RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 CNOT6Q9ULM6 557 aaKnown RBP13.51□□□□□ -0.25
VMP1-210ENST00000589823 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.51□□□□□ -0.25
VMP1-210ENST00000589823 SPAG17Q6Q759 2223 aa13.51□□□□□ -0.25
VMP1-210ENST00000589823 TRBV5-4A0A0C4DH59 114 aa13.5□□□□□ -0.25
VMP1-210ENST00000589823 A0A1B0GVT2 93 aa13.5□□□□□ -0.25
VMP1-210ENST00000589823 AGAP14A8MT82 685 aa13.5□□□□□ -0.25
VMP1-210ENST00000589823 GOLGA8KD6RF30 607 aa13.5□□□□□ -0.25
VMP1-210ENST00000589823 GOLGA8TH3BQL2 631 aa13.5□□□□□ -0.25
VMP1-210ENST00000589823 PFDN6O15212 129 aa13.5□□□□□ -0.25
VMP1-210ENST00000589823 CD3EAPO15446 510 aaKnown RBP13.5□□□□□ -0.25
VMP1-210ENST00000589823 GPR39O43194 453 aa13.5□□□□□ -0.25
VMP1-210ENST00000589823 SPAG6O75602 509 aa13.5□□□□□ -0.25
VMP1-210ENST00000589823 RALBP11234 206 aa13.5□□□□□ -0.25
VMP1-210ENST00000589823 ARNTP27540 789 aa13.5□□□□□ -0.25
VMP1-210ENST00000589823 PMLP29590 882 aa13.5□□□□□ -0.25
VMP1-210ENST00000589823 AKT1P31749 480 aa13.5□□□□□ -0.25
VMP1-210ENST00000589823 ARCN1P48444 511 aaKnown RBP13.5□□□□□ -0.25
VMP1-210ENST00000589823 FRG1Q14331 258 aaKnown RBP13.5□□□□□ -0.25
VMP1-210ENST00000589823 SMAD1Q15797 465 aaKnown RBP13.5□□□□□ -0.25
VMP1-210ENST00000589823 GPRC6AQ5T6X5 926 aa13.5□□□□□ -0.25
VMP1-210ENST00000589823 PSAPL1Q6NUJ1 521 aa13.5□□□□□ -0.25
VMP1-210ENST00000589823 NEPROQ6NW34 567 aa13.5□□□□□ -0.25
VMP1-210ENST00000589823 DOK6Q6PKX4 331 aa13.5□□□□□ -0.25
VMP1-210ENST00000589823 MACC1Q6ZN28 852 aa13.5□□□□□ -0.25
VMP1-210ENST00000589823 C3orf62Q6ZUJ4 267 aa13.5□□□□□ -0.25
VMP1-210ENST00000589823 TRIM74Q86UV6 250 aa13.5□□□□□ -0.25
VMP1-210ENST00000589823 SERPINA9Q86WD7 417 aa13.5□□□□□ -0.25
VMP1-210ENST00000589823 RELL1Q8IUW5 271 aa13.5□□□□□ -0.25
VMP1-210ENST00000589823 LMNTD2Q8IXW0 634 aa13.5□□□□□ -0.25
VMP1-210ENST00000589823 NXPE1Q8N323 547 aa13.5□□□□□ -0.25
VMP1-210ENST00000589823 DDHD1Q8NEL9 900 aa13.5□□□□□ -0.25
VMP1-210ENST00000589823 HEXDCQ8WVB3 486 aa13.5□□□□□ -0.25
VMP1-210ENST00000589823 CERS2Q96G23 380 aa13.5□□□□□ -0.25
VMP1-210ENST00000589823 DCUN1D1Q96GG9 259 aa13.5□□□□□ -0.25
VMP1-210ENST00000589823 COX14Q96I36 57 aa13.5□□□□□ -0.25
VMP1-210ENST00000589823 WDR92Q96MX6 357 aa13.5□□□□□ -0.25
VMP1-210ENST00000589823 COPS8Q99627 209 aa13.5□□□□□ -0.25
VMP1-210ENST00000589823 FAM167BQ9BTA0 163 aa13.5□□□□□ -0.25
VMP1-210ENST00000589823 LGR4Q9BXB1 951 aa13.5□□□□□ -0.25
VMP1-210ENST00000589823 NUSAP1Q9BXS6 441 aaKnown RBP13.5□□□□□ -0.25
VMP1-210ENST00000589823 PARD6BQ9BYG5 372 aa13.5□□□□□ -0.25
VMP1-210ENST00000589823 VPS37BQ9H9H4 285 aa13.5□□□□□ -0.25
VMP1-210ENST00000589823 TRIM39Q9HCM9 518 aa13.5□□□□□ -0.25
VMP1-210ENST00000589823 ARFGAP3Q9NP61 516 aa13.5□□□□□ -0.25
VMP1-210ENST00000589823 ZDHHC3Q9NYG2 299 aa13.5□□□□□ -0.25
VMP1-210ENST00000589823 IL1RAPL1Q9NZN1 696 aa13.5□□□□□ -0.25
VMP1-210ENST00000589823 NCDNQ9UBB6 729 aa13.5□□□□□ -0.25
VMP1-210ENST00000589823 SLC6A14Q9UN76 642 aa13.5□□□□□ -0.25
VMP1-210ENST00000589823 ANKRD6Q9Y2G4 727 aa13.5□□□□□ -0.25
VMP1-210ENST00000589823 DOCK9Q9BZ29 2069 aa13.5□□□□□ -0.25
VMP1-210ENST00000589823 TNRC6BQ9UPQ9 1833 aaKnown RBP13.5□□□□□ -0.25
VMP1-210ENST00000589823 CACNA1HO95180 2353 aa13.5□□□□□ -0.25
VMP1-210ENST00000589823 ZNF106Q9H2Y7 1883 aaKnown RBP13.49□□□□□ -0.25
VMP1-210ENST00000589823 SPTY2D1-AS1A0A0U1RR47 76 aa13.49□□□□□ -0.25
VMP1-210ENST00000589823 CFAP99D6REC4 459 aa13.49□□□□□ -0.25
VMP1-210ENST00000589823 VEGFDO43915 354 aa13.49□□□□□ -0.25
VMP1-210ENST00000589823 FAM153BP0C7A2 387 aa13.49□□□□□ -0.25
VMP1-210ENST00000589823 PRSS56P0CW18 603 aa13.49□□□□□ -0.25
VMP1-210ENST00000589823 MYBL2P10244 700 aa13.49□□□□□ -0.25
VMP1-210ENST00000589823 MSH3P20585 1137 aa13.49□□□□□ -0.25
VMP1-210ENST00000589823 ACRV1P26436 265 aa13.49□□□□□ -0.25
VMP1-210ENST00000589823 SSTR1P30872 391 aa13.49□□□□□ -0.25
VMP1-210ENST00000589823 PHBP35232 272 aa13.49□□□□□ -0.25
VMP1-210ENST00000589823 TTPAP49638 278 aa13.49□□□□□ -0.25
VMP1-210ENST00000589823 CDKN1CP49918 316 aaPredicted RBP13.49□□□□□ -0.25
VMP1-210ENST00000589823 NXPH1P58417 271 aa13.49□□□□□ -0.25
VMP1-210ENST00000589823 GTF2H3Q13889 308 aa13.49□□□□□ -0.25
VMP1-210ENST00000589823 ITIH4Q14624 930 aa13.49□□□□□ -0.25
VMP1-210ENST00000589823 KYNUQ16719 465 aa13.49□□□□□ -0.25
VMP1-210ENST00000589823 FAM153CQ494X1 144 aa13.49□□□□□ -0.25
VMP1-210ENST00000589823 HSP90AA5PQ58FG0 334 aa13.49□□□□□ -0.25
VMP1-210ENST00000589823 TRIM61Q5EBN2 209 aa13.49□□□□□ -0.25
VMP1-210ENST00000589823 SLC23A3Q6PIS1 610 aa13.49□□□□□ -0.25
VMP1-210ENST00000589823 MICALCLQ6ZW33 695 aa13.49□□□□□ -0.25
VMP1-210ENST00000589823 PIANPQ8IYJ0 282 aa13.49□□□□□ -0.25
VMP1-210ENST00000589823 SLC22A18ASQ8N1D0 253 aa13.49□□□□□ -0.25
VMP1-210ENST00000589823 OR56A4Q8NGH8 313 aa13.49□□□□□ -0.25
VMP1-210ENST00000589823 GPR150Q8NGU9 434 aa13.49□□□□□ -0.25
VMP1-210ENST00000589823 CDC42EP4Q9H3Q1 356 aaKnown RBP13.49□□□□□ -0.25
VMP1-210ENST00000589823 PLAC1Q9HBJ0 212 aa13.49□□□□□ -0.25
VMP1-210ENST00000589823 LRRC4CQ9HCJ2 640 aa13.49□□□□□ -0.25
VMP1-210ENST00000589823 GPR27Q9NS67 375 aa13.49□□□□□ -0.25
VMP1-210ENST00000589823 IARS2Q9NSE4 1012 aaKnown RBP13.49□□□□□ -0.25
VMP1-210ENST00000589823 NINJ2Q9NZG7 142 aa13.49□□□□□ -0.25
VMP1-210ENST00000589823 VPS18Q9P253 973 aa13.49□□□□□ -0.25
VMP1-210ENST00000589823 KLQ9UEF7 1012 aa13.49□□□□□ -0.25
VMP1-210ENST00000589823 MOSPD1Q9UJG1 213 aa13.49□□□□□ -0.25
VMP1-210ENST00000589823 TMPRSS11EQ9UL52 423 aa13.49□□□□□ -0.25
VMP1-210ENST00000589823 TMEM98Q9Y2Y6 226 aa13.49□□□□□ -0.25
VMP1-210ENST00000589823 OAS3Q9Y6K5 1087 aaKnown RBP13.49□□□□□ -0.25
VMP1-210ENST00000589823 USP34Q70CQ2 3546 aa13.48□□□□□ -0.25
VMP1-210ENST00000589823 TMEM202A6NGA9 273 aa13.48□□□□□ -0.25
VMP1-210ENST00000589823 TNFRSF10CO14798 259 aa13.48□□□□□ -0.25
VMP1-210ENST00000589823 KHNYNO15037 678 aaKnown RBP13.48□□□□□ -0.25
VMP1-210ENST00000589823 MTX2O75431 263 aa13.48□□□□□ -0.25
VMP1-210ENST00000589823 NDUFS3O75489 264 aa13.48□□□□□ -0.25
VMP1-210ENST00000589823 CDK14O94921 469 aa13.48□□□□□ -0.25
VMP1-210ENST00000589823 SYPP08247 313 aa13.48□□□□□ -0.25
VMP1-210ENST00000589823 ERVK-10P10266 1014 aa13.48□□□□□ -0.25
VMP1-210ENST00000589823 OGNP20774 298 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms