RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 NKAIN2Q5VXU1 208 aa14.92□□□□□ -0.02
LIG1-215ENST00000597901 GPR155Q7Z3F1 870 aa14.92□□□□□ -0.02
LIG1-215ENST00000597901 SLC25A41Q8N5S1 370 aa14.92□□□□□ -0.02
LIG1-215ENST00000597901 TMEM159Q96B96 161 aa14.92□□□□□ -0.02
LIG1-215ENST00000597901 CCDC97Q96F63 343 aaPredicted RBP14.92□□□□□ -0.02
LIG1-215ENST00000597901 OXNAD1Q96HP4 312 aaPredicted RBP14.92□□□□□ -0.02
LIG1-215ENST00000597901 MRGPRX2Q96LB1 330 aa14.92□□□□□ -0.02
LIG1-215ENST00000597901 FCRL3Q96P31 734 aaPredicted RBP14.92□□□□□ -0.02
LIG1-215ENST00000597901 BBC3Q96PG8 261 aaPredicted RBP14.92□□□□□ -0.02
LIG1-215ENST00000597901 HERPUD2Q9BSE4 406 aa14.92□□□□□ -0.02
LIG1-215ENST00000597901 ZSCAN5AQ9BUG6 496 aa14.92□□□□□ -0.02
LIG1-215ENST00000597901 OR2AG1Q9H205 316 aa14.92□□□□□ -0.02
LIG1-215ENST00000597901 C10orf88Q9H8K7 445 aa14.92□□□□□ -0.02
LIG1-215ENST00000597901 BPIFA1Q9NP55 256 aa14.92□□□□□ -0.02
LIG1-215ENST00000597901 NFKBIL1Q9UBC1 381 aaPredicted RBP14.92□□□□□ -0.02
LIG1-215ENST00000597901 TBC1D29Q9UFV1 150 aa14.92□□□□□ -0.02
LIG1-215ENST00000597901 EFR3BQ9Y2G0 817 aa14.92□□□□□ -0.02
LIG1-215ENST00000597901 SSUH2Q9Y2M2 353 aa14.92□□□□□ -0.02
LIG1-215ENST00000597901 LOXL2Q9Y4K0 774 aa14.92□□□□□ -0.02
LIG1-215ENST00000597901 F5H423 210 aaPredicted RBP14.91□□□□□ -0.02
LIG1-215ENST00000597901 H7C0C1 242 aa14.91□□□□□ -0.02
LIG1-215ENST00000597901 APOC4-APOC2K7ER74 178 aa14.91□□□□□ -0.02
LIG1-215ENST00000597901 APOC2P02655 101 aa14.91□□□□□ -0.02
LIG1-215ENST00000597901 SLC4A1P02730 911 aa14.91□□□□□ -0.02
LIG1-215ENST00000597901 JMJD7P0C870 316 aa14.91□□□□□ -0.02
LIG1-215ENST00000597901 ACP5P13686 325 aa14.91□□□□□ -0.02
LIG1-215ENST00000597901 CTNNA2P26232 953 aa14.91□□□□□ -0.02
LIG1-215ENST00000597901 RBL1P28749 1068 aa14.91□□□□□ -0.02
LIG1-215ENST00000597901 SLC5A2P31639 672 aa14.91□□□□□ -0.02
LIG1-215ENST00000597901 ATP5OP48047 213 aa14.91□□□□□ -0.02
LIG1-215ENST00000597901 CXADRP78310 365 aa14.91□□□□□ -0.02
LIG1-215ENST00000597901 NOMO1Q15155 1222 aa14.91□□□□□ -0.02
LIG1-215ENST00000597901 PHF19Q5T6S3 580 aa14.91□□□□□ -0.02
LIG1-215ENST00000597901 CCDC181Q5TID7 509 aa14.91□□□□□ -0.02
LIG1-215ENST00000597901 PDPK2PQ6A1A2 396 aa14.91□□□□□ -0.02
LIG1-215ENST00000597901 IYDQ6PHW0 289 aa14.91□□□□□ -0.02
LIG1-215ENST00000597901 ADGRG6Q86SQ4 1221 aa14.91□□□□□ -0.02
LIG1-215ENST00000597901 SFRP1Q8N474 314 aa14.91□□□□□ -0.02
LIG1-215ENST00000597901 ACRBPQ8NEB7 543 aa14.91□□□□□ -0.02
LIG1-215ENST00000597901 GLYATL1Q969I3 302 aa14.91□□□□□ -0.02
LIG1-215ENST00000597901 QKIQ96PU8 341 aaKnown RBP eCLIP14.91□□□□□ -0.02
LIG1-215ENST00000597901 CMKLR1Q99788 373 aa14.91□□□□□ -0.02
LIG1-215ENST00000597901 BAG1Q99933 345 aaPredicted RBP14.91□□□□□ -0.02
LIG1-215ENST00000597901 NUDT22Q9BRQ3 303 aa14.91□□□□□ -0.02
LIG1-215ENST00000597901 OSBPL8Q9BZF1 889 aa14.91□□□□□ -0.02
LIG1-215ENST00000597901 TRABDQ9H4I3 376 aa14.91□□□□□ -0.02
LIG1-215ENST00000597901 PISDQ9UG56 409 aa14.91□□□□□ -0.02
LIG1-215ENST00000597901 KCNK6Q9Y257 313 aa14.91□□□□□ -0.02
LIG1-215ENST00000597901 PCDHGA7Q9Y5G6 932 aa14.91□□□□□ -0.02
LIG1-215ENST00000597901 LRP4O75096 1905 aa14.91□□□□□ -0.02
LIG1-215ENST00000597901 ZFYVE26Q68DK2 2539 aa14.9□□□□□ -0.02
LIG1-215ENST00000597901 IGHV1OR21-1A0A087WYE8 117 aa14.9□□□□□ -0.02
LIG1-215ENST00000597901 IGHV5-10-1A0A0J9YXX1 117 aa14.9□□□□□ -0.02
LIG1-215ENST00000597901 CCDC66A2RUB6 948 aa14.9□□□□□ -0.02
LIG1-215ENST00000597901 NVLO15381 856 aaKnown RBP14.9□□□□□ -0.02
LIG1-215ENST00000597901 SNX2O60749 519 aa14.9□□□□□ -0.02
LIG1-215ENST00000597901 PYGMP11217 842 aa14.9□□□□□ -0.02
LIG1-215ENST00000597901 HMGCLP35914 325 aa14.9□□□□□ -0.02
LIG1-215ENST00000597901 CHRNA4P43681 627 aa14.9□□□□□ -0.02
LIG1-215ENST00000597901 FASLGP48023 281 aa14.9□□□□□ -0.02
LIG1-215ENST00000597901 CLCNKAP51800 687 aa14.9□□□□□ -0.02
LIG1-215ENST00000597901 VAV2P52735 878 aa14.9□□□□□ -0.02
LIG1-215ENST00000597901 UCNP55089 124 aa14.9□□□□□ -0.02
LIG1-215ENST00000597901 RWDD2BP57060 319 aa14.9□□□□□ -0.02
LIG1-215ENST00000597901 CFHR1Q03591 330 aa14.9□□□□□ -0.02
LIG1-215ENST00000597901 MPP3Q13368 585 aa14.9□□□□□ -0.02
LIG1-215ENST00000597901 C16orf72Q14CZ0 275 aa14.9□□□□□ -0.02
LIG1-215ENST00000597901 MAP9Q49MG5 647 aa14.9□□□□□ -0.02
LIG1-215ENST00000597901 ZNF569Q5MCW4 686 aa14.9□□□□□ -0.02
LIG1-215ENST00000597901 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.9□□□□□ -0.02
LIG1-215ENST00000597901 JAMLQ86YT9 394 aa14.9□□□□□ -0.02
LIG1-215ENST00000597901 TTC30BQ8N4P2 665 aa14.9□□□□□ -0.02
LIG1-215ENST00000597901 IPMKQ8NFU5 416 aa14.9□□□□□ -0.02
LIG1-215ENST00000597901 ACTL9Q8TC94 416 aa14.9□□□□□ -0.02
LIG1-215ENST00000597901 SLC37A2Q8TED4 501 aa14.9□□□□□ -0.02
LIG1-215ENST00000597901 SLC38A3Q99624 504 aa14.9□□□□□ -0.02
LIG1-215ENST00000597901 CPNE5Q9HCH3 593 aa14.9□□□□□ -0.02
LIG1-215ENST00000597901 KCNK4Q9NYG8 393 aa14.9□□□□□ -0.02
LIG1-215ENST00000597901 TMPRSS11EQ9UL52 423 aa14.9□□□□□ -0.02
LIG1-215ENST00000597901 ADGRG1Q9Y653 693 aa14.9□□□□□ -0.02
LIG1-215ENST00000597901 COL27A1Q8IZC6 1860 aaPredicted RBP14.9□□□□□ -0.02
LIG1-215ENST00000597901 TEX51A0A1B0GUA7 166 aa14.89□□□□□ -0.03
LIG1-215ENST00000597901 A6NCN8 305 aa14.89□□□□□ -0.03
LIG1-215ENST00000597901 GPR89AB7ZAQ6 455 aa14.89□□□□□ -0.03
LIG1-215ENST00000597901 CHUKO15111 745 aa14.89□□□□□ -0.03
LIG1-215ENST00000597901 AGTP01019 485 aa14.89□□□□□ -0.03
LIG1-215ENST00000597901 GPR89BP0CG08 455 aa14.89□□□□□ -0.03
LIG1-215ENST00000597901 ITIH1P19827 911 aa14.89□□□□□ -0.03
LIG1-215ENST00000597901 PTPN7P35236 360 aa14.89□□□□□ -0.03
LIG1-215ENST00000597901 ETV5P41161 510 aa14.89□□□□□ -0.03
LIG1-215ENST00000597901 CETN2P41208 172 aa14.89□□□□□ -0.03
LIG1-215ENST00000597901 TNNT3P45378 269 aaPredicted RBP14.89□□□□□ -0.03
LIG1-215ENST00000597901 LIMK2P53671 638 aa14.89□□□□□ -0.03
LIG1-215ENST00000597901 TMPRSS3P57727 454 aa14.89□□□□□ -0.03
LIG1-215ENST00000597901 OTUD4Q01804 1114 aaKnown RBP14.89□□□□□ -0.03
LIG1-215ENST00000597901 CLN3Q13286 438 aa14.89□□□□□ -0.03
LIG1-215ENST00000597901 SLC1A5Q15758 541 aa14.89□□□□□ -0.03
LIG1-215ENST00000597901 AADACL2Q6P093 401 aa14.89□□□□□ -0.03
LIG1-215ENST00000597901 KIAA1328Q86T90 577 aa14.89□□□□□ -0.03
LIG1-215ENST00000597901 ZNF761Q86XN6 746 aaPredicted RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms