RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 SLC25A3Q00325 362 aa12.62□□□□□ -0.39
CDK5RAP3-217ENST00000580287 FRG1Q14331 258 aaKnown RBP12.62□□□□□ -0.39
CDK5RAP3-217ENST00000580287 ZNF234Q14588 700 aa12.62□□□□□ -0.39
CDK5RAP3-217ENST00000580287 RBBP5Q15291 538 aaKnown RBP12.62□□□□□ -0.39
CDK5RAP3-217ENST00000580287 UGP2Q16851 508 aa12.62□□□□□ -0.39
CDK5RAP3-217ENST00000580287 WASHC2DQ5SRD0 308 aa12.62□□□□□ -0.39
CDK5RAP3-217ENST00000580287 CPA6Q8N4T0 437 aa12.62□□□□□ -0.39
CDK5RAP3-217ENST00000580287 RNF217Q8TC41 542 aa12.62□□□□□ -0.39
CDK5RAP3-217ENST00000580287 ISG20Q96AZ6 181 aaKnown RBP12.62□□□□□ -0.39
CDK5RAP3-217ENST00000580287 GPR22Q99680 433 aa12.62□□□□□ -0.39
CDK5RAP3-217ENST00000580287 ETAA1Q9NY74 926 aa12.62□□□□□ -0.39
CDK5RAP3-217ENST00000580287 PACSIN3Q9UKS6 424 aa12.62□□□□□ -0.39
CDK5RAP3-217ENST00000580287 APOBEC2Q9Y235 224 aaKnown RBP12.62□□□□□ -0.39
CDK5RAP3-217ENST00000580287 NUP210Q8TEM1 1887 aaPredicted RBP12.62□□□□□ -0.39
CDK5RAP3-217ENST00000580287 A0A0J9YYE9 177 aa12.62□□□□□ -0.39
CDK5RAP3-217ENST00000580287 LOC100653049A0A140TA62 436 aa12.62□□□□□ -0.39
CDK5RAP3-217ENST00000580287 FAM95CA0A1B0GW59 222 aa12.62□□□□□ -0.39
CDK5RAP3-217ENST00000580287 CAPN14A8MX76 684 aa12.62□□□□□ -0.39
CDK5RAP3-217ENST00000580287 SMIM24O75264 130 aa12.62□□□□□ -0.39
CDK5RAP3-217ENST00000580287 KRT34O76011 436 aa12.62□□□□□ -0.39
CDK5RAP3-217ENST00000580287 KAT7O95251 611 aa12.62□□□□□ -0.39
CDK5RAP3-217ENST00000580287 TRBC1P01850 177 aa12.62□□□□□ -0.39
CDK5RAP3-217ENST00000580287 ACADSP16219 412 aa12.62□□□□□ -0.39
CDK5RAP3-217ENST00000580287 MAGEA12P43365 314 aa12.62□□□□□ -0.39
CDK5RAP3-217ENST00000580287 SLC12A2P55011 1212 aa12.62□□□□□ -0.39
CDK5RAP3-217ENST00000580287 HTR4Q13639 388 aa12.62□□□□□ -0.39
CDK5RAP3-217ENST00000580287 COL19A1Q14993 1142 aa12.62□□□□□ -0.39
CDK5RAP3-217ENST00000580287 TAF1AQ15573 450 aaPredicted RBP12.62□□□□□ -0.39
CDK5RAP3-217ENST00000580287 CCDC6Q16204 474 aa12.62□□□□□ -0.39
CDK5RAP3-217ENST00000580287 DBN1Q16643 649 aa12.62□□□□□ -0.39
CDK5RAP3-217ENST00000580287 RBM20Q5T481 1227 aaKnown RBP12.62□□□□□ -0.39
CDK5RAP3-217ENST00000580287 EGFLAMQ63HQ2 1017 aa12.62□□□□□ -0.39
CDK5RAP3-217ENST00000580287 PIANPQ8IYJ0 282 aa12.62□□□□□ -0.39
CDK5RAP3-217ENST00000580287 STK40Q8N2I9 435 aa12.62□□□□□ -0.39
CDK5RAP3-217ENST00000580287 TTC30BQ8N4P2 665 aa12.62□□□□□ -0.39
CDK5RAP3-217ENST00000580287 DNAJC9Q8WXX5 260 aa12.62□□□□□ -0.39
CDK5RAP3-217ENST00000580287 SORT1Q99523 831 aa12.62□□□□□ -0.39
CDK5RAP3-217ENST00000580287 ABCG8Q9H221 673 aa12.62□□□□□ -0.39
CDK5RAP3-217ENST00000580287 ZNF711Q9Y462 761 aa12.62□□□□□ -0.39
CDK5RAP3-217ENST00000580287 ANKRD36A6QL64 1941 aa12.61□□□□□ -0.39
CDK5RAP3-217ENST00000580287 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.61□□□□□ -0.39
CDK5RAP3-217ENST00000580287 C2orf81A6NN90 581 aa12.61□□□□□ -0.39
CDK5RAP3-217ENST00000580287 CRTAMO95727 393 aa12.61□□□□□ -0.39
CDK5RAP3-217ENST00000580287 LPOP22079 712 aaPredicted RBP12.61□□□□□ -0.39
CDK5RAP3-217ENST00000580287 IL12RB1P42701 662 aa12.61□□□□□ -0.39
CDK5RAP3-217ENST00000580287 CSNK1DP48730 415 aa12.61□□□□□ -0.39
CDK5RAP3-217ENST00000580287 GALK1P51570 392 aa12.61□□□□□ -0.39
CDK5RAP3-217ENST00000580287 ST8SIA6P61647 398 aa12.61□□□□□ -0.39
CDK5RAP3-217ENST00000580287 TSNAXIP1Q2TAA8 658 aa12.61□□□□□ -0.39
CDK5RAP3-217ENST00000580287 RALGPS1Q5JS13 557 aa12.61□□□□□ -0.39
CDK5RAP3-217ENST00000580287 CWF19L1Q69YN2 538 aaKnown RBP12.61□□□□□ -0.39
CDK5RAP3-217ENST00000580287 TMEM154Q6P9G4 183 aa12.61□□□□□ -0.39
CDK5RAP3-217ENST00000580287 GDPD4Q6W3E5 623 aa12.61□□□□□ -0.39
CDK5RAP3-217ENST00000580287 NAPRTQ6XQN6 538 aa12.61□□□□□ -0.39
CDK5RAP3-217ENST00000580287 ZNF557Q8N988 423 aaPredicted RBP12.61□□□□□ -0.39
CDK5RAP3-217ENST00000580287 STYXQ8WUJ0 223 aa12.61□□□□□ -0.39
CDK5RAP3-217ENST00000580287 ISL2Q96A47 359 aa12.61□□□□□ -0.39
CDK5RAP3-217ENST00000580287 MCMBPQ9BTE3 642 aa12.61□□□□□ -0.39
CDK5RAP3-217ENST00000580287 CEP44Q9C0F1 390 aa12.61□□□□□ -0.39
CDK5RAP3-217ENST00000580287 NMRK1Q9NWW6 199 aa12.61□□□□□ -0.39
CDK5RAP3-217ENST00000580287 G3V2L1 256 aa12.61□□□□□ -0.39
CDK5RAP3-217ENST00000580287 STX7O15400 261 aaKnown RBP12.61□□□□□ -0.39
CDK5RAP3-217ENST00000580287 TRIM13O60858 407 aa12.61□□□□□ -0.39
CDK5RAP3-217ENST00000580287 SIN3BO75182 1162 aa12.61□□□□□ -0.39
CDK5RAP3-217ENST00000580287 RPP40O75818 363 aaKnown RBP12.61□□□□□ -0.39
CDK5RAP3-217ENST00000580287 PAPSS2O95340 614 aaPredicted RBP12.61□□□□□ -0.39
CDK5RAP3-217ENST00000580287 STMN1P16949 149 aa12.61□□□□□ -0.39
CDK5RAP3-217ENST00000580287 NCF2P19878 526 aaPredicted RBP12.61□□□□□ -0.39
CDK5RAP3-217ENST00000580287 POU3F3P20264 500 aaPredicted RBP12.61□□□□□ -0.39
CDK5RAP3-217ENST00000580287 LHCGRP22888 699 aa12.61□□□□□ -0.39
CDK5RAP3-217ENST00000580287 KLC1Q07866 573 aa12.61□□□□□ -0.39
CDK5RAP3-217ENST00000580287 KRT72Q14CN4 511 aa12.61□□□□□ -0.39
CDK5RAP3-217ENST00000580287 SLC14A2Q15849 920 aa12.61□□□□□ -0.39
CDK5RAP3-217ENST00000580287 ITPRIPL2Q3MIP1 535 aa12.61□□□□□ -0.39
CDK5RAP3-217ENST00000580287 SERPINA13PQ6UXR4 307 aa12.61□□□□□ -0.39
CDK5RAP3-217ENST00000580287 CLEC14AQ86T13 490 aa12.61□□□□□ -0.39
CDK5RAP3-217ENST00000580287 CILP2Q8IUL8 1156 aa12.61□□□□□ -0.39
CDK5RAP3-217ENST00000580287 CEP97Q8IW35 865 aa12.61□□□□□ -0.39
CDK5RAP3-217ENST00000580287 ZNF781Q8N8C0 355 aa12.61□□□□□ -0.39
CDK5RAP3-217ENST00000580287 EZH1Q92800 747 aaPredicted RBP12.61□□□□□ -0.39
CDK5RAP3-217ENST00000580287 SGF29Q96ES7 293 aa12.61□□□□□ -0.39
CDK5RAP3-217ENST00000580287 CDX2Q99626 313 aaPredicted RBP12.61□□□□□ -0.39
CDK5RAP3-217ENST00000580287 HEPHQ9BQS7 1158 aa12.61□□□□□ -0.39
CDK5RAP3-217ENST00000580287 PAPOLBQ9NRJ5 636 aaKnown RBP12.61□□□□□ -0.39
CDK5RAP3-217ENST00000580287 HEBP1Q9NRV9 189 aa12.61□□□□□ -0.39
CDK5RAP3-217ENST00000580287 G3BP2Q9UN86 482 aaKnown RBP12.61□□□□□ -0.39
CDK5RAP3-217ENST00000580287 ACOT9Q9Y305 439 aa12.61□□□□□ -0.39
CDK5RAP3-217ENST00000580287 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.6□□□□□ -0.39
CDK5RAP3-217ENST00000580287 CD3EAPO15446 510 aaKnown RBP12.6□□□□□ -0.39
CDK5RAP3-217ENST00000580287 ECI2O75521 394 aa12.6□□□□□ -0.39
CDK5RAP3-217ENST00000580287 SLC35E2BP0CK96 405 aa12.6□□□□□ -0.39
CDK5RAP3-217ENST00000580287 HADHAP40939 763 aa12.6□□□□□ -0.39
CDK5RAP3-217ENST00000580287 GRIA4P48058 902 aa12.6□□□□□ -0.39
CDK5RAP3-217ENST00000580287 CD151P48509 253 aa12.6□□□□□ -0.39
CDK5RAP3-217ENST00000580287 CDKN3Q16667 212 aa12.6□□□□□ -0.39
CDK5RAP3-217ENST00000580287 PSAPL1Q6NUJ1 521 aa12.6□□□□□ -0.39
CDK5RAP3-217ENST00000580287 CRTC1Q6UUV9 634 aa12.6□□□□□ -0.39
CDK5RAP3-217ENST00000580287 FAM151BQ6UXP7 276 aa12.6□□□□□ -0.39
CDK5RAP3-217ENST00000580287 METTL3Q86U44 580 aaKnown RBP12.6□□□□□ -0.39
CDK5RAP3-217ENST00000580287 C2CD4AQ8NCU7 369 aaPredicted RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms