU1 814 aa18.71■□□□□ 0.59
CCDC9-205ENST00000600117 MINDY1Q8N5J2 469 aa18.71■□□□□ 0.59
CCDC9-205ENST00000600117 FAM174AQ8TBP5 190 aa18.71■□□□□ 0.59
CCDC9-205ENST00000600117 ADAMTS14Q8WXS8 1223 aa18.71■□□□□ 0.59
CCDC9-205ENST00000600117 TBATAQ96M53 351 aa18.71■□□□□ 0.59
CCDC9-205ENST00000600117 ZSCAN5AQ9BUG6 496 aa18.71■□□□□ 0.59
CCDC9-205ENST00000600117 APOOQ9BUR5 198 aa18.71■□□□□ 0.59
CCDC9-205ENST00000600117 SPATA16Q9BXB7 569 aa18.71■□□□□ 0.59
CCDC9-205ENST00000600117 TEX101Q9BY14 249 aa18.71■□□□□ 0.59
CCDC9-205ENST00000600117 TMPRSS11EQ9UL52 423 aa18.71■□□□□ 0.59
CCDC9-205ENST00000600117 CNOT6Q9ULM6 557 aaKnown RBP18.71■□□□□ 0.59
CCDC9-205ENST00000600117 FNDC3AQ9Y2H6 1198 aaKnown RBP18.71■□□□□ 0.59
CCDC9-205ENST00000600117 TENM4Q6N022 2769 aa18.71■□□□□ 0.59
CCDC9-205ENST00000600117 GLYATL1P3A0A0U1RQE8 302 aa18.7■□□□□ 0.58
CCDC9-205ENST00000600117 FAM237BA0A1B0GVD1 139 aa18.7■□□□□ 0.58
CCDC9-205ENST00000600117 PYGLP06737 847 aa18.7■□□□□ 0.58
CCDC9-205ENST00000600117 THEGLP0DJG4 465 aa18.7■□□□□ 0.58
CCDC9-205ENST00000600117 ECHS1P30084 290 aa18.7■□□□□ 0.58
CCDC9-205ENST00000600117 CA5AP35218 305 aa18.7■□□□□ 0.58
CCDC9-205ENST00000600117 RABIFP47224 123 aa18.7■□□□□ 0.58
CCDC9-205ENST00000600117 YPEL5P62699 121 aa18.7■□□□□ 0.58
CCDC9-205ENST00000600117 OVGP1Q12889 678 aa18.7■□□□□ 0.58
CCDC9-205ENST00000600117 PDPK2PQ6A1A2 396 aa18.7■□□□□ 0.58
CCDC9-205ENST00000600117 CASC4Q6P4E1 433 aa18.7■□□□□ 0.58
CCDC9-205ENST00000600117 CES3Q6UWW8 571 aa18.7■□□□□ 0.58
CCDC9-205ENST00000600117 PTAR1Q7Z6K3 402 aaPredicted RBP18.7■□□□□ 0.58
CCDC9-205ENST00000600117 TMEM135Q86UB9 458 aa18.7■□□□□ 0.58
CCDC9-205ENST00000600117 HEATR4Q86WZ0 1026 aa18.7■□□□□ 0.58
CCDC9-205ENST00000600117 NAV2Q8IVL1 2488 aa18.7■□□□□ 0.58
CCDC9-205ENST00000600117 SLC22A18ASQ8N1D0 253 aa18.7■□□□□ 0.58
CCDC9-205ENST00000600117 FUBP1Q96AE4 644 aaKnown RBP18.7■□□□□ 0.58
CCDC9-205ENST00000600117 MFSD3Q96ES6 412 aa18.7■□□□□ 0.58
CCDC9-205ENST00000600117 STAMBPL1Q96FJ0 436 aa18.7■□□□□ 0.58
CCDC9-205ENST00000600117 KLHDC7BQ96G42 594 aa18.7■□□□□ 0.58
CCDC9-205ENST00000600117 BBC3Q96PG8 261 aaPredicted RBP18.7■□□□□ 0.58
CCDC9-205ENST00000600117 EBNA1BP2Q99848 306 aaKnown RBP18.7■□□□□ 0.58
CCDC9-205ENST00000600117 LGR4Q9BXB1 951 aa18.7■□□□□ 0.58
CCDC9-205ENST00000600117 FAM129AQ9BZQ8 928 aa18.7■□□□□ 0.58
CCDC9-205ENST00000600117 SUDS3Q9H7L9 328 aaPredicted RBP18.7■□□□□ 0.58
CCDC9-205ENST00000600117 PLAC1Q9HBJ0 212 aa18.7■□□□□ 0.58
CCDC9-205ENST00000600117 DNAAF2Q9NVR5 837 aaKnown RBP18.7■□□□□ 0.58
CCDC9-205ENST00000600117 OR1A2Q9Y585 309 aa18.7■□□□□ 0.58
CCDC9-205ENST00000600117 TEX264Q9Y6I9 313 aa18.7■□□□□ 0.58
CCDC9-205ENST00000600117 GOLGA4Q13439 2230 aaKnown RBP18.7■□□□□ 0.58
CCDC9-205ENST00000600117 PTPRBP23467 1997 aa18.7■□□□□ 0.58
CCDC9-205ENST00000600117 A0A1B0GVT2 93 aa18.69■□□□□ 0.58
CCDC9-205ENST00000600117 MAGEB16A2A368 324 aa18.69■□□□□ 0.58
CCDC9-205ENST00000600117 CCDC162PA2VCL2 907 aa18.69■□□□□ 0.58
CCDC9-205ENST00000600117 ARHGAP33O14559 1287 aa18.69■□□□□ 0.58
CCDC9-205ENST00000600117 GPR39O43194 453 aa18.69■□□□□ 0.58
CCDC9-205ENST00000600117 UGT1A9O60656 530 aa18.69■□□□□ 0.58
CCDC9-205ENST00000600117 SRP72O76094 671 aaKnown RBP18.69■□□□□ 0.58
CCDC9-205ENST00000600117 HOXC4P09017 264 aaPredicted RBP18.69■□□□□ 0.58
CCDC9-205ENST00000600117 UGT1A6P19224 532 aa18.69■□□□□ 0.58
CCDC9-205ENST00000600117 UGT1A1P22309 533 aa18.69■□□□□ 0.58
CCDC9-205ENST00000600117 UGT1A4P22310 534 aa18.69■□□□□ 0.58
CCDC9-205ENST00000600117 ARNTP27540 789 aa18.69■□□□□ 0.58
CCDC9-205ENST00000600117 UGT1A3P35503 534 aa18.69■□□□□ 0.58
CCDC9-205ENST00000600117 UGT1A5P35504 534 aa18.69■□□□□ 0.58
CCDC9-205ENST00000600117 ELK3P41970 407 aa18.69■□□□□ 0.58
CCDC9-205ENST00000600117 CARSP49589 748 aaKnown RBP18.69■□□□□ 0.58
CCDC9-205ENST00000600117 KIAA1024LP59773 190 aa18.69■□□□□ 0.58
CCDC9-205ENST00000600117 CDK3Q00526 305 aa18.69■□□□□ 0.58
CCDC9-205ENST00000600117 PDIA2Q13087 525 aaKnown RBP18.69■□□□□ 0.58
CCDC9-205ENST00000600117 SLC14A1Q13336 389 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms