RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 OR56A4Q8NGH8 313 aa19.02■□□□□ 0.64
PRKCSH-209ENST00000589838 ZNF483Q8TF39 744 aaPredicted RBP19.02■□□□□ 0.64
PRKCSH-209ENST00000589838 CCT7Q99832 543 aa19.02■□□□□ 0.64
PRKCSH-209ENST00000589838 HOPXQ9BPY8 73 aaPredicted RBP19.02■□□□□ 0.64
PRKCSH-209ENST00000589838 C2orf49Q9BVC5 232 aaPredicted RBP19.02■□□□□ 0.64
PRKCSH-209ENST00000589838 FBRSL1Q9HCM7 1045 aaKnown RBP19.02■□□□□ 0.64
PRKCSH-209ENST00000589838 SPG21Q9NZD8 308 aa19.02■□□□□ 0.64
PRKCSH-209ENST00000589838 TMEM181Q9P2C4 612 aa19.02■□□□□ 0.64
PRKCSH-209ENST00000589838 VPS51Q9UID3 782 aa19.02■□□□□ 0.64
PRKCSH-209ENST00000589838 LSM7Q9UK45 103 aaKnown RBP19.02■□□□□ 0.64
PRKCSH-209ENST00000589838 TRIM17Q9Y577 477 aa19.02■□□□□ 0.64
PRKCSH-209ENST00000589838 PCDHB9Q9Y5E1 797 aa19.02■□□□□ 0.64
PRKCSH-209ENST00000589838 OR51B4Q9Y5P0 310 aa19.02■□□□□ 0.64
PRKCSH-209ENST00000589838 INSL5Q9Y5Q6 135 aa19.02■□□□□ 0.64
PRKCSH-209ENST00000589838 BPTFQ12830 3046 aa19.02■□□□□ 0.64
PRKCSH-209ENST00000589838 A0A0J9YYE9 177 aa19.01■□□□□ 0.63
PRKCSH-209ENST00000589838 NIPSNAP2O75323 286 aa19.01■□□□□ 0.63
PRKCSH-209ENST00000589838 UROSP10746 265 aa19.01■□□□□ 0.63
PRKCSH-209ENST00000589838 TCN1P20061 433 aaPredicted RBP19.01■□□□□ 0.63
PRKCSH-209ENST00000589838 HMGCLP35914 325 aa19.01■□□□□ 0.63
PRKCSH-209ENST00000589838 MAPK8P45983 427 aa19.01■□□□□ 0.63
PRKCSH-209ENST00000589838 GRIK2Q13002 908 aa19.01■□□□□ 0.63
PRKCSH-209ENST00000589838 C8orf82Q6P1X6 216 aaPredicted RBP19.01■□□□□ 0.63
PRKCSH-209ENST00000589838 SIDT2Q8NBJ9 832 aaKnown RBP19.01■□□□□ 0.63
PRKCSH-209ENST00000589838 CD200R1Q8TD46 325 aa19.01■□□□□ 0.63
PRKCSH-209ENST00000589838 TSPEARQ8WU66 669 aa19.01■□□□□ 0.63
PRKCSH-209ENST00000589838 LINGO1Q96FE5 620 aa19.01■□□□□ 0.63
PRKCSH-209ENST00000589838 SMIM14Q96QK8 99 aa19.01■□□□□ 0.63
PRKCSH-209ENST00000589838 SEMA4BQ9NPR2 832 aaPredicted RBP19.01■□□□□ 0.63
PRKCSH-209ENST00000589838 DNMT3BQ9UBC3 853 aaKnown RBP19.01■□□□□ 0.63
PRKCSH-209ENST00000589838 RIMS3Q9UJD0 308 aa19.01■□□□□ 0.63
PRKCSH-209ENST00000589838 ZNF510Q9Y2H8 683 aa19.01■□□□□ 0.63
PRKCSH-209ENST00000589838 GFRA2O00451 464 aa19.01■□□□□ 0.63
PRKCSH-209ENST00000589838 PPP6CO00743 305 aa19.01■□□□□ 0.63
PRKCSH-209ENST00000589838 OR1I1O60431 355 aa19.01■□□□□ 0.63
PRKCSH-209ENST00000589838 C8BP07358 591 aa19.01■□□□□ 0.63
PRKCSH-209ENST00000589838 ARSAP15289 507 aa19.01■□□□□ 0.63
PRKCSH-209ENST00000589838 LAG3P18627 525 aa19.01■□□□□ 0.63
PRKCSH-209ENST00000589838 HDCP19113 662 aa19.01■□□□□ 0.63
PRKCSH-209ENST00000589838 CSKP41240 450 aa19.01■□□□□ 0.63
PRKCSH-209ENST00000589838 OGFOD2Q6N063 350 aa19.01■□□□□ 0.63
PRKCSH-209ENST00000589838 Q6ZNB5 142 aa19.01■□□□□ 0.63
PRKCSH-209ENST00000589838 TMEM150AQ86TG1 271 aa19.01■□□□□ 0.63
PRKCSH-209ENST00000589838 DDX53Q86TM3 631 aaKnown RBP19.01■□□□□ 0.63
PRKCSH-209ENST00000589838 METTL3Q86U44 580 aaKnown RBP19.01■□□□□ 0.63
PRKCSH-209ENST00000589838 PHYKPLQ8IUZ5 450 aa19.01■□□□□ 0.63
PRKCSH-209ENST00000589838 FUNDC1Q8IVP5 155 aa19.01■□□□□ 0.63
PRKCSH-209ENST00000589838 EEF1AKMT1Q8WVE0 214 aa19.01■□□□□ 0.63
PRKCSH-209ENST00000589838 DCUN1D1Q96GG9 259 aa19.01■□□□□ 0.63
PRKCSH-209ENST00000589838 MYO19Q96H55 970 aa19.01■□□□□ 0.63
PRKCSH-209ENST00000589838 PDLIM5Q96HC4 596 aaKnown RBP19.01■□□□□ 0.63
PRKCSH-209ENST00000589838 HGH1Q9BTY7 390 aa19.01■□□□□ 0.63
PRKCSH-209ENST00000589838 COPS7BQ9H9Q2 264 aaPredicted RBP19.01■□□□□ 0.63
PRKCSH-209ENST00000589838 GID8Q9NWU2 228 aa19.01■□□□□ 0.63
PRKCSH-209ENST00000589838 CD274Q9NZQ7 290 aa19.01■□□□□ 0.63
PRKCSH-209ENST00000589838 CD300AQ9UGN4 299 aa19.01■□□□□ 0.63
PRKCSH-209ENST00000589838 IKZF3Q9UKT9 509 aa19.01■□□□□ 0.63
PRKCSH-209ENST00000589838 ASB3Q9Y575 518 aa19.01■□□□□ 0.63
PRKCSH-209ENST00000589838 PRMT5O14744 637 aaPredicted RBP19■□□□□ 0.63
PRKCSH-209ENST00000589838 ANGPT2O15123 496 aa19■□□□□ 0.63
PRKCSH-209ENST00000589838 PGLSO95336 258 aa19■□□□□ 0.63
PRKCSH-209ENST00000589838 ESRRBO95718 433 aa19■□□□□ 0.63
PRKCSH-209ENST00000589838 TSPAN12O95859 305 aa19■□□□□ 0.63
PRKCSH-209ENST00000589838 OLFM2O95897 454 aa19■□□□□ 0.63
PRKCSH-209ENST00000589838 LINC00032P0C843 101 aa19■□□□□ 0.63
PRKCSH-209ENST00000589838 PIM1P11309 404 aaPredicted RBP19■□□□□ 0.63
PRKCSH-209ENST00000589838 HSPA13P48723 471 aa19■□□□□ 0.63
PRKCSH-209ENST00000589838 CSNK1DP48730 415 aa19■□□□□ 0.63
PRKCSH-209ENST00000589838 MRPL19P49406 292 aaKnown RBP19■□□□□ 0.63
PRKCSH-209ENST00000589838 FOXA1P55317 472 aa19■□□□□ 0.63
PRKCSH-209ENST00000589838 COQ5Q5HYK3 327 aa19■□□□□ 0.63
PRKCSH-209ENST00000589838 FAM217AQ8IXS0 508 aa19■□□□□ 0.63
PRKCSH-209ENST00000589838 ARL14EPQ8N8R7 260 aaPredicted RBP19■□□□□ 0.63
PRKCSH-209ENST00000589838 ACDQ96AP0 544 aa19■□□□□ 0.63
PRKCSH-209ENST00000589838 ALG14Q96F25 216 aa19■□□□□ 0.63
PRKCSH-209ENST00000589838 EFHD1Q9BUP0 239 aa19■□□□□ 0.63
PRKCSH-209ENST00000589838 P2RY12Q9H244 342 aa19■□□□□ 0.63
PRKCSH-209ENST00000589838 SDR39U1Q9NRG7 319 aaPredicted RBP19■□□□□ 0.63
PRKCSH-209ENST00000589838 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19■□□□□ 0.634e-7■■□□□ 11.8
PRKCSH-209ENST00000589838 MRPL17Q9NRX2 175 aaKnown RBP19■□□□□ 0.63
PRKCSH-209ENST00000589838 NUDT4Q9NZJ9 180 aa19■□□□□ 0.63
PRKCSH-209ENST00000589838 GALPQ9UBC7 116 aa19■□□□□ 0.63
PRKCSH-209ENST00000589838 POLG2Q9UHN1 485 aa19■□□□□ 0.63
PRKCSH-209ENST00000589838 PCTPQ9UKL6 214 aa19■□□□□ 0.63
PRKCSH-209ENST00000589838 RAB26Q9ULW5 256 aa19■□□□□ 0.63
PRKCSH-209ENST00000589838 FCF1Q9Y324 198 aaKnown RBP19■□□□□ 0.63
PRKCSH-209ENST00000589838 DHRS7Q9Y394 339 aa19■□□□□ 0.63
PRKCSH-209ENST00000589838 NR5A2O00482 541 aa18.99■□□□□ 0.63
PRKCSH-209ENST00000589838 HGFP14210 728 aa18.99■□□□□ 0.63
PRKCSH-209ENST00000589838 ZNF7P17097 686 aaPredicted RBP18.99■□□□□ 0.63
PRKCSH-209ENST00000589838 RFC2P35250 354 aa18.99■□□□□ 0.63
PRKCSH-209ENST00000589838 RHDQ02161 417 aa18.99■□□□□ 0.63
PRKCSH-209ENST00000589838 CREMQ03060 361 aa18.99■□□□□ 0.63
PRKCSH-209ENST00000589838 FOLH1Q04609 750 aa18.99■□□□□ 0.63
PRKCSH-209ENST00000589838 TLE2Q04725 743 aa18.99■□□□□ 0.63
PRKCSH-209ENST00000589838 GRB7Q14451 532 aa18.99■□□□□ 0.63
PRKCSH-209ENST00000589838 RBBP7Q16576 425 aa18.99■□□□□ 0.63
PRKCSH-209ENST00000589838 SPATS1Q496A3 300 aa18.99■□□□□ 0.63
PRKCSH-209ENST00000589838 LYPLAL1Q5VWZ2 237 aa18.99■□□□□ 0.63
PRKCSH-209ENST00000589838 ST13P4Q8IZP2 240 aaPredicted RBP18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms