RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 DNAJA1P31689 397 aaKnown RBP13.84□□□□□ -0.19
CSNK1D-213ENST00000580446 FLT3P36888 993 aa13.84□□□□□ -0.19
CSNK1D-213ENST00000580446 PBX1P40424 430 aa13.84□□□□□ -0.19
CSNK1D-213ENST00000580446 GPR1P46091 355 aa13.84□□□□□ -0.19
CSNK1D-213ENST00000580446 CSNK1G2P78368 415 aa13.84□□□□□ -0.19
CSNK1D-213ENST00000580446 C2CD6Q53TS8 623 aa13.84□□□□□ -0.19
CSNK1D-213ENST00000580446 MANEALQ5VSG8 457 aa13.84□□□□□ -0.19
CSNK1D-213ENST00000580446 FAM180AQ6UWF9 173 aa13.84□□□□□ -0.19
CSNK1D-213ENST00000580446 FAM198BQ6UWH4 519 aa13.84□□□□□ -0.19
CSNK1D-213ENST00000580446 MEX3BQ6ZN04 569 aaKnown RBP13.84□□□□□ -0.19
CSNK1D-213ENST00000580446 SPATA3Q8NHX4 192 aa13.84□□□□□ -0.19
CSNK1D-213ENST00000580446 LMO3Q8TAP4 145 aa13.84□□□□□ -0.19
CSNK1D-213ENST00000580446 DNAJB14Q8TBM8 379 aa13.84□□□□□ -0.19
CSNK1D-213ENST00000580446 SHC3Q92529 594 aa13.84□□□□□ -0.19
CSNK1D-213ENST00000580446 MTFMTQ96DP5 389 aaKnown RBP13.84□□□□□ -0.19
CSNK1D-213ENST00000580446 MAGEB10Q96LZ2 347 aaPredicted RBP13.84□□□□□ -0.19
CSNK1D-213ENST00000580446 CFAP57Q96MR6 1250 aa13.84□□□□□ -0.19
CSNK1D-213ENST00000580446 ZNF641Q96N77 438 aaPredicted RBP13.84□□□□□ -0.19
CSNK1D-213ENST00000580446 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.84□□□□□ -0.19
CSNK1D-213ENST00000580446 OR12D3Q9UGF7 316 aa13.84□□□□□ -0.19
CSNK1D-213ENST00000580446 STAP1Q9ULZ2 295 aa13.84□□□□□ -0.19
CSNK1D-213ENST00000580446 BTRCQ9Y297 605 aa13.84□□□□□ -0.19
CSNK1D-213ENST00000580446 J3KR12 359 aa13.83□□□□□ -0.2
CSNK1D-213ENST00000580446 CREB3O43889 395 aa13.83□□□□□ -0.2
CSNK1D-213ENST00000580446 LRIG2O94898 1065 aa13.83□□□□□ -0.2
CSNK1D-213ENST00000580446 CAPN1P07384 714 aa13.83□□□□□ -0.2
CSNK1D-213ENST00000580446 LHCGRP22888 699 aa13.83□□□□□ -0.2
CSNK1D-213ENST00000580446 SERPINA4P29622 427 aa13.83□□□□□ -0.2
CSNK1D-213ENST00000580446 USP8P40818 1118 aa13.83□□□□□ -0.2
CSNK1D-213ENST00000580446 UBE2IP63279 158 aaKnown RBP13.83□□□□□ -0.2
CSNK1D-213ENST00000580446 ATP11AP98196 1134 aa13.83□□□□□ -0.2
CSNK1D-213ENST00000580446 OTUD4Q01804 1114 aaKnown RBP13.83□□□□□ -0.2
CSNK1D-213ENST00000580446 PTCHD3Q3KNS1 767 aa13.83□□□□□ -0.2
CSNK1D-213ENST00000580446 PLEKHS1Q5SXH7 462 aa13.83□□□□□ -0.2
CSNK1D-213ENST00000580446 FOXD4L5Q5VV16 416 aaPredicted RBP13.83□□□□□ -0.2
CSNK1D-213ENST00000580446 GFRALQ6UXV0 394 aa13.83□□□□□ -0.2
CSNK1D-213ENST00000580446 SRLQ86TD4 932 aa13.83□□□□□ -0.2
CSNK1D-213ENST00000580446 TSPAN33Q86UF1 283 aa13.83□□□□□ -0.2
CSNK1D-213ENST00000580446 FOXD4L4Q8WXT5 416 aaPredicted RBP13.83□□□□□ -0.2
CSNK1D-213ENST00000580446 TM9SF4Q92544 642 aa13.83□□□□□ -0.2
CSNK1D-213ENST00000580446 NT5C3BQ969T7 300 aa13.83□□□□□ -0.2
CSNK1D-213ENST00000580446 SMIM14Q96QK8 99 aa13.83□□□□□ -0.2
CSNK1D-213ENST00000580446 EPB41L1Q9H4G0 881 aa13.83□□□□□ -0.2
CSNK1D-213ENST00000580446 ATP13A3Q9H7F0 1226 aa13.83□□□□□ -0.2
CSNK1D-213ENST00000580446 UBA2Q9UBT2 640 aaPredicted RBP13.83□□□□□ -0.2
CSNK1D-213ENST00000580446 CXorf51AA0A1B0GTR3 108 aa13.82□□□□□ -0.2
CSNK1D-213ENST00000580446 TRIM49BA6NDI0 452 aa13.82□□□□□ -0.2
CSNK1D-213ENST00000580446 ATMINO43313 823 aaPredicted RBP13.82□□□□□ -0.2
CSNK1D-213ENST00000580446 LDB2O43679 373 aa13.82□□□□□ -0.2
CSNK1D-213ENST00000580446 HEXIM1O94992 359 aaKnown RBP13.82□□□□□ -0.2
CSNK1D-213ENST00000580446 LCA5LO95447 670 aa13.82□□□□□ -0.2
CSNK1D-213ENST00000580446 F3P13726 295 aa13.82□□□□□ -0.2
CSNK1D-213ENST00000580446 TSFMP43897 325 aaKnown RBP13.82□□□□□ -0.2
CSNK1D-213ENST00000580446 CAPZBP47756 277 aa13.82□□□□□ -0.2
CSNK1D-213ENST00000580446 TDGF1P3P51864 188 aa13.82□□□□□ -0.2
CSNK1D-213ENST00000580446 PAK1Q13153 545 aa13.82□□□□□ -0.2
CSNK1D-213ENST00000580446 LRP8Q14114 963 aa13.82□□□□□ -0.2
CSNK1D-213ENST00000580446 SEPT7Q16181 437 aaKnown RBP13.82□□□□□ -0.2
CSNK1D-213ENST00000580446 ASIC2Q16515 512 aa13.82□□□□□ -0.2
CSNK1D-213ENST00000580446 SLC25A52Q3SY17 297 aa13.82□□□□□ -0.2
CSNK1D-213ENST00000580446 INO80DQ53TQ3 878 aaPredicted RBP13.82□□□□□ -0.2
CSNK1D-213ENST00000580446 RESP18Q5W5W9 173 aa13.82□□□□□ -0.2
CSNK1D-213ENST00000580446 GJB7Q6PEY0 223 aa13.82□□□□□ -0.2
CSNK1D-213ENST00000580446 RPTNQ6XPR3 784 aa13.82□□□□□ -0.2
CSNK1D-213ENST00000580446 TMEM26Q6ZUK4 368 aa13.82□□□□□ -0.2
CSNK1D-213ENST00000580446 CLEC1AQ8NC01 280 aa13.82□□□□□ -0.2
CSNK1D-213ENST00000580446 TSEN2Q8NCE0 465 aaKnown RBP13.82□□□□□ -0.2
CSNK1D-213ENST00000580446 SCAMP4Q969E2 229 aa13.82□□□□□ -0.2
CSNK1D-213ENST00000580446 ECHDC3Q96DC8 303 aa13.82□□□□□ -0.2
CSNK1D-213ENST00000580446 PGAP3Q96FM1 320 aaPredicted RBP13.82□□□□□ -0.2
CSNK1D-213ENST00000580446 NLNQ9BYT8 704 aa13.82□□□□□ -0.2
CSNK1D-213ENST00000580446 OSGEPL1Q9H4B0 414 aa13.82□□□□□ -0.2
CSNK1D-213ENST00000580446 CCM2LQ9NUG4 571 aaPredicted RBP13.82□□□□□ -0.2
CSNK1D-213ENST00000580446 FAM13BQ9NYF5 915 aa13.82□□□□□ -0.2
CSNK1D-213ENST00000580446 TMEM63CQ9P1W3 806 aa13.82□□□□□ -0.2
CSNK1D-213ENST00000580446 MTMR6Q9Y217 621 aa13.82□□□□□ -0.2
CSNK1D-213ENST00000580446 SIK3Q9Y2K2 1263 aa13.82□□□□□ -0.2
CSNK1D-213ENST00000580446 FAM221AA4D161 298 aa13.81□□□□□ -0.2
CSNK1D-213ENST00000580446 GOLGA8SH3BPF8 625 aa13.81□□□□□ -0.2
CSNK1D-213ENST00000580446 MEN1O00255 615 aa13.81□□□□□ -0.2
CSNK1D-213ENST00000580446 PCDH17O14917 1159 aa13.81□□□□□ -0.2
CSNK1D-213ENST00000580446 TOX3O15405 576 aaPredicted RBP13.81□□□□□ -0.2
CSNK1D-213ENST00000580446 UNC5CO95185 931 aa13.81□□□□□ -0.2
CSNK1D-213ENST00000580446 ZNF169Q14929 603 aaPredicted RBP13.81□□□□□ -0.2
CSNK1D-213ENST00000580446 CDO1Q16878 200 aa13.81□□□□□ -0.2
CSNK1D-213ENST00000580446 PLA2G4EQ3MJ16 856 aa13.81□□□□□ -0.2
CSNK1D-213ENST00000580446 ZFYVE27Q5T4F4 411 aa13.81□□□□□ -0.2
CSNK1D-213ENST00000580446 FAM102AQ5T9C2 384 aaPredicted RBP13.81□□□□□ -0.2
CSNK1D-213ENST00000580446 CATSPER1Q8NEC5 780 aa13.81□□□□□ -0.2
CSNK1D-213ENST00000580446 ZNF397Q8NF99 534 aaPredicted RBP13.81□□□□□ -0.2
CSNK1D-213ENST00000580446 SNX21Q969T3 373 aa13.81□□□□□ -0.2
CSNK1D-213ENST00000580446 ZNF514Q96K75 400 aaPredicted RBP13.81□□□□□ -0.2
CSNK1D-213ENST00000580446 GBP5Q96PP8 586 aa13.81□□□□□ -0.2
CSNK1D-213ENST00000580446 HERPUD2Q9BSE4 406 aa13.81□□□□□ -0.2
CSNK1D-213ENST00000580446 ARMCX3Q9UH62 379 aaPredicted RBP13.81□□□□□ -0.2
CSNK1D-213ENST00000580446 PCDHA7Q9UN72 937 aa13.81□□□□□ -0.2
CSNK1D-213ENST00000580446 CNTN6Q9UQ52 1028 aa13.81□□□□□ -0.2
CSNK1D-213ENST00000580446 DOCK4Q8N1I0 1966 aa13.81□□□□□ -0.2
CSNK1D-213ENST00000580446 NPIPB15A6NHN6 443 aaPredicted RBP13.8□□□□□ -0.2
CSNK1D-213ENST00000580446 DNAJC6O75061 913 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms