RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 WDR26Q9H7D7 661 aa19.51■□□□□ 0.71
LSM4-203ENST00000593829 RAD18Q9NS91 495 aa19.51■□□□□ 0.71
LSM4-203ENST00000593829 DNAJC28Q9NX36 388 aa19.51■□□□□ 0.71
LSM4-203ENST00000593829 TMEM131Q92545 1883 aa19.51■□□□□ 0.71
LSM4-203ENST00000593829 TP53BP1Q12888 1972 aaPredicted RBP19.51■□□□□ 0.71
LSM4-203ENST00000593829 ERI2A8K979 691 aaKnown RBP19.51■□□□□ 0.71
LSM4-203ENST00000593829 CACNB4O00305 520 aaPredicted RBP19.51■□□□□ 0.71
LSM4-203ENST00000593829 TM4SF5O14894 197 aa19.51■□□□□ 0.71
LSM4-203ENST00000593829 PCDHGA12O60330 932 aa19.51■□□□□ 0.71
LSM4-203ENST00000593829 USP12O75317 370 aa19.51■□□□□ 0.71
LSM4-203ENST00000593829 AP2A1O95782 977 aa19.51■□□□□ 0.71
LSM4-203ENST00000593829 HOXC4P09017 264 aaPredicted RBP19.51■□□□□ 0.71
LSM4-203ENST00000593829 ZSCAN5DPP0CG00 497 aa19.51■□□□□ 0.71
LSM4-203ENST00000593829 CD59P13987 128 aa19.51■□□□□ 0.71
LSM4-203ENST00000593829 TEAD1P28347 426 aa19.51■□□□□ 0.71
LSM4-203ENST00000593829 RPL22P35268 128 aaKnown RBP19.51■□□□□ 0.71
LSM4-203ENST00000593829 ELF3P78545 371 aaPredicted RBP19.51■□□□□ 0.71
LSM4-203ENST00000593829 FUBP1Q96AE4 644 aaKnown RBP19.51■□□□□ 0.71
LSM4-203ENST00000593829 RIOK2Q9BVS4 552 aaKnown RBP19.51■□□□□ 0.71
LSM4-203ENST00000593829 CDH19Q9H159 772 aa19.51■□□□□ 0.71
LSM4-203ENST00000593829 FAM83DQ9H4H8 585 aa19.51■□□□□ 0.71
LSM4-203ENST00000593829 ARNT2Q9HBZ2 717 aa19.51■□□□□ 0.71
LSM4-203ENST00000593829 RAB6BQ9NRW1 208 aa19.51■□□□□ 0.71
LSM4-203ENST00000593829 AURKAO14965 403 aa19.5■□□□□ 0.71
LSM4-203ENST00000593829 PYGLP06737 847 aa19.5■□□□□ 0.71
LSM4-203ENST00000593829 HMGCLP35914 325 aa19.5■□□□□ 0.71
LSM4-203ENST00000593829 GPR1P46091 355 aa19.5■□□□□ 0.71
LSM4-203ENST00000593829 KIAA1024LP59773 190 aa19.5■□□□□ 0.71
LSM4-203ENST00000593829 TTC27Q6P3X3 843 aa19.5■□□□□ 0.71
LSM4-203ENST00000593829 GLT6D1Q7Z4J2 308 aa19.5■□□□□ 0.71
LSM4-203ENST00000593829 MDM1Q8TC05 714 aa19.5■□□□□ 0.71
LSM4-203ENST00000593829 NSRP1Q9H0G5 558 aaKnown RBP19.5■□□□□ 0.71
LSM4-203ENST00000593829 LRRC4CQ9HCJ2 640 aa19.5■□□□□ 0.71
LSM4-203ENST00000593829 PHPT1Q9NRX4 125 aaPredicted RBP19.5■□□□□ 0.71
LSM4-203ENST00000593829 GRHL1Q9NZI5 618 aa19.5■□□□□ 0.71
LSM4-203ENST00000593829 CEP250Q9BV73 2442 aa19.49■□□□□ 0.71
LSM4-203ENST00000593829 CSF2P04141 144 aa19.49■□□□□ 0.71
LSM4-203ENST00000593829 EPHA8P29322 1005 aaPredicted RBP19.49■□□□□ 0.71
LSM4-203ENST00000593829 COILP38432 576 aaPredicted RBP19.49■□□□□ 0.71
LSM4-203ENST00000593829 EIF2B5Q13144 721 aaKnown RBP19.49■□□□□ 0.71
LSM4-203ENST00000593829 SEMA5AQ13591 1074 aa19.49■□□□□ 0.71
LSM4-203ENST00000593829 PUM1Q14671 1186 aaKnown RBP eCLIP19.49■□□□□ 0.718e-8■□□□□ 9.6
LSM4-203ENST00000593829 ZNF542PQ5EBM4 170 aa19.49■□□□□ 0.71
LSM4-203ENST00000593829 DENND5AQ6IQ26 1287 aa19.49■□□□□ 0.71
LSM4-203ENST00000593829 CCDC137Q6PK04 289 aaKnown RBP19.49■□□□□ 0.71
LSM4-203ENST00000593829 LINC00523Q86TU6 105 aa19.49■□□□□ 0.71
LSM4-203ENST00000593829 HEATR4Q86WZ0 1026 aa19.49■□□□□ 0.71
LSM4-203ENST00000593829 TTC30BQ8N4P2 665 aa19.49■□□□□ 0.71
LSM4-203ENST00000593829 SAP25Q8TEE9 199 aa19.49■□□□□ 0.71
LSM4-203ENST00000593829 WDR92Q96MX6 357 aa19.49■□□□□ 0.71
LSM4-203ENST00000593829 TEX101Q9BY14 249 aa19.49■□□□□ 0.71
LSM4-203ENST00000593829 MTRF1LQ9UGC7 380 aaKnown RBP19.49■□□□□ 0.71
LSM4-203ENST00000593829 RGS16O15492 202 aaPredicted RBP19.49■□□□□ 0.71
LSM4-203ENST00000593829 SHBGP04278 402 aa19.49■□□□□ 0.71
LSM4-203ENST00000593829 NME1P15531 152 aaKnown RBP19.49■□□□□ 0.71
LSM4-203ENST00000593829 KELP23276 732 aa19.49■□□□□ 0.71
LSM4-203ENST00000593829 ID4P47928 161 aa19.49■□□□□ 0.71
LSM4-203ENST00000593829 BNIP3Q12983 259 aa19.49■□□□□ 0.71
LSM4-203ENST00000593829 SLMAPQ14BN4 828 aa19.49■□□□□ 0.71
LSM4-203ENST00000593829 HENMT1Q5T8I9 393 aaKnown RBP19.49■□□□□ 0.71
LSM4-203ENST00000593829 TLDC1Q6P9B6 456 aa19.49■□□□□ 0.71
LSM4-203ENST00000593829 ENPP7Q6UWV6 458 aa19.49■□□□□ 0.71
LSM4-203ENST00000593829 DBX2Q6ZNG2 339 aa19.49■□□□□ 0.71
LSM4-203ENST00000593829 ROPN1BQ9BZX4 212 aaPredicted RBP19.49■□□□□ 0.71
LSM4-203ENST00000593829 ROPN1Q9HAT0 212 aaPredicted RBP19.49■□□□□ 0.71
LSM4-203ENST00000593829 FLRT2O43155 660 aa19.48■□□□□ 0.71
LSM4-203ENST00000593829 ATP6V1G2O95670 118 aa19.48■□□□□ 0.71
LSM4-203ENST00000593829 SOD1P00441 154 aa19.48■□□□□ 0.71
LSM4-203ENST00000593829 MYCLP1P12525 358 aaPredicted RBP19.48■□□□□ 0.71
LSM4-203ENST00000593829 DCDC1P59894 354 aa19.48■□□□□ 0.71
LSM4-203ENST00000593829 HNRNPKP61978 463 aaKnown RBP eCLIP19.48■□□□□ 0.715e-6■□□□□ 11.2
LSM4-203ENST00000593829 CDK3Q00526 305 aa19.48■□□□□ 0.71
LSM4-203ENST00000593829 ADAMTSL4Q6UY14 1074 aa19.48■□□□□ 0.71
LSM4-203ENST00000593829 GATAD2AQ86YP4 633 aa19.48■□□□□ 0.71
LSM4-203ENST00000593829 GPR26Q8NDV2 337 aa19.48■□□□□ 0.71
LSM4-203ENST00000593829 SETD7Q8WTS6 366 aaKnown RBP19.48■□□□□ 0.71
LSM4-203ENST00000593829 AGAP2Q99490 1192 aa19.48■□□□□ 0.71
LSM4-203ENST00000593829 LGR4Q9BXB1 951 aa19.48■□□□□ 0.71
LSM4-203ENST00000593829 SAMD15Q9P1V8 674 aa19.48■□□□□ 0.71
LSM4-203ENST00000593829 NFKBIL1Q9UBC1 381 aaPredicted RBP19.48■□□□□ 0.71
LSM4-203ENST00000593829 H3BM21 787 aa19.47■□□□□ 0.71
LSM4-203ENST00000593829 JUNDP17535 347 aa19.47■□□□□ 0.71
LSM4-203ENST00000593829 PPARDQ03181 441 aa19.47■□□□□ 0.71
LSM4-203ENST00000593829 TAF1AQ15573 450 aaPredicted RBP19.47■□□□□ 0.71
LSM4-203ENST00000593829 PIP4P1Q86T03 277 aa19.47■□□□□ 0.71
LSM4-203ENST00000593829 NAXDQ8IW45 347 aa19.47■□□□□ 0.71
LSM4-203ENST00000593829 FBXO25Q8TCJ0 367 aa19.47■□□□□ 0.71
LSM4-203ENST00000593829 BRSK1Q8TDC3 778 aa19.47■□□□□ 0.71
LSM4-203ENST00000593829 GRK7Q8WTQ7 553 aa19.47■□□□□ 0.71
LSM4-203ENST00000593829 BTN2A2Q8WVV5 523 aa19.47■□□□□ 0.71
LSM4-203ENST00000593829 BPIFA1Q9NP55 256 aa19.47■□□□□ 0.71
LSM4-203ENST00000593829 INTS9Q9NV88 658 aaKnown RBP19.47■□□□□ 0.71
LSM4-203ENST00000593829 IL17CQ9P0M4 197 aa19.47■□□□□ 0.71
LSM4-203ENST00000593829 KLQ9UEF7 1012 aa19.47■□□□□ 0.71
LSM4-203ENST00000593829 KLF15Q9UIH9 416 aa19.47■□□□□ 0.71
LSM4-203ENST00000593829 PKP3Q9Y446 797 aa19.47■□□□□ 0.71
LSM4-203ENST00000593829 C2orf81A6NN90 581 aa19.47■□□□□ 0.71
LSM4-203ENST00000593829 SH3BP5O60239 455 aa19.47■□□□□ 0.71
LSM4-203ENST00000593829 SDC3O75056 442 aa19.47■□□□□ 0.71
LSM4-203ENST00000593829 PIAS2O75928 621 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms