RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 TLX3O43711 291 aaPredicted RBP20.22■□□□□ 0.83
SS18-224ENST00000584083 ZNF189O75820 626 aaPredicted RBP20.22■□□□□ 0.83
SS18-224ENST00000584083 AGTP01019 485 aa20.22■□□□□ 0.83
SS18-224ENST00000584083 PSMB4P28070 264 aa20.22■□□□□ 0.83
SS18-224ENST00000584083 ALDH4A1P30038 563 aa20.22■□□□□ 0.83
SS18-224ENST00000584083 HMGCLP35914 325 aa20.22■□□□□ 0.83
SS18-224ENST00000584083 GLT6D1Q7Z4J2 308 aa20.22■□□□□ 0.83
SS18-224ENST00000584083 C17orf82Q86X59 251 aaPredicted RBP20.22■□□□□ 0.83
SS18-224ENST00000584083 PHYKPLQ8IUZ5 450 aa20.22■□□□□ 0.83
SS18-224ENST00000584083 NAGSQ8N159 534 aa20.22■□□□□ 0.83
SS18-224ENST00000584083 TTC30BQ8N4P2 665 aa20.22■□□□□ 0.83
SS18-224ENST00000584083 CCDC112Q8NEF3 446 aa20.22■□□□□ 0.83
SS18-224ENST00000584083 CCDC110Q8TBZ0 833 aa20.22■□□□□ 0.83
SS18-224ENST00000584083 HES6Q96HZ4 224 aa20.22■□□□□ 0.83
SS18-224ENST00000584083 SPATA13Q96N96 652 aa20.22■□□□□ 0.83
SS18-224ENST00000584083 PLEKHG4BQ96PX9 1271 aa20.22■□□□□ 0.83
SS18-224ENST00000584083 FOXP3Q9BZS1 431 aa20.22■□□□□ 0.83
SS18-224ENST00000584083 CARD9Q9H257 536 aa20.22■□□□□ 0.83
SS18-224ENST00000584083 EPB41L5Q9HCM4 733 aa20.22■□□□□ 0.83
SS18-224ENST00000584083 ATXN7L1Q9ULK2 861 aaPredicted RBP20.22■□□□□ 0.83
SS18-224ENST00000584083 AAR2Q9Y312 384 aaKnown RBP20.22■□□□□ 0.83
SS18-224ENST00000584083 PCYT1BQ9Y5K3 369 aaPredicted RBP20.22■□□□□ 0.83
SS18-224ENST00000584083 DSPP15924 2871 aaKnown RBP20.22■□□□□ 0.83
SS18-224ENST00000584083 TRBV23OR9-2A0A075B6M9 112 aa20.21■□□□□ 0.83
SS18-224ENST00000584083 TMX2-CTNND1H3BSU7 103 aa20.21■□□□□ 0.83
SS18-224ENST00000584083 ZW10O43264 779 aa20.21■□□□□ 0.83
SS18-224ENST00000584083 GRID2O43424 1007 aa20.21■□□□□ 0.83
SS18-224ENST00000584083 NUAK1O60285 661 aa20.21■□□□□ 0.83
SS18-224ENST00000584083 ACP5P13686 325 aa20.21■□□□□ 0.83
SS18-224ENST00000584083 ZNF8P17098 575 aaPredicted RBP20.21■□□□□ 0.83
SS18-224ENST00000584083 RBMS1P29558 406 aaKnown RBP20.21■□□□□ 0.83
SS18-224ENST00000584083 TBC1D25Q3MII6 688 aa20.21■□□□□ 0.83
SS18-224ENST00000584083 B3GNT8Q7Z7M8 397 aa20.21■□□□□ 0.83
SS18-224ENST00000584083 TMEM74Q96NL1 305 aa20.21■□□□□ 0.83
SS18-224ENST00000584083 STRADBQ9C0K7 418 aa20.21■□□□□ 0.83
SS18-224ENST00000584083 KCNK6Q9Y257 313 aa20.21■□□□□ 0.83
SS18-224ENST00000584083 PKP3Q9Y446 797 aa20.21■□□□□ 0.83
SS18-224ENST00000584083 CCDC187A0A096LP49 1063 aa20.2■□□□□ 0.82
SS18-224ENST00000584083 RRP8O43159 456 aaKnown RBP20.2■□□□□ 0.82
SS18-224ENST00000584083 BUD23O43709 281 aaKnown RBP20.2■□□□□ 0.82
SS18-224ENST00000584083 PDX1P52945 283 aa20.2■□□□□ 0.82
SS18-224ENST00000584083 INHBCP55103 352 aa20.2■□□□□ 0.82
SS18-224ENST00000584083 OR1D5P58170 312 aa20.2■□□□□ 0.82
SS18-224ENST00000584083 AMZ1Q400G9 498 aa20.2■□□□□ 0.82
SS18-224ENST00000584083 ZDHHC20Q5W0Z9 365 aa20.2■□□□□ 0.82
SS18-224ENST00000584083 LRRC69Q6ZNQ3 347 aa20.2■□□□□ 0.82
SS18-224ENST00000584083 ADGRG6Q86SQ4 1221 aa20.2■□□□□ 0.82
SS18-224ENST00000584083 WDR36Q8NI36 951 aaKnown RBP20.2■□□□□ 0.82
SS18-224ENST00000584083 GDAP1Q8TB36 358 aa20.2■□□□□ 0.82
SS18-224ENST00000584083 ZNF578Q96N58 590 aaPredicted RBP20.2■□□□□ 0.82
SS18-224ENST00000584083 PPP1R2P1Q96PQ5 205 aa20.2■□□□□ 0.82
SS18-224ENST00000584083 APOL2Q9BQE5 337 aa20.2■□□□□ 0.82
SS18-224ENST00000584083 GORASP1Q9BQQ3 440 aa20.2■□□□□ 0.82
SS18-224ENST00000584083 IL17CQ9P0M4 197 aa20.2■□□□□ 0.82
SS18-224ENST00000584083 LHX6Q9UPM6 363 aa20.2■□□□□ 0.82
SS18-224ENST00000584083 A0A087WV48 116 aa20.19■□□□□ 0.82
SS18-224ENST00000584083 A0A1W2PNU3 283 aaPredicted RBP20.19■□□□□ 0.82
SS18-224ENST00000584083 TCRBV7S2A1N4TA0A589 114 aa20.19■□□□□ 0.82
SS18-224ENST00000584083 GPR89AB7ZAQ6 455 aa20.19■□□□□ 0.82
SS18-224ENST00000584083 B4GAT1O43505 415 aa20.19■□□□□ 0.82
SS18-224ENST00000584083 SNX2O60749 519 aa20.19■□□□□ 0.82
SS18-224ENST00000584083 DXOO77932 396 aaKnown RBP20.19■□□□□ 0.82
SS18-224ENST00000584083 GPR89BP0CG08 455 aa20.19■□□□□ 0.82
SS18-224ENST00000584083 SPAM1P38567 509 aa20.19■□□□□ 0.82
SS18-224ENST00000584083 EIF2S3P41091 472 aaKnown RBP20.19■□□□□ 0.82
SS18-224ENST00000584083 B4GALNT1Q00973 533 aa20.19■□□□□ 0.82
SS18-224ENST00000584083 KLF1Q13351 362 aaPredicted RBP20.19■□□□□ 0.82
SS18-224ENST00000584083 MAP9Q49MG5 647 aa20.19■□□□□ 0.82
SS18-224ENST00000584083 ATP13A5Q4VNC0 1218 aa20.19■□□□□ 0.82
SS18-224ENST00000584083 CRTC3Q6UUV7 619 aa20.19■□□□□ 0.82
SS18-224ENST00000584083 RANBP10Q6VN20 620 aa20.19■□□□□ 0.82
SS18-224ENST00000584083 ARHGEF18Q6ZSZ5 1173 aa20.19■□□□□ 0.82
SS18-224ENST00000584083 ZNF438Q7Z4V0 828 aa20.19■□□□□ 0.82
SS18-224ENST00000584083 FAM71DQ8N9W8 422 aa20.19■□□□□ 0.82
SS18-224ENST00000584083 SNIP1Q8TAD8 396 aaKnown RBP20.19■□□□□ 0.82
SS18-224ENST00000584083 LRRC45Q96CN5 670 aa20.19■□□□□ 0.82
SS18-224ENST00000584083 IL26Q9NPH9 171 aa20.19■□□□□ 0.82
SS18-224ENST00000584083 THSD1Q9NS62 852 aa20.19■□□□□ 0.82
SS18-224ENST00000584083 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.19■□□□□ 0.822e-6■■□□□ 12
SS18-224ENST00000584083 TBC1D29Q9UFV1 150 aa20.19■□□□□ 0.82
SS18-224ENST00000584083 R3HDM2Q9Y2K5 976 aaKnown RBP20.19■□□□□ 0.82
SS18-224ENST00000584083 C5orf60A6NFR6 353 aa20.18■□□□□ 0.82
SS18-224ENST00000584083 PPM1DO15297 605 aa20.18■□□□□ 0.82
SS18-224ENST00000584083 STX7O15400 261 aaKnown RBP20.18■□□□□ 0.82
SS18-224ENST00000584083 VEGFDO43915 354 aa20.18■□□□□ 0.82
SS18-224ENST00000584083 MTX2O75431 263 aa20.18■□□□□ 0.82
SS18-224ENST00000584083 EML2O95834 649 aa20.18■□□□□ 0.82
SS18-224ENST00000584083 CCDC175P0C221 793 aa20.18■□□□□ 0.82
SS18-224ENST00000584083 GPR3P46089 330 aa20.18■□□□□ 0.82
SS18-224ENST00000584083 OLIG2Q13516 323 aa20.18■□□□□ 0.82
SS18-224ENST00000584083 CHRNA6Q15825 494 aa20.18■□□□□ 0.82
SS18-224ENST00000584083 COL28A1Q2UY09 1125 aa20.18■□□□□ 0.82
SS18-224ENST00000584083 SEL1L2Q5TEA6 688 aa20.18■□□□□ 0.82
SS18-224ENST00000584083 FAM151BQ6UXP7 276 aa20.18■□□□□ 0.82
SS18-224ENST00000584083 USP53Q70EK8 1073 aa20.18■□□□□ 0.82
SS18-224ENST00000584083 PIM3Q86V86 326 aa20.18■□□□□ 0.82
SS18-224ENST00000584083 SLC37A2Q8TED4 501 aa20.18■□□□□ 0.82
SS18-224ENST00000584083 LIN37Q96GY3 246 aaPredicted RBP20.18■□□□□ 0.82
SS18-224ENST00000584083 VPS35Q96QK1 796 aa20.18■□□□□ 0.82
SS18-224ENST00000584083 OSGEPL1Q9H4B0 414 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms