RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 F9P00740 461 aa12.83□□□□□ -0.36
SCAF1-202ENST00000595242 IFNB1P01574 187 aa12.83□□□□□ -0.36
SCAF1-202ENST00000595242 PRNPP04156 253 aa12.83□□□□□ -0.36
SCAF1-202ENST00000595242 SRCP12931 536 aa12.83□□□□□ -0.36
SCAF1-202ENST00000595242 LIFP15018 202 aa12.83□□□□□ -0.36
SCAF1-202ENST00000595242 ARL4AP40617 200 aa12.83□□□□□ -0.36
SCAF1-202ENST00000595242 MAGEA4P43358 317 aa12.83□□□□□ -0.36
SCAF1-202ENST00000595242 HCAR3P49019 387 aa12.83□□□□□ -0.36
SCAF1-202ENST00000595242 ATP1A2P50993 1020 aa12.83□□□□□ -0.36
SCAF1-202ENST00000595242 MLLT10P55197 1068 aa12.83□□□□□ -0.36
SCAF1-202ENST00000595242 PFN3P60673 137 aa12.83□□□□□ -0.36
SCAF1-202ENST00000595242 PPP2R2AP63151 447 aa12.83□□□□□ -0.36
SCAF1-202ENST00000595242 PITX1P78337 314 aaPredicted RBP12.83□□□□□ -0.36
SCAF1-202ENST00000595242 DEUP1Q05D60 604 aa12.83□□□□□ -0.36
SCAF1-202ENST00000595242 SGCGQ13326 291 aa12.83□□□□□ -0.36
SCAF1-202ENST00000595242 AUHQ13825 339 aaKnown RBP12.83□□□□□ -0.36
SCAF1-202ENST00000595242 KCNJ11Q14654 390 aa12.83□□□□□ -0.36
SCAF1-202ENST00000595242 RASA2Q15283 850 aa12.83□□□□□ -0.36
SCAF1-202ENST00000595242 ARSIQ5FYB1 569 aa12.83□□□□□ -0.36
SCAF1-202ENST00000595242 FHL5Q5TD97 284 aa12.83□□□□□ -0.36
SCAF1-202ENST00000595242 SYPL2Q5VXT5 272 aa12.83□□□□□ -0.36
SCAF1-202ENST00000595242 NCBP2-AS2Q69YL0 99 aa12.83□□□□□ -0.36
SCAF1-202ENST00000595242 DARS2Q6PI48 645 aaKnown RBP12.83□□□□□ -0.36
SCAF1-202ENST00000595242 CENPUQ71F23 418 aa12.83□□□□□ -0.36
SCAF1-202ENST00000595242 RIBC1Q8N443 379 aaPredicted RBP12.83□□□□□ -0.36
SCAF1-202ENST00000595242 IL22RA1Q8N6P7 574 aa12.83□□□□□ -0.36
SCAF1-202ENST00000595242 CHST14Q8NCH0 376 aa12.83□□□□□ -0.36
SCAF1-202ENST00000595242 OR52K2Q8NGK3 314 aa12.83□□□□□ -0.36
SCAF1-202ENST00000595242 GRIN3AQ8TCU5 1115 aa12.83□□□□□ -0.36
SCAF1-202ENST00000595242 SSC4DQ8WTU2 575 aa12.83□□□□□ -0.36
SCAF1-202ENST00000595242 SCG3Q8WXD2 468 aaKnown RBP12.83□□□□□ -0.36
SCAF1-202ENST00000595242 NKD1Q969G9 470 aa12.83□□□□□ -0.36
SCAF1-202ENST00000595242 BTN2A3PQ96KV6 586 aa12.83□□□□□ -0.36
SCAF1-202ENST00000595242 CATSPER2Q96P56 530 aa12.83□□□□□ -0.36
SCAF1-202ENST00000595242 LENG8Q96PV6 779 aaPredicted RBP12.83□□□□□ -0.36
SCAF1-202ENST00000595242 PHF12Q96QT6 1004 aa12.83□□□□□ -0.36
SCAF1-202ENST00000595242 B3GNT4Q9C0J1 378 aa12.83□□□□□ -0.36
SCAF1-202ENST00000595242 PPCSQ9HAB8 311 aa12.83□□□□□ -0.36
SCAF1-202ENST00000595242 EURLQ9NYK6 297 aa12.83□□□□□ -0.36
SCAF1-202ENST00000595242 CWC15Q9P013 229 aaKnown RBP12.83□□□□□ -0.36
SCAF1-202ENST00000595242 LGALS13Q9UHV8 139 aa12.83□□□□□ -0.36
SCAF1-202ENST00000595242 VPS28Q9UK41 221 aa12.83□□□□□ -0.36
SCAF1-202ENST00000595242 NOVA2Q9UNW9 492 aaKnown RBP12.83□□□□□ -0.36
SCAF1-202ENST00000595242 ANKRD36A6QL64 1941 aa12.82□□□□□ -0.36
SCAF1-202ENST00000595242 SHANK1Q9Y566 2161 aa12.82□□□□□ -0.36
SCAF1-202ENST00000595242 A1L4Q6 167 aa12.82□□□□□ -0.36
SCAF1-202ENST00000595242 H7C0C1 242 aa12.82□□□□□ -0.36
SCAF1-202ENST00000595242 RASGRF2O14827 1237 aa12.82□□□□□ -0.36
SCAF1-202ENST00000595242 IGLV3-25P01717 112 aa12.82□□□□□ -0.36
SCAF1-202ENST00000595242 IVLP07476 585 aa12.82□□□□□ -0.36
SCAF1-202ENST00000595242 CELA2BP08218 269 aaPredicted RBP12.82□□□□□ -0.36
SCAF1-202ENST00000595242 ADRB3P13945 408 aa12.82□□□□□ -0.36
SCAF1-202ENST00000595242 UQCRFS1P47985 274 aa12.82□□□□□ -0.36
SCAF1-202ENST00000595242 ATP5OP48047 213 aa12.82□□□□□ -0.36
SCAF1-202ENST00000595242 NEK3P51956 506 aa12.82□□□□□ -0.36
SCAF1-202ENST00000595242 EIF4EBP2Q13542 120 aaPredicted RBP12.82□□□□□ -0.36
SCAF1-202ENST00000595242 PAFAH1B3Q15102 231 aaKnown RBP12.82□□□□□ -0.36
SCAF1-202ENST00000595242 KYNUQ16719 465 aa12.82□□□□□ -0.36
SCAF1-202ENST00000595242 PPP6R3Q5H9R7 873 aaPredicted RBP12.82□□□□□ -0.36
SCAF1-202ENST00000595242 EFHC2Q5JST6 749 aa12.82□□□□□ -0.36
SCAF1-202ENST00000595242 TTC39BQ5VTQ0 682 aaPredicted RBP12.82□□□□□ -0.36
SCAF1-202ENST00000595242 ZNF787Q6DD87 383 aa12.82□□□□□ -0.36
SCAF1-202ENST00000595242 BZW1Q7L1Q6 419 aaKnown RBP12.82□□□□□ -0.36
SCAF1-202ENST00000595242 TAC4Q86UU9 113 aa12.82□□□□□ -0.36
SCAF1-202ENST00000595242 FAM131BQ86XD5 332 aa12.82□□□□□ -0.36
SCAF1-202ENST00000595242 TDRPQ86YL5 185 aa12.82□□□□□ -0.36
SCAF1-202ENST00000595242 CCNJLQ8IV13 435 aa12.82□□□□□ -0.36
SCAF1-202ENST00000595242 Q8N9G6 341 aaPredicted RBP12.82□□□□□ -0.36
SCAF1-202ENST00000595242 FAM71DQ8N9W8 422 aa12.82□□□□□ -0.36
SCAF1-202ENST00000595242 ATP11CQ8NB49 1132 aa12.82□□□□□ -0.36
SCAF1-202ENST00000595242 ABHD17AQ96GS6 310 aa12.82□□□□□ -0.36
SCAF1-202ENST00000595242 PPP1R16AQ96I34 528 aa12.82□□□□□ -0.36
SCAF1-202ENST00000595242 PWWP2AQ96N64 755 aa12.82□□□□□ -0.36
SCAF1-202ENST00000595242 EPAS1Q99814 870 aa12.82□□□□□ -0.36
SCAF1-202ENST00000595242 C1QTNF2Q9BXJ5 285 aa12.82□□□□□ -0.36
SCAF1-202ENST00000595242 CNOT10Q9H9A5 744 aaKnown RBP12.82□□□□□ -0.36
SCAF1-202ENST00000595242 PIGVQ9NUD9 493 aa12.82□□□□□ -0.36
SCAF1-202ENST00000595242 FETUBQ9UGM5 382 aa12.82□□□□□ -0.36
SCAF1-202ENST00000595242 IL36AQ9UHA7 158 aa12.82□□□□□ -0.36
SCAF1-202ENST00000595242 HS3ST2Q9Y278 367 aa12.82□□□□□ -0.36
SCAF1-202ENST00000595242 OR51B4Q9Y5P0 310 aa12.82□□□□□ -0.36
SCAF1-202ENST00000595242 FADS3Q9Y5Q0 445 aa12.82□□□□□ -0.36
SCAF1-202ENST00000595242 RNF215Q9Y6U7 377 aa12.82□□□□□ -0.36
SCAF1-202ENST00000595242 A0A087WUV0 522 aaPredicted RBP12.81□□□□□ -0.36
SCAF1-202ENST00000595242 IGLON5A6NGN9 336 aa12.81□□□□□ -0.36
SCAF1-202ENST00000595242 PRR19A6NJB7 356 aa12.81□□□□□ -0.36
SCAF1-202ENST00000595242 KCNU1A8MYU2 1149 aa12.81□□□□□ -0.36
SCAF1-202ENST00000595242 K7ERQ8 282 aa12.81□□□□□ -0.36
SCAF1-202ENST00000595242 RGS16O15492 202 aaPredicted RBP12.81□□□□□ -0.36
SCAF1-202ENST00000595242 LEFTY1O75610 366 aa12.81□□□□□ -0.36
SCAF1-202ENST00000595242 TMEM63AO94886 807 aa12.81□□□□□ -0.36
SCAF1-202ENST00000595242 ACSL3O95573 720 aa12.81□□□□□ -0.36
SCAF1-202ENST00000595242 ELAVL4P26378 380 aaKnown RBP12.81□□□□□ -0.36
SCAF1-202ENST00000595242 ATP5DP30049 168 aa12.81□□□□□ -0.36
SCAF1-202ENST00000595242 ADRA1BP35368 520 aa12.81□□□□□ -0.36
SCAF1-202ENST00000595242 MDH1P40925 334 aaKnown RBP12.81□□□□□ -0.36
SCAF1-202ENST00000595242 MMP13P45452 471 aa12.81□□□□□ -0.36
SCAF1-202ENST00000595242 CXCR3P49682 368 aa12.81□□□□□ -0.36
SCAF1-202ENST00000595242 IRAK1P51617 712 aa12.81□□□□□ -0.36
SCAF1-202ENST00000595242 ARL4CP56559 192 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms