RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 SPTY2D1-AS1A0A0U1RR47 76 aa10.61□□□□□ -0.71
SMARCA4-213ENST00000587988 CACNB4O00305 520 aaPredicted RBP10.61□□□□□ -0.71
SMARCA4-213ENST00000587988 TOR1BO14657 336 aa10.61□□□□□ -0.71
SMARCA4-213ENST00000587988 KHNYNO15037 678 aaKnown RBP10.61□□□□□ -0.71
SMARCA4-213ENST00000587988 EIF3HO15372 352 aaKnown RBP eCLIP10.61□□□□□ -0.71
SMARCA4-213ENST00000587988 SLC25A14O95258 325 aaPredicted RBP10.61□□□□□ -0.71
SMARCA4-213ENST00000587988 F7P08709 466 aaPredicted RBP10.61□□□□□ -0.71
SMARCA4-213ENST00000587988 ZNF806P0C7X5 589 aa10.61□□□□□ -0.71
SMARCA4-213ENST00000587988 MYBL2P10244 700 aa10.61□□□□□ -0.71
SMARCA4-213ENST00000587988 ITGALP20701 1170 aa10.61□□□□□ -0.71
SMARCA4-213ENST00000587988 TGM1P22735 817 aa10.61□□□□□ -0.71
SMARCA4-213ENST00000587988 THOP1P52888 689 aa10.61□□□□□ -0.71
SMARCA4-213ENST00000587988 KIAA1024LP59773 190 aa10.61□□□□□ -0.71
SMARCA4-213ENST00000587988 CACNG1Q06432 222 aa10.61□□□□□ -0.71
SMARCA4-213ENST00000587988 EIF2B5Q13144 721 aaKnown RBP10.61□□□□□ -0.71
SMARCA4-213ENST00000587988 CUL1Q13616 776 aa10.61□□□□□ -0.71
SMARCA4-213ENST00000587988 ITGA9Q13797 1035 aa10.61□□□□□ -0.71
SMARCA4-213ENST00000587988 NAA30Q147X3 362 aaPredicted RBP10.61□□□□□ -0.71
SMARCA4-213ENST00000587988 CRYMQ14894 314 aa10.61□□□□□ -0.71
SMARCA4-213ENST00000587988 SF3A2Q15428 464 aaKnown RBP10.61□□□□□ -0.71
SMARCA4-213ENST00000587988 ERCC6LQ2NKX8 1250 aa10.61□□□□□ -0.71
SMARCA4-213ENST00000587988 ZNF542PQ5EBM4 170 aa10.61□□□□□ -0.71
SMARCA4-213ENST00000587988 GPRC6AQ5T6X5 926 aa10.61□□□□□ -0.71
SMARCA4-213ENST00000587988 ARMC3Q5W041 872 aa10.61□□□□□ -0.71
SMARCA4-213ENST00000587988 STEAP4Q687X5 459 aa10.61□□□□□ -0.71
SMARCA4-213ENST00000587988 KIAA0930Q6ICG6 404 aaPredicted RBP10.61□□□□□ -0.71
SMARCA4-213ENST00000587988 DOK6Q6PKX4 331 aa10.61□□□□□ -0.71
SMARCA4-213ENST00000587988 AFTPHQ6ULP2 937 aa10.61□□□□□ -0.71
SMARCA4-213ENST00000587988 UNC5AQ6ZN44 842 aa10.61□□□□□ -0.71
SMARCA4-213ENST00000587988 TAS2R42Q7RTR8 314 aa10.61□□□□□ -0.71
SMARCA4-213ENST00000587988 RABEPKQ7Z6M1 372 aa10.61□□□□□ -0.71
SMARCA4-213ENST00000587988 LDB1Q86U70 411 aaPredicted RBP10.61□□□□□ -0.71
SMARCA4-213ENST00000587988 GSPT2Q8IYD1 628 aaKnown RBP10.61□□□□□ -0.71
SMARCA4-213ENST00000587988 OR2I1PQ8NGU4 316 aa10.61□□□□□ -0.71
SMARCA4-213ENST00000587988 OR4L1Q8NH43 312 aa10.61□□□□□ -0.71
SMARCA4-213ENST00000587988 NAT14Q8WUY8 206 aa10.61□□□□□ -0.71
SMARCA4-213ENST00000587988 TSACCQ96A04 125 aaPredicted RBP10.61□□□□□ -0.71
SMARCA4-213ENST00000587988 SGSM3Q96HU1 749 aa10.61□□□□□ -0.71
SMARCA4-213ENST00000587988 C9orf72Q96LT7 481 aa10.61□□□□□ -0.71
SMARCA4-213ENST00000587988 WDR92Q96MX6 357 aa10.61□□□□□ -0.71
SMARCA4-213ENST00000587988 VPS35Q96QK1 796 aa10.61□□□□□ -0.71
SMARCA4-213ENST00000587988 FAM129AQ9BZQ8 928 aa10.61□□□□□ -0.71
SMARCA4-213ENST00000587988 FOXP3Q9BZS1 431 aa10.61□□□□□ -0.71
SMARCA4-213ENST00000587988 FGF22Q9HCT0 170 aa10.61□□□□□ -0.71
SMARCA4-213ENST00000587988 SMOXQ9NWM0 555 aa10.61□□□□□ -0.71
SMARCA4-213ENST00000587988 ATXN10Q9UBB4 475 aa10.61□□□□□ -0.71
SMARCA4-213ENST00000587988 ZC3H7BQ9UGR2 993 aaKnown RBP10.61□□□□□ -0.71
SMARCA4-213ENST00000587988 KLF15Q9UIH9 416 aa10.61□□□□□ -0.71
SMARCA4-213ENST00000587988 CRLS1Q9UJA2 301 aa10.61□□□□□ -0.71
SMARCA4-213ENST00000587988 PCYT1BQ9Y5K3 369 aaPredicted RBP10.61□□□□□ -0.71
SMARCA4-213ENST00000587988 VPS13AQ96RL7 3174 aa10.61□□□□□ -0.71
SMARCA4-213ENST00000587988 LRP4O75096 1905 aa10.6□□□□□ -0.71
SMARCA4-213ENST00000587988 ARHGAP33O14559 1287 aa10.6□□□□□ -0.71
SMARCA4-213ENST00000587988 SCAMP1O15126 338 aa10.6□□□□□ -0.71
SMARCA4-213ENST00000587988 MAGEC1O60732 1142 aa10.6□□□□□ -0.71
SMARCA4-213ENST00000587988 ASMTLO95671 621 aa10.6□□□□□ -0.71
SMARCA4-213ENST00000587988 CEACAM5P06731 702 aa10.6□□□□□ -0.71
SMARCA4-213ENST00000587988 POLBP06746 335 aa10.6□□□□□ -0.71
SMARCA4-213ENST00000587988 FAM153BP0C7A2 387 aa10.6□□□□□ -0.71
SMARCA4-213ENST00000587988 ENGP17813 658 aa10.6□□□□□ -0.71
SMARCA4-213ENST00000587988 ACRV1P26436 265 aa10.6□□□□□ -0.71
SMARCA4-213ENST00000587988 SSTR1P30872 391 aa10.6□□□□□ -0.71
SMARCA4-213ENST00000587988 MAGEA4P43358 317 aa10.6□□□□□ -0.71
SMARCA4-213ENST00000587988 GPX6P59796 221 aa10.6□□□□□ -0.71
SMARCA4-213ENST00000587988 B4GALNT1Q00973 533 aa10.6□□□□□ -0.71
SMARCA4-213ENST00000587988 PTK2BQ14289 1009 aa10.6□□□□□ -0.71
SMARCA4-213ENST00000587988 DBN1Q16643 649 aa10.6□□□□□ -0.71
SMARCA4-213ENST00000587988 ALG11Q2TAA5 492 aa10.6□□□□□ -0.71
SMARCA4-213ENST00000587988 HLA-BQ31612 363 aa10.6□□□□□ -0.71
SMARCA4-213ENST00000587988 FAM153CQ494X1 144 aa10.6□□□□□ -0.71
SMARCA4-213ENST00000587988 GPR33Q49SQ1 333 aa10.6□□□□□ -0.71
SMARCA4-213ENST00000587988 FASTKD1Q53R41 847 aaKnown RBP10.6□□□□□ -0.71
SMARCA4-213ENST00000587988 SPANXN3Q5MJ09 141 aa10.6□□□□□ -0.71
SMARCA4-213ENST00000587988 UBAP2Q5T6F2 1119 aaKnown RBP10.6□□□□□ -0.71
SMARCA4-213ENST00000587988 TRMT10BQ6PF06 316 aaKnown RBP10.6□□□□□ -0.71
SMARCA4-213ENST00000587988 MACC1Q6ZN28 852 aa10.6□□□□□ -0.71
SMARCA4-213ENST00000587988 CAPN12Q6ZSI9 719 aa10.6□□□□□ -0.71
SMARCA4-213ENST00000587988 MARK2Q7KZI7 788 aaKnown RBP10.6□□□□□ -0.71
SMARCA4-213ENST00000587988 ADGRG6Q86SQ4 1221 aa10.6□□□□□ -0.71
SMARCA4-213ENST00000587988 SERPINA9Q86WD7 417 aa10.6□□□□□ -0.71
SMARCA4-213ENST00000587988 DCP2Q8IU60 420 aaKnown RBP10.6□□□□□ -0.71
SMARCA4-213ENST00000587988 PHYKPLQ8IUZ5 450 aa10.6□□□□□ -0.71
SMARCA4-213ENST00000587988 CCNJLQ8IV13 435 aa10.6□□□□□ -0.71
SMARCA4-213ENST00000587988 NXPE1Q8N323 547 aa10.6□□□□□ -0.71
SMARCA4-213ENST00000587988 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.6□□□□□ -0.71
SMARCA4-213ENST00000587988 OR56A4Q8NGH8 313 aa10.6□□□□□ -0.71
SMARCA4-213ENST00000587988 GDAP1Q8TB36 358 aa10.6□□□□□ -0.71
SMARCA4-213ENST00000587988 PYROXD1Q8WU10 500 aa10.6□□□□□ -0.71
SMARCA4-213ENST00000587988 OR1E3Q8WZA6 343 aa10.6□□□□□ -0.71
SMARCA4-213ENST00000587988 UBXN4Q92575 508 aa10.6□□□□□ -0.71
SMARCA4-213ENST00000587988 RUBCNQ92622 972 aa10.6□□□□□ -0.71
SMARCA4-213ENST00000587988 SKA1Q96BD8 255 aa10.6□□□□□ -0.71
SMARCA4-213ENST00000587988 PDXPQ96GD0 296 aa10.6□□□□□ -0.71
SMARCA4-213ENST00000587988 FMO2Q99518 471 aa10.6□□□□□ -0.71
SMARCA4-213ENST00000587988 NAT9Q9BTE0 207 aa10.6□□□□□ -0.71
SMARCA4-213ENST00000587988 NUSAP1Q9BXS6 441 aaKnown RBP10.6□□□□□ -0.71
SMARCA4-213ENST00000587988 PHACTR1Q9C0D0 580 aa10.6□□□□□ -0.71
SMARCA4-213ENST00000587988 OR2AG1Q9H205 316 aa10.6□□□□□ -0.71
SMARCA4-213ENST00000587988 TCEAL2Q9H3H9 227 aaPredicted RBP10.6□□□□□ -0.71
SMARCA4-213ENST00000587988 IL21RQ9HBE5 538 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms