RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 ERVK-21P61565 698 aa10.31□□□□□ -0.76
VPS25-203ENST00000589520 NFATC2Q13469 925 aa10.31□□□□□ -0.76
VPS25-203ENST00000589520 CYLC2Q14093 348 aaPredicted RBP10.31□□□□□ -0.76
VPS25-203ENST00000589520 TRMT5Q32P41 509 aaKnown RBP10.31□□□□□ -0.76
VPS25-203ENST00000589520 FUT11Q495W5 492 aa10.31□□□□□ -0.76
VPS25-203ENST00000589520 ACCSLQ4AC99 568 aa10.31□□□□□ -0.76
VPS25-203ENST00000589520 CDKL4Q5MAI5 379 aa10.31□□□□□ -0.76
VPS25-203ENST00000589520 CTSL3PQ5NE16 218 aa10.31□□□□□ -0.76
VPS25-203ENST00000589520 VWA5B1Q5TIE3 1220 aa10.31□□□□□ -0.76
VPS25-203ENST00000589520 PTRHD1Q6GMV3 140 aaKnown RBP10.31□□□□□ -0.76
VPS25-203ENST00000589520 GDPD4Q6W3E5 623 aa10.31□□□□□ -0.76
VPS25-203ENST00000589520 MACC1Q6ZN28 852 aa10.31□□□□□ -0.76
VPS25-203ENST00000589520 CHSY3Q70JA7 882 aa10.31□□□□□ -0.76
VPS25-203ENST00000589520 Q7L0L9 218 aa10.31□□□□□ -0.76
VPS25-203ENST00000589520 ADAMTSL2Q86TH1 951 aa10.31□□□□□ -0.76
VPS25-203ENST00000589520 PIM3Q86V86 326 aa10.31□□□□□ -0.76
VPS25-203ENST00000589520 SERPINA9Q86WD7 417 aa10.31□□□□□ -0.76
VPS25-203ENST00000589520 PIANPQ8IYJ0 282 aa10.31□□□□□ -0.76
VPS25-203ENST00000589520 C7orf61Q8IZ16 206 aa10.31□□□□□ -0.76
VPS25-203ENST00000589520 PTGR2Q8N8N7 351 aaPredicted RBP10.31□□□□□ -0.76
VPS25-203ENST00000589520 ENDOVQ8N8Q3 282 aaKnown RBP10.31□□□□□ -0.76
VPS25-203ENST00000589520 TTC16Q8NEE8 873 aa10.31□□□□□ -0.76
VPS25-203ENST00000589520 OSCP1Q8WVF1 389 aa10.31□□□□□ -0.76
VPS25-203ENST00000589520 BHMTQ93088 406 aa10.31□□□□□ -0.76
VPS25-203ENST00000589520 PTERQ96BW5 349 aa10.31□□□□□ -0.76
VPS25-203ENST00000589520 TCEAL4Q96EI5 215 aa10.31□□□□□ -0.76
VPS25-203ENST00000589520 PHF21BQ96EK2 531 aa10.31□□□□□ -0.76
VPS25-203ENST00000589520 PRR11Q96HE9 360 aaPredicted RBP10.31□□□□□ -0.76
VPS25-203ENST00000589520 PANX3Q96QZ0 392 aa10.31□□□□□ -0.76
VPS25-203ENST00000589520 OR52B2Q96RD2 323 aa10.31□□□□□ -0.76
VPS25-203ENST00000589520 SERPINI1Q99574 410 aa10.31□□□□□ -0.76
VPS25-203ENST00000589520 CDCA3Q99618 268 aaPredicted RBP10.31□□□□□ -0.76
VPS25-203ENST00000589520 HEPHQ9BQS7 1158 aa10.31□□□□□ -0.76
VPS25-203ENST00000589520 C17orf80Q9BSJ5 609 aa10.31□□□□□ -0.76
VPS25-203ENST00000589520 RNPEPL1Q9HAU8 725 aa10.31□□□□□ -0.76
VPS25-203ENST00000589520 PIDD1Q9HB75 910 aa10.31□□□□□ -0.76
VPS25-203ENST00000589520 BPIFA1Q9NP55 256 aa10.31□□□□□ -0.76
VPS25-203ENST00000589520 MRPL40Q9NQ50 206 aaKnown RBP10.31□□□□□ -0.76
VPS25-203ENST00000589520 TMEM45AQ9NWC5 275 aa10.31□□□□□ -0.76
VPS25-203ENST00000589520 HCFC1R1Q9NWW0 138 aa10.31□□□□□ -0.76
VPS25-203ENST00000589520 NUDT4Q9NZJ9 180 aa10.31□□□□□ -0.76
VPS25-203ENST00000589520 PKD2L2Q9NZM6 624 aa10.31□□□□□ -0.76
VPS25-203ENST00000589520 CRLS1Q9UJA2 301 aa10.31□□□□□ -0.76
VPS25-203ENST00000589520 PLA2G4CQ9UP65 541 aa10.31□□□□□ -0.76
VPS25-203ENST00000589520 ERVW-1Q9UQF0 538 aa10.31□□□□□ -0.76
VPS25-203ENST00000589520 FAM50BQ9Y247 325 aa10.31□□□□□ -0.76
VPS25-203ENST00000589520 MED16Q9Y2X0 877 aa10.31□□□□□ -0.76
VPS25-203ENST00000589520 TSPAN11A1L157 253 aa10.3□□□□□ -0.76
VPS25-203ENST00000589520 NEMP2A6NFY4 417 aa10.3□□□□□ -0.76
VPS25-203ENST00000589520 E9PBE3 544 aa10.3□□□□□ -0.76
VPS25-203ENST00000589520 QSOX1O00391 747 aa10.3□□□□□ -0.76
VPS25-203ENST00000589520 SCAMP3O14828 347 aaKnown RBP10.3□□□□□ -0.76
VPS25-203ENST00000589520 GIPC1O14908 333 aa10.3□□□□□ -0.76
VPS25-203ENST00000589520 KPNA5O15131 536 aa10.3□□□□□ -0.76
VPS25-203ENST00000589520 DCXO43602 365 aa10.3□□□□□ -0.76
VPS25-203ENST00000589520 KLHL41O60662 606 aa10.3□□□□□ -0.76
VPS25-203ENST00000589520 CLDN7O95471 211 aa10.3□□□□□ -0.76
VPS25-203ENST00000589520 S100BP04271 92 aaPredicted RBP10.3□□□□□ -0.76
VPS25-203ENST00000589520 ALPIP09923 528 aa10.3□□□□□ -0.76
VPS25-203ENST00000589520 MTHFD2P13995 350 aa10.3□□□□□ -0.76
VPS25-203ENST00000589520 EPCAMP16422 314 aa10.3□□□□□ -0.76
VPS25-203ENST00000589520 CTPS1P17812 591 aa10.3□□□□□ -0.76
VPS25-203ENST00000589520 KCNA5P22460 613 aa10.3□□□□□ -0.76
VPS25-203ENST00000589520 KCNC1P48547 511 aa10.3□□□□□ -0.76
VPS25-203ENST00000589520 CLCN7P51798 805 aa10.3□□□□□ -0.76
VPS25-203ENST00000589520 CCNHP51946 323 aaPredicted RBP10.3□□□□□ -0.76
VPS25-203ENST00000589520 CCNG1P51959 295 aa10.3□□□□□ -0.76
VPS25-203ENST00000589520 GRIK2Q13002 908 aa10.3□□□□□ -0.76
VPS25-203ENST00000589520 LCP2Q13094 533 aa10.3□□□□□ -0.76
VPS25-203ENST00000589520 STX5Q13190 355 aa10.3□□□□□ -0.76
VPS25-203ENST00000589520 GPM6BQ13491 265 aa10.3□□□□□ -0.76
VPS25-203ENST00000589520 CAMK1Q14012 370 aa10.3□□□□□ -0.76
VPS25-203ENST00000589520 SQLEQ14534 574 aa10.3□□□□□ -0.76
VPS25-203ENST00000589520 OR4D1Q15615 310 aa10.3□□□□□ -0.76
VPS25-203ENST00000589520 PFKFB4Q16877 469 aa10.3□□□□□ -0.76
VPS25-203ENST00000589520 SETMARQ53H47 684 aaPredicted RBP10.3□□□□□ -0.76
VPS25-203ENST00000589520 LY6G5CQ5SRR4 150 aa10.3□□□□□ -0.76
VPS25-203ENST00000589520 NXNQ6DKJ4 435 aa10.3□□□□□ -0.76
VPS25-203ENST00000589520 CRTC1Q6UUV9 634 aa10.3□□□□□ -0.76
VPS25-203ENST00000589520 ADIPOR2Q86V24 386 aa10.3□□□□□ -0.76
VPS25-203ENST00000589520 GPSM1Q86YR5 675 aa10.3□□□□□ -0.76
VPS25-203ENST00000589520 OR56A4Q8NGH8 313 aa10.3□□□□□ -0.76
VPS25-203ENST00000589520 MAPK15Q8TD08 544 aa10.3□□□□□ -0.76
VPS25-203ENST00000589520 CD200R1Q8TD46 325 aa10.3□□□□□ -0.76
VPS25-203ENST00000589520 AGAP11Q8TF27 550 aa10.3□□□□□ -0.76
VPS25-203ENST00000589520 ZNF707Q96C28 371 aaPredicted RBP10.3□□□□□ -0.76
VPS25-203ENST00000589520 TIFAQ96CG3 184 aa10.3□□□□□ -0.76
VPS25-203ENST00000589520 EID2BQ96D98 161 aa10.3□□□□□ -0.76
VPS25-203ENST00000589520 NUSAP1Q9BXS6 441 aaKnown RBP10.3□□□□□ -0.76
VPS25-203ENST00000589520 ZNF385DQ9H6B1 395 aa10.3□□□□□ -0.76
VPS25-203ENST00000589520 EFCAB1Q9HAE3 211 aa10.3□□□□□ -0.76
VPS25-203ENST00000589520 ZBTB26Q9HCK0 441 aa10.3□□□□□ -0.76
VPS25-203ENST00000589520 CYP4F12Q9HCS2 524 aa10.3□□□□□ -0.76
VPS25-203ENST00000589520 IL26Q9NPH9 171 aa10.3□□□□□ -0.76
VPS25-203ENST00000589520 SPATS2LQ9NUQ6 558 aaKnown RBP10.3□□□□□ -0.76
VPS25-203ENST00000589520 DZANK1Q9NVP4 752 aa10.3□□□□□ -0.76
VPS25-203ENST00000589520 ZDHHC3Q9NYG2 299 aa10.3□□□□□ -0.76
VPS25-203ENST00000589520 UTP6Q9NYH9 597 aaKnown RBP10.3□□□□□ -0.76
VPS25-203ENST00000589520 NOP53Q9NZM5 478 aaKnown RBP10.3□□□□□ -0.76
VPS25-203ENST00000589520 DKK3Q9UBP4 350 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms