RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 VPS35Q96QK1 796 aa21.98■■□□□ 1.11
SMARCD2-206ENST00000577990 ARFGAP3Q9NP61 516 aa21.98■■□□□ 1.11
SMARCD2-206ENST00000577990 RAB6BQ9NRW1 208 aa21.98■■□□□ 1.11
SMARCD2-206ENST00000577990 SIRPGQ9P1W8 387 aa21.98■■□□□ 1.11
SMARCD2-206ENST00000577990 GULP1Q9UBP9 304 aa21.98■■□□□ 1.11
SMARCD2-206ENST00000577990 RALYQ9UKM9 306 aaKnown RBP21.98■■□□□ 1.11
SMARCD2-206ENST00000577990 SNX12Q9UMY4 172 aa21.98■■□□□ 1.11
SMARCD2-206ENST00000577990 GLYATL1P3A0A0U1RQE8 302 aa21.97■■□□□ 1.11
SMARCD2-206ENST00000577990 E7EVH7 732 aa21.97■■□□□ 1.11
SMARCD2-206ENST00000577990 PGRMC1O00264 195 aaKnown RBP21.97■■□□□ 1.11
SMARCD2-206ENST00000577990 DNAJC6O75061 913 aa21.97■■□□□ 1.11
SMARCD2-206ENST00000577990 ZSCAN5DPP0CG00 497 aa21.97■■□□□ 1.11
SMARCD2-206ENST00000577990 RPL22P35268 128 aaKnown RBP21.97■■□□□ 1.11
SMARCD2-206ENST00000577990 LMAN1P49257 510 aa21.97■■□□□ 1.11
SMARCD2-206ENST00000577990 PDE1BQ01064 536 aa21.97■■□□□ 1.11
SMARCD2-206ENST00000577990 CTBSQ01459 385 aa21.97■■□□□ 1.11
SMARCD2-206ENST00000577990 SEMA5AQ13591 1074 aa21.97■■□□□ 1.11
SMARCD2-206ENST00000577990 PTPRCAPQ14761 206 aa21.97■■□□□ 1.11
SMARCD2-206ENST00000577990 ATP13A5Q4VNC0 1218 aa21.97■■□□□ 1.11
SMARCD2-206ENST00000577990 GUSBP11Q6P575 273 aa21.97■■□□□ 1.11
SMARCD2-206ENST00000577990 FAM151BQ6UXP7 276 aa21.97■■□□□ 1.11
SMARCD2-206ENST00000577990 LINC00523Q86TU6 105 aa21.97■■□□□ 1.11
SMARCD2-206ENST00000577990 NRROSQ86YC3 692 aa21.97■■□□□ 1.11
SMARCD2-206ENST00000577990 FAM46DQ8NEK8 389 aa21.97■■□□□ 1.11
SMARCD2-206ENST00000577990 IFI44Q8TCB0 444 aa21.97■■□□□ 1.11
SMARCD2-206ENST00000577990 RMI1Q9H9A7 625 aa21.97■■□□□ 1.11
SMARCD2-206ENST00000577990 TRIM39Q9HCM9 518 aa21.97■■□□□ 1.11
SMARCD2-206ENST00000577990 ATXN10Q9UBB4 475 aa21.97■■□□□ 1.11
SMARCD2-206ENST00000577990 KCTD3Q9Y597 815 aa21.97■■□□□ 1.11
SMARCD2-206ENST00000577990 ITPR1Q14643 2758 aa21.97■■□□□ 1.11
SMARCD2-206ENST00000577990 ZNF106Q9H2Y7 1883 aaKnown RBP21.96■■□□□ 1.11
SMARCD2-206ENST00000577990 MYLKQ15746 1914 aa21.96■■□□□ 1.11
SMARCD2-206ENST00000577990 ARHGEF17Q96PE2 2063 aaPredicted RBP21.96■■□□□ 1.11
SMARCD2-206ENST00000577990 CPED1A4D0V7 1026 aa21.96■■□□□ 1.11
SMARCD2-206ENST00000577990 EME2A4GXA9 379 aaPredicted RBP21.96■■□□□ 1.11
SMARCD2-206ENST00000577990 FAM149AA5PLN7 773 aa21.96■■□□□ 1.11
SMARCD2-206ENST00000577990 SRRM3A6NNA2 597 aaPredicted RBP21.96■■□□□ 1.11
SMARCD2-206ENST00000577990 CES2O00748 559 aa21.96■■□□□ 1.11
SMARCD2-206ENST00000577990 GP1BAP07359 652 aa21.96■■□□□ 1.11
SMARCD2-206ENST00000577990 AK4P27144 223 aaPredicted RBP21.96■■□□□ 1.11
SMARCD2-206ENST00000577990 ZNF140P52738 457 aaPredicted RBP21.96■■□□□ 1.11
SMARCD2-206ENST00000577990 GNG11P61952 73 aa21.96■■□□□ 1.11
SMARCD2-206ENST00000577990 E2F1Q01094 437 aa21.96■■□□□ 1.11
SMARCD2-206ENST00000577990 SMAD1Q15797 465 aaKnown RBP21.96■■□□□ 1.11
SMARCD2-206ENST00000577990 CHRNA6Q15825 494 aa21.96■■□□□ 1.11
SMARCD2-206ENST00000577990 ZNF648Q5T619 568 aaPredicted RBP21.96■■□□□ 1.11
SMARCD2-206ENST00000577990 C4orf22Q6V702 233 aa21.96■■□□□ 1.11
SMARCD2-206ENST00000577990 TMPRSS7Q7RTY8 843 aa21.96■■□□□ 1.11
SMARCD2-206ENST00000577990 EFL1Q7Z2Z2 1120 aaKnown RBP21.96■■□□□ 1.11
SMARCD2-206ENST00000577990 GALNT15Q8N3T1 639 aa21.96■■□□□ 1.11
SMARCD2-206ENST00000577990 OR4K2Q8NGD2 314 aa21.96■■□□□ 1.11
SMARCD2-206ENST00000577990 ACTRT1Q8TDG2 376 aa21.96■■□□□ 1.11
SMARCD2-206ENST00000577990 OR2AG1Q9H205 316 aa21.96■■□□□ 1.11
SMARCD2-206ENST00000577990 ZNHIT2Q9UHR6 403 aa21.96■■□□□ 1.11
SMARCD2-206ENST00000577990 TMPRSS11EQ9UL52 423 aa21.96■■□□□ 1.11
SMARCD2-206ENST00000577990 PADI4Q9UM07 663 aa21.96■■□□□ 1.11
SMARCD2-206ENST00000577990 PCYT1BQ9Y5K3 369 aaPredicted RBP21.96■■□□□ 1.11
SMARCD2-206ENST00000577990 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.96■■□□□ 1.11
SMARCD2-206ENST00000577990 NBEAQ8NFP9 2946 aa21.95■■□□□ 1.1
SMARCD2-206ENST00000577990 B4DGG1 531 aa21.95■■□□□ 1.1
SMARCD2-206ENST00000577990 GPR89AB7ZAQ6 455 aa21.95■■□□□ 1.1
SMARCD2-206ENST00000577990 GAPDHSO14556 408 aaPredicted RBP21.95■■□□□ 1.1
SMARCD2-206ENST00000577990 NUAK1O60285 661 aa21.95■■□□□ 1.1
SMARCD2-206ENST00000577990 SUN1O94901 812 aa21.95■■□□□ 1.1
SMARCD2-206ENST00000577990 GPR89BP0CG08 455 aa21.95■■□□□ 1.1
SMARCD2-206ENST00000577990 TPH1P17752 444 aa21.95■■□□□ 1.1
SMARCD2-206ENST00000577990 ITGA9Q13797 1035 aa21.95■■□□□ 1.1
SMARCD2-206ENST00000577990 LRP8Q14114 963 aa21.95■■□□□ 1.1
SMARCD2-206ENST00000577990 OGFOD3Q6PK18 319 aa21.95■■□□□ 1.1
SMARCD2-206ENST00000577990 SLC30A9Q6PML9 568 aa21.95■■□□□ 1.1
SMARCD2-206ENST00000577990 ADGRG6Q86SQ4 1221 aa21.95■■□□□ 1.1
SMARCD2-206ENST00000577990 GPR156Q8NFN8 814 aa21.95■■□□□ 1.1
SMARCD2-206ENST00000577990 NAT6Q93015 286 aa21.95■■□□□ 1.1
SMARCD2-206ENST00000577990 C19orf43Q9BQ61 176 aa21.95■■□□□ 1.1
SMARCD2-206ENST00000577990 AP1M1Q9BXS5 423 aa21.95■■□□□ 1.1
SMARCD2-206ENST00000577990 DPEP2Q9H4A9 486 aa21.95■■□□□ 1.1
SMARCD2-206ENST00000577990 PIH1D1Q9NWS0 290 aaKnown RBP21.95■■□□□ 1.1
SMARCD2-206ENST00000577990 SMARCAL1Q9NZC9 954 aa21.95■■□□□ 1.1
SMARCD2-206ENST00000577990 TAAR2Q9P1P5 351 aa21.95■■□□□ 1.1
SMARCD2-206ENST00000577990 FKBPLQ9UIM3 349 aa21.95■■□□□ 1.1
SMARCD2-206ENST00000577990 PLEKHM1Q9Y4G2 1056 aa21.95■■□□□ 1.1
SMARCD2-206ENST00000577990 ST14Q9Y5Y6 855 aa21.95■■□□□ 1.1
SMARCD2-206ENST00000577990 ASXL3Q9C0F0 2248 aa21.95■■□□□ 1.1
SMARCD2-206ENST00000577990 LDB2O43679 373 aa21.94■■□□□ 1.1
SMARCD2-206ENST00000577990 PRAMEF1O95521 474 aa21.94■■□□□ 1.1
SMARCD2-206ENST00000577990 CAPNS1P04632 268 aa21.94■■□□□ 1.1
SMARCD2-206ENST00000577990 ZNF8P17098 575 aaPredicted RBP21.94■■□□□ 1.1
SMARCD2-206ENST00000577990 TCP1P17987 556 aaKnown RBP21.94■■□□□ 1.1
SMARCD2-206ENST00000577990 ACTR1BP42025 376 aa21.94■■□□□ 1.1
SMARCD2-206ENST00000577990 CLDN6P56747 220 aa21.94■■□□□ 1.1
SMARCD2-206ENST00000577990 ACTR1AP61163 376 aa21.94■■□□□ 1.1
SMARCD2-206ENST00000577990 CDH17Q12864 832 aa21.94■■□□□ 1.1
SMARCD2-206ENST00000577990 PEX6Q13608 980 aa21.94■■□□□ 1.1
SMARCD2-206ENST00000577990 PPP1R21Q6ZMI0 780 aa21.94■■□□□ 1.1
SMARCD2-206ENST00000577990 TMPRSS12Q86WS5 348 aa21.94■■□□□ 1.1
SMARCD2-206ENST00000577990 OR52K1Q8NGK4 314 aa21.94■■□□□ 1.1
SMARCD2-206ENST00000577990 OR13C4Q8NGS5 318 aa21.94■■□□□ 1.1
SMARCD2-206ENST00000577990 GDAP1Q8TB36 358 aa21.94■■□□□ 1.1
SMARCD2-206ENST00000577990 MAGOHBQ96A72 148 aaKnown RBP21.94■■□□□ 1.1
SMARCD2-206ENST00000577990 SPATS2LQ9NUQ6 558 aaKnown RBP21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms