RNA–Protein interactions for RNA: ENST00000584250.1

TTC39C-209, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 1 (best) BASIC

Gene TTC39C, Length 1,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-209ENST00000584250 GP1BAP07359 652 aa24.61■■□□□ 1.53
TTC39C-209ENST00000584250 JUPP14923 745 aa24.61■■□□□ 1.53
TTC39C-209ENST00000584250 STIP1P31948 543 aaKnown RBP24.61■■□□□ 1.53
TTC39C-209ENST00000584250 SPAM1P38567 509 aa24.61■■□□□ 1.53
TTC39C-209ENST00000584250 MAZP56270 477 aaKnown RBP24.61■■□□□ 1.53
TTC39C-209ENST00000584250 LONRF2Q1L5Z9 754 aa24.61■■□□□ 1.53
TTC39C-209ENST00000584250 GALNT13Q8IUC8 556 aa24.61■■□□□ 1.53
TTC39C-209ENST00000584250 OR4K2Q8NGD2 314 aa24.61■■□□□ 1.53
TTC39C-209ENST00000584250 OR13C4Q8NGS5 318 aa24.61■■□□□ 1.53
TTC39C-209ENST00000584250 ANP32BQ92688 251 aaKnown RBP24.61■■□□□ 1.53
TTC39C-209ENST00000584250 GLMNQ92990 594 aa24.61■■□□□ 1.53
TTC39C-209ENST00000584250 CCDC74AQ96AQ1 378 aa24.61■■□□□ 1.53
TTC39C-209ENST00000584250 STX7O15400 261 aaKnown RBP24.6■■□□□ 1.53
TTC39C-209ENST00000584250 AP2A1O95782 977 aa24.6■■□□□ 1.53
TTC39C-209ENST00000584250 MT-CO3P00414 261 aa24.6■■□□□ 1.53
TTC39C-209ENST00000584250 CDK4P11802 303 aa24.6■■□□□ 1.53
TTC39C-209ENST00000584250 ACTR1BP42025 376 aa24.6■■□□□ 1.53
TTC39C-209ENST00000584250 RPIAP49247 311 aa24.6■■□□□ 1.53
TTC39C-209ENST00000584250 ACTR1AP61163 376 aa24.6■■□□□ 1.53
TTC39C-209ENST00000584250 E2F1Q01094 437 aa24.6■■□□□ 1.53
TTC39C-209ENST00000584250 TAF1AQ15573 450 aaPredicted RBP24.6■■□□□ 1.53
TTC39C-209ENST00000584250 CDCP2Q5VXM1 449 aa24.6■■□□□ 1.53
TTC39C-209ENST00000584250 CHST15Q7LFX5 561 aaPredicted RBP24.6■■□□□ 1.53
TTC39C-209ENST00000584250 PRELID2Q8N945 189 aa24.6■■□□□ 1.53
TTC39C-209ENST00000584250 MAPK15Q8TD08 544 aa24.6■■□□□ 1.53
TTC39C-209ENST00000584250 CCDC3Q9BQI4 270 aa24.6■■□□□ 1.53
TTC39C-209ENST00000584250 TRIM39Q9HCM9 518 aa24.6■■□□□ 1.53
TTC39C-209ENST00000584250 NCKIPSDQ9NZQ3 722 aa24.6■■□□□ 1.53
TTC39C-209ENST00000584250 FKBPLQ9UIM3 349 aa24.6■■□□□ 1.53
TTC39C-209ENST00000584250 JRKLQ9Y4A0 524 aa24.6■■□□□ 1.53
TTC39C-209ENST00000584250 ZNF106Q9H2Y7 1883 aaKnown RBP24.6■■□□□ 1.53
TTC39C-209ENST00000584250 ZSCAN12O43309 604 aa24.59■■□□□ 1.53
TTC39C-209ENST00000584250 NUAK1O60285 661 aa24.59■■□□□ 1.53
TTC39C-209ENST00000584250 LPOP22079 712 aaPredicted RBP24.59■■□□□ 1.53
TTC39C-209ENST00000584250 RPL22P35268 128 aaKnown RBP24.59■■□□□ 1.53
TTC39C-209ENST00000584250 GRIA1P42261 906 aa24.59■■□□□ 1.53
TTC39C-209ENST00000584250 TMPRSS15P98073 1019 aa24.59■■□□□ 1.53
TTC39C-209ENST00000584250 HLTFQ14527 1009 aaKnown RBP eCLIP24.59■■□□□ 1.53
TTC39C-209ENST00000584250 C14orf28Q4W4Y0 310 aa24.59■■□□□ 1.53
TTC39C-209ENST00000584250 PDPK2PQ6A1A2 396 aa24.59■■□□□ 1.53
TTC39C-209ENST00000584250 CRTC3Q6UUV7 619 aa24.59■■□□□ 1.53
TTC39C-209ENST00000584250 NAGSQ8N159 534 aa24.59■■□□□ 1.53
TTC39C-209ENST00000584250 BRSK1Q8TDC3 778 aa24.59■■□□□ 1.53
TTC39C-209ENST00000584250 COG1Q8WTW3 980 aa24.59■■□□□ 1.53
TTC39C-209ENST00000584250 ZDHHC1Q8WTX9 485 aa24.59■■□□□ 1.53
TTC39C-209ENST00000584250 LRRC40Q9H9A6 602 aa24.59■■□□□ 1.53
TTC39C-209ENST00000584250 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP24.59■■□□□ 1.53
TTC39C-209ENST00000584250 KCNK6Q9Y257 313 aa24.59■■□□□ 1.53
TTC39C-209ENST00000584250 PKP3Q9Y446 797 aa24.59■■□□□ 1.53
TTC39C-209ENST00000584250 RNF215Q9Y6U7 377 aa24.59■■□□□ 1.53
TTC39C-209ENST00000584250 GLYATL1P3A0A0U1RQE8 302 aa24.58■■□□□ 1.53
TTC39C-209ENST00000584250 TRABD2BA6NFA1 517 aa24.58■■□□□ 1.53
TTC39C-209ENST00000584250 LDB2O43679 373 aa24.58■■□□□ 1.53
TTC39C-209ENST00000584250 ECEL1O95672 775 aa24.58■■□□□ 1.53
TTC39C-209ENST00000584250 CAPNS1P04632 268 aa24.58■■□□□ 1.53
TTC39C-209ENST00000584250 ACP5P13686 325 aa24.58■■□□□ 1.53
TTC39C-209ENST00000584250 ZNF140P52738 457 aaPredicted RBP24.58■■□□□ 1.53
TTC39C-209ENST00000584250 DRICH1Q6PGQ1 229 aaPredicted RBP24.58■■□□□ 1.53
TTC39C-209ENST00000584250 PHYKPLQ8IUZ5 450 aa24.58■■□□□ 1.53
TTC39C-209ENST00000584250 RASGEF1CQ8N431 466 aa24.58■■□□□ 1.53
TTC39C-209ENST00000584250 DCBLD1Q8N8Z6 715 aa24.58■■□□□ 1.53
TTC39C-209ENST00000584250 OR52K1Q8NGK4 314 aa24.58■■□□□ 1.53
TTC39C-209ENST00000584250 NAT14Q8WUY8 206 aa24.58■■□□□ 1.53
TTC39C-209ENST00000584250 NAT6Q93015 286 aa24.58■■□□□ 1.53
TTC39C-209ENST00000584250 PPP1R2P1Q96PQ5 205 aa24.58■■□□□ 1.53
TTC39C-209ENST00000584250 VPS35Q96QK1 796 aa24.58■■□□□ 1.53
TTC39C-209ENST00000584250 EVA1BQ9NVM1 165 aa24.58■■□□□ 1.53
TTC39C-209ENST00000584250 SLC23A2Q9UGH3 650 aa24.58■■□□□ 1.53
TTC39C-209ENST00000584250 CLCA2Q9UQC9 943 aa24.58■■□□□ 1.53
TTC39C-209ENST00000584250 PCDHB1Q9Y5F3 818 aa24.58■■□□□ 1.53
TTC39C-209ENST00000584250 TRBV23OR9-2A0A075B6M9 112 aa24.57■■□□□ 1.52
TTC39C-209ENST00000584250 GRID2O43424 1007 aa24.57■■□□□ 1.52
TTC39C-209ENST00000584250 XIAPP98170 497 aa24.57■■□□□ 1.52
TTC39C-209ENST00000584250 GSE1Q14687 1217 aa24.57■■□□□ 1.52
TTC39C-209ENST00000584250 PLA2G4EQ3MJ16 856 aa24.57■■□□□ 1.52
TTC39C-209ENST00000584250 CERCAMQ5T4B2 595 aa24.57■■□□□ 1.52
TTC39C-209ENST00000584250 C17orf82Q86X59 251 aaPredicted RBP24.57■■□□□ 1.52
TTC39C-209ENST00000584250 ZNF547Q8IVP9 402 aa24.57■■□□□ 1.52
TTC39C-209ENST00000584250 CCDC97Q96F63 343 aaPredicted RBP24.57■■□□□ 1.52
TTC39C-209ENST00000584250 ABCG4Q9H172 646 aa24.57■■□□□ 1.52
TTC39C-209ENST00000584250 RAB6BQ9NRW1 208 aa24.57■■□□□ 1.52
TTC39C-209ENST00000584250 DRG1Q9Y295 367 aaKnown RBP24.57■■□□□ 1.52
TTC39C-209ENST00000584250 CCDC78A2IDD5 438 aa24.56■■□□□ 1.52
TTC39C-209ENST00000584250 C2orf81A6NN90 581 aa24.56■■□□□ 1.52
TTC39C-209ENST00000584250 CHUKO15111 745 aa24.56■■□□□ 1.52
TTC39C-209ENST00000584250 PROS1P07225 676 aa24.56■■□□□ 1.52
TTC39C-209ENST00000584250 CCL7P80098 99 aa24.56■■□□□ 1.52
TTC39C-209ENST00000584250 POU6F1Q14863 301 aa24.56■■□□□ 1.52
TTC39C-209ENST00000584250 TTC27Q6P3X3 843 aa24.56■■□□□ 1.52
TTC39C-209ENST00000584250 ARL14Q8N4G2 192 aa24.56■■□□□ 1.52
TTC39C-209ENST00000584250 CCDC89Q8N998 374 aa24.56■■□□□ 1.52
TTC39C-209ENST00000584250 Q8N9G6 341 aaPredicted RBP24.56■■□□□ 1.52
TTC39C-209ENST00000584250 GDAP1Q8TB36 358 aa24.56■■□□□ 1.52
TTC39C-209ENST00000584250 MDM1Q8TC05 714 aa24.56■■□□□ 1.52
TTC39C-209ENST00000584250 DNAJC1Q96KC8 554 aaKnown RBP24.56■■□□□ 1.52
TTC39C-209ENST00000584250 AP1M1Q9BXS5 423 aa24.56■■□□□ 1.52
TTC39C-209ENST00000584250 SYNDIG1Q9H7V2 258 aa24.56■■□□□ 1.52
TTC39C-209ENST00000584250 TBC1D29Q9UFV1 150 aa24.56■■□□□ 1.52
TTC39C-209ENST00000584250 ASPMQ8IZT6 3477 aa24.55■■□□□ 1.52
TTC39C-209ENST00000584250 A0A1W2PQM1 296 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms