RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 PADI1Q9ULC6 663 aa12.62□□□□□ -0.39
PRKCSH-210ENST00000589990 PHTF1Q9UMS5 762 aa12.62□□□□□ -0.39
PRKCSH-210ENST00000589990 AP4E1Q9UPM8 1137 aa12.62□□□□□ -0.39
PRKCSH-210ENST00000589990 PCDHGA9Q9Y5G4 932 aaKnown RBP12.62□□□□□ -0.39
PRKCSH-210ENST00000589990 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.61□□□□□ -0.39
PRKCSH-210ENST00000589990 PSMD11O00231 422 aa12.61□□□□□ -0.39
PRKCSH-210ENST00000589990 SOCS5O75159 536 aa12.61□□□□□ -0.39
PRKCSH-210ENST00000589990 PGLSO95336 258 aa12.61□□□□□ -0.39
PRKCSH-210ENST00000589990 FGF5P12034 268 aa12.61□□□□□ -0.39
PRKCSH-210ENST00000589990 F3P13726 295 aa12.61□□□□□ -0.39
PRKCSH-210ENST00000589990 PTGIRP43119 386 aa12.61□□□□□ -0.39
PRKCSH-210ENST00000589990 GSCP56915 257 aaPredicted RBP12.61□□□□□ -0.39
PRKCSH-210ENST00000589990 RFTN1Q14699 578 aaPredicted RBP12.61□□□□□ -0.39
PRKCSH-210ENST00000589990 KCNAB1Q14722 419 aa12.61□□□□□ -0.39
PRKCSH-210ENST00000589990 UGT8Q16880 541 aa12.61□□□□□ -0.39
PRKCSH-210ENST00000589990 PPP1R15BQ5SWA1 713 aa12.61□□□□□ -0.39
PRKCSH-210ENST00000589990 ZNF648Q5T619 568 aaPredicted RBP12.61□□□□□ -0.39
PRKCSH-210ENST00000589990 TMCO4Q5TGY1 634 aa12.61□□□□□ -0.39
PRKCSH-210ENST00000589990 PWWP2BQ6NUJ5 590 aa12.61□□□□□ -0.39
PRKCSH-210ENST00000589990 CERS6Q6ZMG9 384 aa12.61□□□□□ -0.39
PRKCSH-210ENST00000589990 RFX8Q6ZV50 586 aa12.61□□□□□ -0.39
PRKCSH-210ENST00000589990 MON1BQ7L1V2 547 aa12.61□□□□□ -0.39
PRKCSH-210ENST00000589990 SLC9B2Q86UD5 537 aa12.61□□□□□ -0.39
PRKCSH-210ENST00000589990 NUDCD1Q96RS6 583 aa12.61□□□□□ -0.39
PRKCSH-210ENST00000589990 WDR24Q96S15 920 aa12.61□□□□□ -0.39
PRKCSH-210ENST00000589990 TUBGCP2Q9BSJ2 902 aa12.61□□□□□ -0.39
PRKCSH-210ENST00000589990 NUDT9Q9BW91 350 aa12.61□□□□□ -0.39
PRKCSH-210ENST00000589990 ARFGAP3Q9NP61 516 aa12.61□□□□□ -0.39
PRKCSH-210ENST00000589990 TACC2O95359 2948 aa12.61□□□□□ -0.39
PRKCSH-210ENST00000589990 LILRA5A6NI73 299 aa12.6□□□□□ -0.39
PRKCSH-210ENST00000589990 FADS2P1A8MWK0 482 aa12.6□□□□□ -0.39
PRKCSH-210ENST00000589990 RASSF9O75901 435 aa12.6□□□□□ -0.39
PRKCSH-210ENST00000589990 UBXN7O94888 489 aa12.6□□□□□ -0.39
PRKCSH-210ENST00000589990 CBX6O95503 412 aa12.6□□□□□ -0.39
PRKCSH-210ENST00000589990 MBD3O95983 291 aa12.6□□□□□ -0.39
PRKCSH-210ENST00000589990 CCNYL3P0C7X3 344 aa12.6□□□□□ -0.39
PRKCSH-210ENST00000589990 NFKBIAP25963 317 aa12.6□□□□□ -0.39
PRKCSH-210ENST00000589990 HNRNPH3P31942 346 aaKnown RBP12.6□□□□□ -0.39
PRKCSH-210ENST00000589990 NSFP46459 744 aaKnown RBP12.6□□□□□ -0.39
PRKCSH-210ENST00000589990 ZNF235Q14590 738 aa12.6□□□□□ -0.39
PRKCSH-210ENST00000589990 IL11RAQ14626 422 aa12.6□□□□□ -0.39
PRKCSH-210ENST00000589990 CLEC16AQ2KHT3 1053 aa12.6□□□□□ -0.39
PRKCSH-210ENST00000589990 FAM92BQ6ZTR7 304 aa12.6□□□□□ -0.39
PRKCSH-210ENST00000589990 CYP4V2Q6ZWL3 525 aaPredicted RBP12.6□□□□□ -0.39
PRKCSH-210ENST00000589990 ZNF677Q86XU0 584 aa12.6□□□□□ -0.39
PRKCSH-210ENST00000589990 PHF13Q86YI8 300 aaPredicted RBP12.6□□□□□ -0.39
PRKCSH-210ENST00000589990 FDCSPQ8NFU4 85 aa12.6□□□□□ -0.39
PRKCSH-210ENST00000589990 SH3KBP1Q96B97 665 aa12.6□□□□□ -0.39
PRKCSH-210ENST00000589990 SNRNP40Q96DI7 357 aaKnown RBP12.6□□□□□ -0.39
PRKCSH-210ENST00000589990 HERPUD2Q9BSE4 406 aa12.6□□□□□ -0.39
PRKCSH-210ENST00000589990 CNPY3Q9BT09 278 aa12.6□□□□□ -0.39
PRKCSH-210ENST00000589990 SNRNP25Q9BV90 132 aaKnown RBP12.6□□□□□ -0.39
PRKCSH-210ENST00000589990 NUP62CLQ9H1M0 184 aa12.6□□□□□ -0.39
PRKCSH-210ENST00000589990 CLSTN2Q9H4D0 955 aa12.6□□□□□ -0.39
PRKCSH-210ENST00000589990 SLAMF7Q9NQ25 335 aa12.6□□□□□ -0.39
PRKCSH-210ENST00000589990 ACSS2Q9NR19 701 aa12.6□□□□□ -0.39
PRKCSH-210ENST00000589990 ETNK2Q9NVF9 386 aa12.6□□□□□ -0.39
PRKCSH-210ENST00000589990 ASF1BQ9NVP2 202 aa12.6□□□□□ -0.39
PRKCSH-210ENST00000589990 KCTD5Q9NXV2 234 aa12.6□□□□□ -0.39
PRKCSH-210ENST00000589990 ZNF624Q9P2J8 865 aaPredicted RBP12.6□□□□□ -0.39
PRKCSH-210ENST00000589990 PCSK1NQ9UHG2 260 aa12.6□□□□□ -0.39
PRKCSH-210ENST00000589990 DIDO1Q9BTC0 2240 aaKnown RBP12.6□□□□□ -0.39
PRKCSH-210ENST00000589990 ARHGAP10A1A4S6 786 aa12.59□□□□□ -0.39
PRKCSH-210ENST00000589990 A6NL46 340 aa12.59□□□□□ -0.39
PRKCSH-210ENST00000589990 C21orf140B9A014 251 aa12.59□□□□□ -0.39
PRKCSH-210ENST00000589990 PES1O00541 588 aaKnown RBP12.59□□□□□ -0.39
PRKCSH-210ENST00000589990 RECKO95980 971 aa12.59□□□□□ -0.39
PRKCSH-210ENST00000589990 FOLR1P15328 257 aa12.59□□□□□ -0.39
PRKCSH-210ENST00000589990 PTPN4P29074 926 aa12.59□□□□□ -0.39
PRKCSH-210ENST00000589990 SLC19A1P41440 591 aa12.59□□□□□ -0.39
PRKCSH-210ENST00000589990 RENBPP51606 427 aa12.59□□□□□ -0.39
PRKCSH-210ENST00000589990 AIF1P55008 147 aa12.59□□□□□ -0.39
PRKCSH-210ENST00000589990 JAM2P57087 298 aa12.59□□□□□ -0.39
PRKCSH-210ENST00000589990 RAPSNQ13702 412 aa12.59□□□□□ -0.39
PRKCSH-210ENST00000589990 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.59□□□□□ -0.39
PRKCSH-210ENST00000589990 PPP6R3Q5H9R7 873 aaPredicted RBP12.59□□□□□ -0.39
PRKCSH-210ENST00000589990 DNAJC24Q6P3W2 148 aa12.59□□□□□ -0.39
PRKCSH-210ENST00000589990 TMEM26Q6ZUK4 368 aa12.59□□□□□ -0.39
PRKCSH-210ENST00000589990 USP45Q70EL2 814 aa12.59□□□□□ -0.39
PRKCSH-210ENST00000589990 LZTR1Q8N653 840 aa12.59□□□□□ -0.39
PRKCSH-210ENST00000589990 EXD1Q8NHP7 514 aa12.59□□□□□ -0.39
PRKCSH-210ENST00000589990 MGME1Q9BQP7 344 aa12.59□□□□□ -0.39
PRKCSH-210ENST00000589990 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.59□□□□□ -0.39
PRKCSH-210ENST00000589990 STN1Q9H668 368 aaKnown RBP12.59□□□□□ -0.39
PRKCSH-210ENST00000589990 NLRC4Q9NPP4 1024 aa12.59□□□□□ -0.39
PRKCSH-210ENST00000589990 DTLQ9NZJ0 730 aa12.59□□□□□ -0.39
PRKCSH-210ENST00000589990 SLC23A2Q9UGH3 650 aa12.59□□□□□ -0.39
PRKCSH-210ENST00000589990 SLC5A6Q9Y289 635 aa12.59□□□□□ -0.39
PRKCSH-210ENST00000589990 SIK3Q9Y2K2 1263 aa12.59□□□□□ -0.39
PRKCSH-210ENST00000589990 PPIL1Q9Y3C6 166 aa12.59□□□□□ -0.39
PRKCSH-210ENST00000589990 POLEQ07864 2286 aa12.58□□□□□ -0.4
PRKCSH-210ENST00000589990 IGHV5-51A0A0C4DH38 117 aa12.58□□□□□ -0.4
PRKCSH-210ENST00000589990 KIR2DS5A0A0G2JLQ3 304 aa12.58□□□□□ -0.4
PRKCSH-210ENST00000589990 A0A0G2JNG1 304 aa12.58□□□□□ -0.4
PRKCSH-210ENST00000589990 KIR2DS3K7RE56 304 aa12.58□□□□□ -0.4
PRKCSH-210ENST00000589990 ZNF185O15231 689 aa12.58□□□□□ -0.4
PRKCSH-210ENST00000589990 DAPK3O43293 454 aa12.58□□□□□ -0.4
PRKCSH-210ENST00000589990 FZD6O60353 706 aa12.58□□□□□ -0.4
PRKCSH-210ENST00000589990 CEACAM4O75871 244 aa12.58□□□□□ -0.4
PRKCSH-210ENST00000589990 CLDN7O95471 211 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms