RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 RHDQ02161 417 aa7.83□□□□□ -1.16
VMP1-204ENST00000587259 OVGP1Q12889 678 aa7.83□□□□□ -1.16
VMP1-204ENST00000587259 SLC10A2Q12908 348 aaPredicted RBP7.83□□□□□ -1.16
VMP1-204ENST00000587259 NFATC3Q12968 1075 aa7.83□□□□□ -1.16
VMP1-204ENST00000587259 EIF2B5Q13144 721 aaKnown RBP7.83□□□□□ -1.16
VMP1-204ENST00000587259 CLN3Q13286 438 aa7.83□□□□□ -1.16
VMP1-204ENST00000587259 SLC12A1Q13621 1099 aa7.83□□□□□ -1.16
VMP1-204ENST00000587259 PDE1CQ14123 709 aaPredicted RBP7.83□□□□□ -1.16
VMP1-204ENST00000587259 LAPTM4AQ15012 233 aa7.83□□□□□ -1.16
VMP1-204ENST00000587259 TGIF1Q15583 401 aa7.83□□□□□ -1.16
VMP1-204ENST00000587259 BBS9Q3SYG4 887 aa7.83□□□□□ -1.16
VMP1-204ENST00000587259 PARP15Q460N3 678 aa7.83□□□□□ -1.16
VMP1-204ENST00000587259 TMEM259Q4ZIN3 620 aa7.83□□□□□ -1.16
VMP1-204ENST00000587259 TNFAIP8L3Q5GJ75 292 aa7.83□□□□□ -1.16
VMP1-204ENST00000587259 LGSNQ5TDP6 509 aa7.83□□□□□ -1.16
VMP1-204ENST00000587259 TMCO4Q5TGY1 634 aa7.83□□□□□ -1.16
VMP1-204ENST00000587259 C22orf39Q6P5X5 142 aa7.83□□□□□ -1.16
VMP1-204ENST00000587259 LRRC8BQ6P9F7 803 aa7.83□□□□□ -1.16
VMP1-204ENST00000587259 ERN2Q76MJ5 926 aaKnown RBP7.83□□□□□ -1.16
VMP1-204ENST00000587259 PARS2Q7L3T8 475 aaKnown RBP7.83□□□□□ -1.16
VMP1-204ENST00000587259 ABI3BPQ7Z7G0 1075 aa7.83□□□□□ -1.16
VMP1-204ENST00000587259 B3GNT8Q7Z7M8 397 aa7.83□□□□□ -1.16
VMP1-204ENST00000587259 CACTIN-AS1Q8N1I8 211 aa7.83□□□□□ -1.16
VMP1-204ENST00000587259 UMODL1-AS1Q8N2C9 162 aa7.83□□□□□ -1.16
VMP1-204ENST00000587259 BBS5Q8N3I7 341 aa7.83□□□□□ -1.16
VMP1-204ENST00000587259 EXD3Q8N9H8 876 aa7.83□□□□□ -1.16
VMP1-204ENST00000587259 FBXO36Q8NEA4 188 aa7.83□□□□□ -1.16
VMP1-204ENST00000587259 OR2W6PQ8NHA6 318 aa7.83□□□□□ -1.16
VMP1-204ENST00000587259 CDKL2Q92772 493 aa7.83□□□□□ -1.16
VMP1-204ENST00000587259 ARL8AQ96BM9 186 aa7.83□□□□□ -1.16
VMP1-204ENST00000587259 C9orf72Q96LT7 481 aa7.83□□□□□ -1.16
VMP1-204ENST00000587259 SPON2Q9BUD6 331 aa7.83□□□□□ -1.16
VMP1-204ENST00000587259 TMUB1Q9BVT8 246 aa7.83□□□□□ -1.16
VMP1-204ENST00000587259 MAGEB5Q9BZ81 275 aa7.83□□□□□ -1.16
VMP1-204ENST00000587259 TM6SF2Q9BZW4 377 aa7.83□□□□□ -1.16
VMP1-204ENST00000587259 CLMPQ9H6B4 373 aa7.83□□□□□ -1.16
VMP1-204ENST00000587259 ACSS3Q9H6R3 686 aa7.83□□□□□ -1.16
VMP1-204ENST00000587259 LRRC40Q9H9A6 602 aa7.83□□□□□ -1.16
VMP1-204ENST00000587259 ETNK1Q9HBU6 452 aa7.83□□□□□ -1.16
VMP1-204ENST00000587259 LRRC4CQ9HCJ2 640 aa7.83□□□□□ -1.16
VMP1-204ENST00000587259 TMEM248Q9NWD8 314 aa7.83□□□□□ -1.16
VMP1-204ENST00000587259 IL36AQ9UHA7 158 aa7.83□□□□□ -1.16
VMP1-204ENST00000587259 RSPH14Q9UHP6 348 aa7.83□□□□□ -1.16
VMP1-204ENST00000587259 NOVA2Q9UNW9 492 aaKnown RBP7.83□□□□□ -1.16
VMP1-204ENST00000587259 FCF1Q9Y324 198 aaKnown RBP7.83□□□□□ -1.16
VMP1-204ENST00000587259 TEX264Q9Y6I9 313 aa7.83□□□□□ -1.16
VMP1-204ENST00000587259 WASF2Q9Y6W5 498 aa7.83□□□□□ -1.16
VMP1-204ENST00000587259 IQANK1A0A1B0GTG1 560 aa7.82□□□□□ -1.16
VMP1-204ENST00000587259 TLDC2A0PJX2 215 aa7.82□□□□□ -1.16
VMP1-204ENST00000587259 MAGEB16A2A368 324 aa7.82□□□□□ -1.16
VMP1-204ENST00000587259 FAM72CH0Y354 149 aa7.82□□□□□ -1.16
VMP1-204ENST00000587259 GOLGA8MH3BSY2 632 aa7.82□□□□□ -1.16
VMP1-204ENST00000587259 LCE2BO14633 110 aa7.82□□□□□ -1.16
VMP1-204ENST00000587259 GPR37O15354 613 aa7.82□□□□□ -1.16
VMP1-204ENST00000587259 DXOO77932 396 aaKnown RBP7.82□□□□□ -1.16
VMP1-204ENST00000587259 SUN1O94901 812 aa7.82□□□□□ -1.16
VMP1-204ENST00000587259 TNFSF15O95150 251 aa7.82□□□□□ -1.16
VMP1-204ENST00000587259 AP2A1O95782 977 aa7.82□□□□□ -1.16
VMP1-204ENST00000587259 S1PR4O95977 384 aa7.82□□□□□ -1.16
VMP1-204ENST00000587259 SHBGP04278 402 aa7.82□□□□□ -1.16
VMP1-204ENST00000587259 INHBAP08476 426 aa7.82□□□□□ -1.16
VMP1-204ENST00000587259 ALPPL2P10696 532 aa7.82□□□□□ -1.16
VMP1-204ENST00000587259 JUNDP17535 347 aa7.82□□□□□ -1.16
VMP1-204ENST00000587259 PTPN3P26045 913 aa7.82□□□□□ -1.16
VMP1-204ENST00000587259 CNTFP26441 200 aa7.82□□□□□ -1.16
VMP1-204ENST00000587259 HPDP32754 393 aaPredicted RBP7.82□□□□□ -1.16
VMP1-204ENST00000587259 ABL2P42684 1182 aa7.82□□□□□ -1.16
VMP1-204ENST00000587259 RENBPP51606 427 aa7.82□□□□□ -1.16
VMP1-204ENST00000587259 SLC18A1P54219 525 aa7.82□□□□□ -1.16
VMP1-204ENST00000587259 RP1P56715 2156 aa7.82□□□□□ -1.16
VMP1-204ENST00000587259 ERVPABLB-1P60509 514 aa7.82□□□□□ -1.16
VMP1-204ENST00000587259 MAGOHP61326 146 aaKnown RBP7.82□□□□□ -1.16
VMP1-204ENST00000587259 ILF2Q12905 390 aaKnown RBP7.82□□□□□ -1.16
VMP1-204ENST00000587259 TEX44Q53QW1 395 aa7.82□□□□□ -1.16
VMP1-204ENST00000587259 FAM72AQ5TYM5 149 aa7.82□□□□□ -1.16
VMP1-204ENST00000587259 ANKRD22Q5VYY1 191 aa7.82□□□□□ -1.16
VMP1-204ENST00000587259 AFMIDQ63HM1 303 aa7.82□□□□□ -1.16
VMP1-204ENST00000587259 KCTD16Q68DU8 428 aa7.82□□□□□ -1.16
VMP1-204ENST00000587259 FAM72DQ6L9T8 149 aa7.82□□□□□ -1.16
VMP1-204ENST00000587259 C3orf62Q6ZUJ4 267 aa7.82□□□□□ -1.16
VMP1-204ENST00000587259 CYS1Q717R9 158 aa7.82□□□□□ -1.16
VMP1-204ENST00000587259 PID1Q7Z2X4 250 aa7.82□□□□□ -1.16
VMP1-204ENST00000587259 PRUNE1Q86TP1 453 aa7.82□□□□□ -1.16
VMP1-204ENST00000587259 FAM72BQ86X60 149 aa7.82□□□□□ -1.16
VMP1-204ENST00000587259 SFTPA2Q8IWL1 248 aa7.82□□□□□ -1.16
VMP1-204ENST00000587259 SLC35F3Q8IY50 421 aa7.82□□□□□ -1.16
VMP1-204ENST00000587259 ZNF683Q8IZ20 524 aa7.82□□□□□ -1.16
VMP1-204ENST00000587259 ZNF567Q8N184 647 aa7.82□□□□□ -1.16
VMP1-204ENST00000587259 NPWQ8N729 165 aa7.82□□□□□ -1.16
VMP1-204ENST00000587259 GABPB2Q8TAK5 448 aaPredicted RBP7.82□□□□□ -1.16
VMP1-204ENST00000587259 GSDMBQ8TAX9 411 aa7.82□□□□□ -1.16
VMP1-204ENST00000587259 EPS8L3Q8TE67 593 aaKnown RBP7.82□□□□□ -1.16
VMP1-204ENST00000587259 CENPTQ96BT3 561 aa7.82□□□□□ -1.16
VMP1-204ENST00000587259 ALKBH8Q96BT7 664 aaKnown RBP7.82□□□□□ -1.16
VMP1-204ENST00000587259 MTBPQ96DY7 904 aa7.82□□□□□ -1.16
VMP1-204ENST00000587259 SLC46A1Q96NT5 459 aa7.82□□□□□ -1.16
VMP1-204ENST00000587259 KLF6Q99612 283 aaPredicted RBP7.82□□□□□ -1.16
VMP1-204ENST00000587259 SLC17A9Q9BYT1 436 aa7.82□□□□□ -1.16
VMP1-204ENST00000587259 ZDHHC6Q9H6R6 413 aa7.82□□□□□ -1.16
VMP1-204ENST00000587259 SSU72Q9NP77 194 aaKnown RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms