RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 CCDC77Q9BR77 488 aa15.41■□□□□ 0.06
SS18-216ENST00000580751 EDEM2Q9BV94 578 aa15.41■□□□□ 0.06
SS18-216ENST00000580751 KIFC1Q9BW19 673 aa15.41■□□□□ 0.06
SS18-216ENST00000580751 GTPBP2Q9BX10 602 aaKnown RBP15.41■□□□□ 0.06
SS18-216ENST00000580751 IL26Q9NPH9 171 aa15.41■□□□□ 0.06
SS18-216ENST00000580751 ZC3H7BQ9UGR2 993 aaKnown RBP15.41■□□□□ 0.06
SS18-216ENST00000580751 FNDC3AQ9Y2H6 1198 aaKnown RBP15.41■□□□□ 0.06
SS18-216ENST00000580751 TCAF1Q9Y4C2 921 aa15.41■□□□□ 0.06
SS18-216ENST00000580751 KCTD3Q9Y597 815 aa15.41■□□□□ 0.06
SS18-216ENST00000580751 ZNF106Q9H2Y7 1883 aaKnown RBP15.4■□□□□ 0.06
SS18-216ENST00000580751 A0A087WUV0 522 aaPredicted RBP15.4■□□□□ 0.06
SS18-216ENST00000580751 YKT6O15498 198 aa15.4■□□□□ 0.06
SS18-216ENST00000580751 AVILO75366 819 aa15.4■□□□□ 0.06
SS18-216ENST00000580751 TCEA3O75764 348 aa15.4■□□□□ 0.06
SS18-216ENST00000580751 USP1O94782 785 aa15.4■□□□□ 0.06
SS18-216ENST00000580751 PRAMEF1O95521 474 aa15.4■□□□□ 0.06
SS18-216ENST00000580751 ARRB1P49407 418 aaPredicted RBP15.4■□□□□ 0.06
SS18-216ENST00000580751 ITGA9Q13797 1035 aa15.4■□□□□ 0.06
SS18-216ENST00000580751 FZD2Q14332 565 aa15.4■□□□□ 0.06
SS18-216ENST00000580751 KYNUQ16719 465 aa15.4■□□□□ 0.06
SS18-216ENST00000580751 SKIDA1Q1XH10 827 aa15.4■□□□□ 0.06
SS18-216ENST00000580751 ZNF423Q2M1K9 1284 aa15.4■□□□□ 0.06
SS18-216ENST00000580751 HLA-BQ31612 363 aa15.4■□□□□ 0.06
SS18-216ENST00000580751 SPANXN3Q5MJ09 141 aa15.4■□□□□ 0.06
SS18-216ENST00000580751 STEAP4Q687X5 459 aa15.4■□□□□ 0.06
SS18-216ENST00000580751 FAM151BQ6UXP7 276 aa15.4■□□□□ 0.06
SS18-216ENST00000580751 TMEM135Q86UB9 458 aa15.4■□□□□ 0.06
SS18-216ENST00000580751 SPATS2Q86XZ4 545 aaKnown RBP15.4■□□□□ 0.06
SS18-216ENST00000580751 OR13C4Q8NGS5 318 aa15.4■□□□□ 0.06
SS18-216ENST00000580751 HIC2Q96JB3 615 aa15.4■□□□□ 0.06
SS18-216ENST00000580751 DNAJC1Q96KC8 554 aaKnown RBP15.4■□□□□ 0.06
SS18-216ENST00000580751 WDR92Q96MX6 357 aa15.4■□□□□ 0.06
SS18-216ENST00000580751 AGAP2Q99490 1192 aa15.4■□□□□ 0.06
SS18-216ENST00000580751 ELF4Q99607 663 aaPredicted RBP15.4■□□□□ 0.06
SS18-216ENST00000580751 TMEM109Q9BVC6 243 aa15.4■□□□□ 0.06
SS18-216ENST00000580751 ROPN1BQ9BZX4 212 aaPredicted RBP15.4■□□□□ 0.06
SS18-216ENST00000580751 ROPN1Q9HAT0 212 aaPredicted RBP15.4■□□□□ 0.06
SS18-216ENST00000580751 LRRC4CQ9HCJ2 640 aa15.4■□□□□ 0.06
SS18-216ENST00000580751 FSCN3Q9NQT6 498 aa15.4■□□□□ 0.06
SS18-216ENST00000580751 NLE1Q9NVX2 485 aaPredicted RBP15.4■□□□□ 0.06
SS18-216ENST00000580751 FKBPLQ9UIM3 349 aa15.4■□□□□ 0.06
SS18-216ENST00000580751 SOX13Q9UN79 622 aa15.4■□□□□ 0.06
SS18-216ENST00000580751 MYLKQ15746 1914 aa15.4■□□□□ 0.06
SS18-216ENST00000580751 TP53BP1Q12888 1972 aaPredicted RBP15.4■□□□□ 0.06
SS18-216ENST00000580751 FADS2P1A8MWK0 482 aa15.39■□□□□ 0.05
SS18-216ENST00000580751 H7C0S8 307 aa15.39■□□□□ 0.05
SS18-216ENST00000580751 IVLP07476 585 aa15.39■□□□□ 0.05
SS18-216ENST00000580751 PSMA3P25788 255 aa15.39■□□□□ 0.05
SS18-216ENST00000580751 MGAT1P26572 445 aa15.39■□□□□ 0.05
SS18-216ENST00000580751 STX2P32856 288 aa15.39■□□□□ 0.05
SS18-216ENST00000580751 PTPRCAPQ14761 206 aa15.39■□□□□ 0.05
SS18-216ENST00000580751 RASA2Q15283 850 aa15.39■□□□□ 0.05
SS18-216ENST00000580751 UAP1Q16222 522 aaPredicted RBP15.39■□□□□ 0.05
SS18-216ENST00000580751 TPRG1LQ5T0D9 272 aa15.39■□□□□ 0.05
SS18-216ENST00000580751 TSTD2Q5T7W7 516 aa15.39■□□□□ 0.05
SS18-216ENST00000580751 C3orf62Q6ZUJ4 267 aa15.39■□□□□ 0.05
SS18-216ENST00000580751 PHYKPLQ8IUZ5 450 aa15.39■□□□□ 0.05
SS18-216ENST00000580751 MINDY1Q8N5J2 469 aa15.39■□□□□ 0.05
SS18-216ENST00000580751 GSDMBQ8TAX9 411 aa15.39■□□□□ 0.05
SS18-216ENST00000580751 C9orf72Q96LT7 481 aa15.39■□□□□ 0.05
SS18-216ENST00000580751 VPS35Q96QK1 796 aa15.39■□□□□ 0.05
SS18-216ENST00000580751 EPB41L4BQ9H329 900 aa15.39■□□□□ 0.05
SS18-216ENST00000580751 GAREM1Q9H706 876 aa15.39■□□□□ 0.05
SS18-216ENST00000580751 TMEM9BQ9NQ34 198 aa15.39■□□□□ 0.05
SS18-216ENST00000580751 SMOXQ9NWM0 555 aa15.39■□□□□ 0.05
SS18-216ENST00000580751 SYBUQ9NX95 663 aa15.39■□□□□ 0.05
SS18-216ENST00000580751 MAD1L1Q9Y6D9 718 aa15.39■□□□□ 0.05
SS18-216ENST00000580751 CEP250Q9BV73 2442 aa15.38■□□□□ 0.05
SS18-216ENST00000580751 TNFRSF10CO14798 259 aa15.38■□□□□ 0.05
SS18-216ENST00000580751 INPP4BO15327 924 aa15.38■□□□□ 0.05
SS18-216ENST00000580751 SRP72O76094 671 aaKnown RBP15.38■□□□□ 0.05
SS18-216ENST00000580751 NME1P15531 152 aaKnown RBP15.38■□□□□ 0.05
SS18-216ENST00000580751 PAMP19021 973 aa15.38■□□□□ 0.05
SS18-216ENST00000580751 ITGALP20701 1170 aa15.38■□□□□ 0.05
SS18-216ENST00000580751 CCT8P50990 548 aa15.38■□□□□ 0.05
SS18-216ENST00000580751 CRADDP78560 199 aa15.38■□□□□ 0.05
SS18-216ENST00000580751 TMPRSS15P98073 1019 aa15.38■□□□□ 0.05
SS18-216ENST00000580751 ILF2Q12905 390 aaKnown RBP15.38■□□□□ 0.05
SS18-216ENST00000580751 NAB1Q13506 487 aa15.38■□□□□ 0.05
SS18-216ENST00000580751 SLC29A2Q14542 456 aa15.38■□□□□ 0.05
SS18-216ENST00000580751 FASTKD3Q14CZ7 662 aaKnown RBP15.38■□□□□ 0.05
SS18-216ENST00000580751 CHRNA6Q15825 494 aa15.38■□□□□ 0.05
SS18-216ENST00000580751 KLHL38Q2WGJ6 581 aa15.38■□□□□ 0.05
SS18-216ENST00000580751 CASC4Q6P4E1 433 aa15.38■□□□□ 0.05
SS18-216ENST00000580751 AGGF1Q8N302 714 aaeCLIP15.38■□□□□ 0.05
SS18-216ENST00000580751 OR56A4Q8NGH8 313 aa15.38■□□□□ 0.05
SS18-216ENST00000580751 GABPB2Q8TAK5 448 aaPredicted RBP15.38■□□□□ 0.05
SS18-216ENST00000580751 GLYATL1Q969I3 302 aa15.38■□□□□ 0.05
SS18-216ENST00000580751 COX14Q96I36 57 aa15.38■□□□□ 0.05
SS18-216ENST00000580751 WDR83Q9BRX9 315 aaKnown RBP15.38■□□□□ 0.05
SS18-216ENST00000580751 LGR4Q9BXB1 951 aa15.38■□□□□ 0.05
SS18-216ENST00000580751 ZNF446Q9NWS9 450 aa15.38■□□□□ 0.05
SS18-216ENST00000580751 MOCS1Q9NZB8 636 aa15.38■□□□□ 0.05
SS18-216ENST00000580751 KLQ9UEF7 1012 aa15.38■□□□□ 0.05
SS18-216ENST00000580751 CHMP2BQ9UQN3 213 aa15.38■□□□□ 0.05
SS18-216ENST00000580751 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.38■□□□□ 0.05
SS18-216ENST00000580751 SLC30A1Q9Y6M5 507 aa15.38■□□□□ 0.05
SS18-216ENST00000580751 FAM169AQ9Y6X4 670 aa15.38■□□□□ 0.05
SS18-216ENST00000580751 CABIN1Q9Y6J0 2220 aa15.37■□□□□ 0.05
SS18-216ENST00000580751 ADAMTS9Q9P2N4 1935 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms