RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 CRYL1Q9Y2S2 319 aa13.16□□□□□ -0.3
VRK3-209ENST00000594948 PTGDR2Q9Y5Y4 395 aa13.16□□□□□ -0.3
VRK3-209ENST00000594948 CHD5Q8TDI0 1954 aa13.16□□□□□ -0.3
VRK3-209ENST00000594948 M0QZQ0 153 aa13.16□□□□□ -0.3
VRK3-209ENST00000594948 ABCB7O75027 752 aa13.16□□□□□ -0.3
VRK3-209ENST00000594948 DEAF1O75398 565 aaPredicted RBP13.16□□□□□ -0.3
VRK3-209ENST00000594948 CRCPO75575 148 aa13.16□□□□□ -0.3
VRK3-209ENST00000594948 SLC22A3O75751 556 aa13.16□□□□□ -0.3
VRK3-209ENST00000594948 DNAJB5O75953 348 aa13.16□□□□□ -0.3
VRK3-209ENST00000594948 SNAP29O95721 258 aa13.16□□□□□ -0.3
VRK3-209ENST00000594948 MLYCDO95822 493 aa13.16□□□□□ -0.3
VRK3-209ENST00000594948 SLC4A1P02730 911 aa13.16□□□□□ -0.3
VRK3-209ENST00000594948 CHRM3P20309 590 aa13.16□□□□□ -0.3
VRK3-209ENST00000594948 UGT1A1P22309 533 aa13.16□□□□□ -0.3
VRK3-209ENST00000594948 UGT1A4P22310 534 aa13.16□□□□□ -0.3
VRK3-209ENST00000594948 HRH2P25021 359 aa13.16□□□□□ -0.3
VRK3-209ENST00000594948 EEF1DP29692 281 aaKnown RBP13.16□□□□□ -0.3
VRK3-209ENST00000594948 UGT1A3P35503 534 aa13.16□□□□□ -0.3
VRK3-209ENST00000594948 UGT1A5P35504 534 aa13.16□□□□□ -0.3
VRK3-209ENST00000594948 POLR2JP52435 117 aaKnown RBP13.16□□□□□ -0.3
VRK3-209ENST00000594948 STC1P52823 247 aa13.16□□□□□ -0.3
VRK3-209ENST00000594948 GABARAPL2P60520 117 aa13.16□□□□□ -0.3
VRK3-209ENST00000594948 IL10RBQ08334 325 aa13.16□□□□□ -0.3
VRK3-209ENST00000594948 ITKQ08881 620 aa13.16□□□□□ -0.3
VRK3-209ENST00000594948 SLC10A7Q0GE19 358 aa13.16□□□□□ -0.3
VRK3-209ENST00000594948 CBX3Q13185 183 aa13.16□□□□□ -0.3
VRK3-209ENST00000594948 DAG1Q14118 895 aa13.16□□□□□ -0.3
VRK3-209ENST00000594948 EML3Q32P44 896 aa13.16□□□□□ -0.3
VRK3-209ENST00000594948 LDLRAD1Q5T700 205 aa13.16□□□□□ -0.3
VRK3-209ENST00000594948 DCDC5Q6ZRR9 648 aa13.16□□□□□ -0.3
VRK3-209ENST00000594948 MRPL10Q7Z7H8 261 aaKnown RBP13.16□□□□□ -0.3
VRK3-209ENST00000594948 LDB1Q86U70 411 aaPredicted RBP13.16□□□□□ -0.3
VRK3-209ENST00000594948 HID1Q8IV36 788 aa13.16□□□□□ -0.3
VRK3-209ENST00000594948 KIAA2013Q8IYS2 634 aa13.16□□□□□ -0.3
VRK3-209ENST00000594948 OFCC1Q8IZS5 231 aa13.16□□□□□ -0.3
VRK3-209ENST00000594948 SCAMP5Q8TAC9 235 aa13.16□□□□□ -0.3
VRK3-209ENST00000594948 ITPKCQ96DU7 683 aa13.16□□□□□ -0.3
VRK3-209ENST00000594948 SLC39A13Q96H72 371 aa13.16□□□□□ -0.3
VRK3-209ENST00000594948 TBATAQ96M53 351 aa13.16□□□□□ -0.3
VRK3-209ENST00000594948 NSUN5Q96P11 429 aaKnown RBP13.16□□□□□ -0.3
VRK3-209ENST00000594948 KCNA7Q96RP8 456 aa13.16□□□□□ -0.3
VRK3-209ENST00000594948 AGO3Q9H9G7 860 aaKnown RBP13.16□□□□□ -0.3
VRK3-209ENST00000594948 CATSPERZQ9NTU4 200 aa13.16□□□□□ -0.3
VRK3-209ENST00000594948 TMLHEQ9NVH6 421 aa13.16□□□□□ -0.3
VRK3-209ENST00000594948 RIC8BQ9NVN3 520 aa13.16□□□□□ -0.3
VRK3-209ENST00000594948 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.16□□□□□ -0.3
VRK3-209ENST00000594948 MPP6Q9NZW5 540 aa13.16□□□□□ -0.3
VRK3-209ENST00000594948 UXTQ9UBK9 157 aaPredicted RBP13.16□□□□□ -0.3
VRK3-209ENST00000594948 SUN2Q9UH99 717 aa13.16□□□□□ -0.3
VRK3-209ENST00000594948 CLEC11AQ9Y240 323 aa13.16□□□□□ -0.3
VRK3-209ENST00000594948 CCDC162PA2VCL2 907 aa13.15□□□□□ -0.3
VRK3-209ENST00000594948 OR51F1A6NGY5 319 aa13.15□□□□□ -0.3
VRK3-209ENST00000594948 MOXD2PA6NHM9 499 aa13.15□□□□□ -0.3
VRK3-209ENST00000594948 LRRC14BA6NHZ5 514 aa13.15□□□□□ -0.3
VRK3-209ENST00000594948 MEIS3P2A8K0S8 358 aa13.15□□□□□ -0.3
VRK3-209ENST00000594948 H3BMM5 538 aa13.15□□□□□ -0.3
VRK3-209ENST00000594948 ARNTLO00327 626 aa13.15□□□□□ -0.3
VRK3-209ENST00000594948 PDHXO00330 501 aa13.15□□□□□ -0.3
VRK3-209ENST00000594948 PPP6CO00743 305 aa13.15□□□□□ -0.3
VRK3-209ENST00000594948 MSI1O43347 362 aaKnown RBP13.15□□□□□ -0.3
VRK3-209ENST00000594948 SNX2O60749 519 aa13.15□□□□□ -0.3
VRK3-209ENST00000594948 ARSFP54793 590 aa13.15□□□□□ -0.3
VRK3-209ENST00000594948 DIO3P55073 304 aa13.15□□□□□ -0.3
VRK3-209ENST00000594948 IHHQ14623 411 aa13.15□□□□□ -0.3
VRK3-209ENST00000594948 ANKDD1AQ495B1 522 aa13.15□□□□□ -0.3
VRK3-209ENST00000594948 RABL3Q5HYI8 236 aa13.15□□□□□ -0.3
VRK3-209ENST00000594948 PAGE3Q5JUK9 113 aa13.15□□□□□ -0.3
VRK3-209ENST00000594948 PIK3R6Q5UE93 754 aa13.15□□□□□ -0.3
VRK3-209ENST00000594948 NANOGP8Q6NSW7 305 aa13.15□□□□□ -0.3
VRK3-209ENST00000594948 TAF2Q6P1X5 1199 aa13.15□□□□□ -0.3
VRK3-209ENST00000594948 LINC00299Q6ZSB3 139 aa13.15□□□□□ -0.3
VRK3-209ENST00000594948 PLEKHH3Q7Z736 793 aa13.15□□□□□ -0.3
VRK3-209ENST00000594948 SPNS2Q8IVW8 549 aa13.15□□□□□ -0.3
VRK3-209ENST00000594948 THEM5Q8N1Q8 247 aa13.15□□□□□ -0.3
VRK3-209ENST00000594948 RYBPQ8N488 228 aaPredicted RBP13.15□□□□□ -0.3
VRK3-209ENST00000594948 DNAJB14Q8TBM8 379 aa13.15□□□□□ -0.3
VRK3-209ENST00000594948 BRSK1Q8TDC3 778 aa13.15□□□□□ -0.3
VRK3-209ENST00000594948 SH3RF2Q8TEC5 729 aa13.15□□□□□ -0.3
VRK3-209ENST00000594948 HDAC2Q92769 488 aaKnown RBP13.15□□□□□ -0.3
VRK3-209ENST00000594948 TANKQ92844 425 aa13.15□□□□□ -0.3
VRK3-209ENST00000594948 PABPC5Q96DU9 382 aaKnown RBP13.15□□□□□ -0.3
VRK3-209ENST00000594948 HMCESQ96FZ2 354 aa13.15□□□□□ -0.3
VRK3-209ENST00000594948 AURKBQ96GD4 344 aaPredicted RBP13.15□□□□□ -0.3
VRK3-209ENST00000594948 NSMCE2Q96MF7 247 aa13.15□□□□□ -0.3
VRK3-209ENST00000594948 CHID1Q9BWS9 393 aa13.15□□□□□ -0.3
VRK3-209ENST00000594948 NANOGQ9H9S0 305 aa13.15□□□□□ -0.3
VRK3-209ENST00000594948 RNF112Q9ULX5 631 aa13.15□□□□□ -0.3
VRK3-209ENST00000594948 BTRCQ9Y297 605 aa13.15□□□□□ -0.3
VRK3-209ENST00000594948 COQ6Q9Y2Z9 468 aa13.15□□□□□ -0.3
VRK3-209ENST00000594948 PCDHGA11Q9Y5H2 935 aa13.15□□□□□ -0.3
VRK3-209ENST00000594948 IGLV3-10A0A075B6K4 115 aa13.14□□□□□ -0.31
VRK3-209ENST00000594948 ARL5CA6NH57 179 aa13.14□□□□□ -0.31
VRK3-209ENST00000594948 C16orf96A6NNT2 1141 aa13.14□□□□□ -0.31
VRK3-209ENST00000594948 SUPT3HB4E1H0 165 aa13.14□□□□□ -0.31
VRK3-209ENST00000594948 H0Y858 1186 aa13.14□□□□□ -0.31
VRK3-209ENST00000594948 J3KR12 359 aa13.14□□□□□ -0.31
VRK3-209ENST00000594948 ATP6V1G1O75348 118 aa13.14□□□□□ -0.31
VRK3-209ENST00000594948 SUPT3HO75486 399 aa13.14□□□□□ -0.31
VRK3-209ENST00000594948 SOAT2O75908 522 aa13.14□□□□□ -0.31
VRK3-209ENST00000594948 ZBTB11O95625 1053 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms