RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 ILF2Q12905 390 aaKnown RBP11.07□□□□□ -0.64
CDK5RAP3-204ENST00000577664 FGL2Q14314 439 aa11.07□□□□□ -0.64
CDK5RAP3-204ENST00000577664 LONRF1Q17RB8 773 aa11.07□□□□□ -0.64
CDK5RAP3-204ENST00000577664 LRRC73Q5JTD7 316 aa11.07□□□□□ -0.64
CDK5RAP3-204ENST00000577664 PMS2CLQ68D20 193 aa11.07□□□□□ -0.64
CDK5RAP3-204ENST00000577664 TBC1D3GQ6DHY5 549 aa11.07□□□□□ -0.64
CDK5RAP3-204ENST00000577664 TBC1D3CQ6IPX1 549 aa11.07□□□□□ -0.64
CDK5RAP3-204ENST00000577664 CASC4Q6P4E1 433 aa11.07□□□□□ -0.64
CDK5RAP3-204ENST00000577664 Q6ZVL8 140 aa11.07□□□□□ -0.64
CDK5RAP3-204ENST00000577664 TBC1D3Q8IZP1 549 aaPredicted RBP11.07□□□□□ -0.64
CDK5RAP3-204ENST00000577664 TRAM1L1Q8N609 369 aa11.07□□□□□ -0.64
CDK5RAP3-204ENST00000577664 PAF1Q8N7H5 531 aa11.07□□□□□ -0.64
CDK5RAP3-204ENST00000577664 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.07□□□□□ -0.64
CDK5RAP3-204ENST00000577664 DENND6BQ8NEG7 585 aa11.07□□□□□ -0.64
CDK5RAP3-204ENST00000577664 OR13C4Q8NGS5 318 aa11.07□□□□□ -0.64
CDK5RAP3-204ENST00000577664 FAM174AQ8TBP5 190 aa11.07□□□□□ -0.64
CDK5RAP3-204ENST00000577664 GANCQ8TET4 914 aa11.07□□□□□ -0.64
CDK5RAP3-204ENST00000577664 HDAC10Q969S8 669 aa11.07□□□□□ -0.64
CDK5RAP3-204ENST00000577664 ERLEC1Q96DZ1 483 aa11.07□□□□□ -0.64
CDK5RAP3-204ENST00000577664 DNAJC1Q96KC8 554 aaKnown RBP11.07□□□□□ -0.64
CDK5RAP3-204ENST00000577664 C9orf72Q96LT7 481 aa11.07□□□□□ -0.64
CDK5RAP3-204ENST00000577664 TBATAQ96M53 351 aa11.07□□□□□ -0.64
CDK5RAP3-204ENST00000577664 VPS35Q96QK1 796 aa11.07□□□□□ -0.64
CDK5RAP3-204ENST00000577664 TCF12Q99081 682 aa11.07□□□□□ -0.64
CDK5RAP3-204ENST00000577664 KLF6Q99612 283 aaPredicted RBP11.07□□□□□ -0.64
CDK5RAP3-204ENST00000577664 ZSCAN5AQ9BUG6 496 aa11.07□□□□□ -0.64
CDK5RAP3-204ENST00000577664 ABCG8Q9H221 673 aa11.07□□□□□ -0.64
CDK5RAP3-204ENST00000577664 FAM83DQ9H4H8 585 aa11.07□□□□□ -0.64
CDK5RAP3-204ENST00000577664 PRORYQ9H606 182 aa11.07□□□□□ -0.64
CDK5RAP3-204ENST00000577664 SMOXQ9NWM0 555 aa11.07□□□□□ -0.64
CDK5RAP3-204ENST00000577664 SLC2A6Q9UGQ3 507 aa11.07□□□□□ -0.64
CDK5RAP3-204ENST00000577664 MBD1Q9UIS9 605 aaPredicted RBP11.07□□□□□ -0.64
CDK5RAP3-204ENST00000577664 CHMP2BQ9UQN3 213 aa11.07□□□□□ -0.64
CDK5RAP3-204ENST00000577664 DMTF1Q9Y222 760 aa11.07□□□□□ -0.64
CDK5RAP3-204ENST00000577664 HS3ST3A1Q9Y663 406 aa11.07□□□□□ -0.64
CDK5RAP3-204ENST00000577664 PTPRQQ9UMZ3 2332 aa11.07□□□□□ -0.64
CDK5RAP3-204ENST00000577664 SCN8AQ9UQD0 1980 aa11.07□□□□□ -0.64
CDK5RAP3-204ENST00000577664 ZNF106Q9H2Y7 1883 aaKnown RBP11.06□□□□□ -0.64
CDK5RAP3-204ENST00000577664 TRPM6Q9BX84 2022 aa11.06□□□□□ -0.64
CDK5RAP3-204ENST00000577664 SPTAN1Q13813 2472 aaKnown RBP11.06□□□□□ -0.64
CDK5RAP3-204ENST00000577664 A0A0U1RQS6 177 aa11.06□□□□□ -0.64
CDK5RAP3-204ENST00000577664 A0A1W2PQU0 124 aa11.06□□□□□ -0.64
CDK5RAP3-204ENST00000577664 TCRBV9S1A1TA0A576 114 aa11.06□□□□□ -0.64
CDK5RAP3-204ENST00000577664 FAM159BA6NKW6 160 aa11.06□□□□□ -0.64
CDK5RAP3-204ENST00000577664 A8MX80 341 aa11.06□□□□□ -0.64
CDK5RAP3-204ENST00000577664 TCEA3O75764 348 aa11.06□□□□□ -0.64
CDK5RAP3-204ENST00000577664 SRP72O76094 671 aaKnown RBP11.06□□□□□ -0.64
CDK5RAP3-204ENST00000577664 PCDH8O95206 1070 aa11.06□□□□□ -0.64
CDK5RAP3-204ENST00000577664 SOD1P00441 154 aa11.06□□□□□ -0.64
CDK5RAP3-204ENST00000577664 IGHV4-34P06331 123 aa11.06□□□□□ -0.64
CDK5RAP3-204ENST00000577664 SSTR1P30872 391 aa11.06□□□□□ -0.64
CDK5RAP3-204ENST00000577664 PHBP35232 272 aa11.06□□□□□ -0.64
CDK5RAP3-204ENST00000577664 SPAM1P38567 509 aa11.06□□□□□ -0.64
CDK5RAP3-204ENST00000577664 ETV3P41162 512 aa11.06□□□□□ -0.64
CDK5RAP3-204ENST00000577664 ADARP55265 1226 aaKnown RBP11.06□□□□□ -0.64
CDK5RAP3-204ENST00000577664 MTM1Q13496 603 aa11.06□□□□□ -0.64
CDK5RAP3-204ENST00000577664 ITGA9Q13797 1035 aa11.06□□□□□ -0.64
CDK5RAP3-204ENST00000577664 PTPRCAPQ14761 206 aa11.06□□□□□ -0.64
CDK5RAP3-204ENST00000577664 RASA2Q15283 850 aa11.06□□□□□ -0.64
CDK5RAP3-204ENST00000577664 TEDDM1Q5T9Z0 273 aa11.06□□□□□ -0.64
CDK5RAP3-204ENST00000577664 DENND2CQ68D51 928 aa11.06□□□□□ -0.64
CDK5RAP3-204ENST00000577664 KIAA0895LQ68EN5 471 aa11.06□□□□□ -0.64
CDK5RAP3-204ENST00000577664 CERS6Q6ZMG9 384 aa11.06□□□□□ -0.64
CDK5RAP3-204ENST00000577664 KIAA0408Q6ZU52 694 aa11.06□□□□□ -0.64
CDK5RAP3-204ENST00000577664 SNX20Q7Z614 316 aa11.06□□□□□ -0.64
CDK5RAP3-204ENST00000577664 CCDC25Q86WR0 208 aa11.06□□□□□ -0.64
CDK5RAP3-204ENST00000577664 ANKMY2Q8IV38 441 aa11.06□□□□□ -0.64
CDK5RAP3-204ENST00000577664 IQCKQ8N0W5 287 aa11.06□□□□□ -0.64
CDK5RAP3-204ENST00000577664 TP53I13Q8NBR0 393 aaPredicted RBP11.06□□□□□ -0.64
CDK5RAP3-204ENST00000577664 OR4L1Q8NH43 312 aa11.06□□□□□ -0.64
CDK5RAP3-204ENST00000577664 CALML6Q8TD86 181 aa11.06□□□□□ -0.64
CDK5RAP3-204ENST00000577664 DNASE2BQ8WZ79 361 aa11.06□□□□□ -0.64
CDK5RAP3-204ENST00000577664 CERS2Q96G23 380 aa11.06□□□□□ -0.64
CDK5RAP3-204ENST00000577664 ORAI3Q9BRQ5 295 aa11.06□□□□□ -0.64
CDK5RAP3-204ENST00000577664 TRIM56Q9BRZ2 755 aaKnown RBP11.06□□□□□ -0.64
CDK5RAP3-204ENST00000577664 MCMBPQ9BTE3 642 aa11.06□□□□□ -0.64
CDK5RAP3-204ENST00000577664 WRAP53Q9BUR4 548 aaKnown RBP11.06□□□□□ -0.64
CDK5RAP3-204ENST00000577664 C1QTNF7Q9BXJ2 289 aa11.06□□□□□ -0.64
CDK5RAP3-204ENST00000577664 TPSD1Q9BZJ3 242 aa11.06□□□□□ -0.64
CDK5RAP3-204ENST00000577664 RABGEF1Q9UJ41 708 aa11.06□□□□□ -0.64
CDK5RAP3-204ENST00000577664 CYP8B1Q9UNU6 501 aa11.06□□□□□ -0.64
CDK5RAP3-204ENST00000577664 ABCA7Q8IZY2 2146 aa11.06□□□□□ -0.64
CDK5RAP3-204ENST00000577664 LRRK1Q38SD2 2015 aa11.06□□□□□ -0.64
CDK5RAP3-204ENST00000577664 MYLKQ15746 1914 aa11.05□□□□□ -0.64
CDK5RAP3-204ENST00000577664 IGLV3-16A0A075B6K0 115 aa11.05□□□□□ -0.64
CDK5RAP3-204ENST00000577664 GLYATL1P3A0A0U1RQE8 302 aa11.05□□□□□ -0.64
CDK5RAP3-204ENST00000577664 A0A1W2PPC4 97 aa11.05□□□□□ -0.64
CDK5RAP3-204ENST00000577664 CCDC162PA2VCL2 907 aa11.05□□□□□ -0.64
CDK5RAP3-204ENST00000577664 LZTS3O60299 673 aaPredicted RBP11.05□□□□□ -0.64
CDK5RAP3-204ENST00000577664 VAPBO95292 243 aa11.05□□□□□ -0.64
CDK5RAP3-204ENST00000577664 PAK4O96013 591 aaPredicted RBP11.05□□□□□ -0.64
CDK5RAP3-204ENST00000577664 GOT2P00505 430 aaKnown RBP11.05□□□□□ -0.64
CDK5RAP3-204ENST00000577664 NUDT17P0C025 328 aa11.05□□□□□ -0.64
CDK5RAP3-204ENST00000577664 FOXN2P32314 431 aa11.05□□□□□ -0.64
CDK5RAP3-204ENST00000577664 STX2P32856 288 aa11.05□□□□□ -0.64
CDK5RAP3-204ENST00000577664 ABCG1P45844 678 aa11.05□□□□□ -0.64
CDK5RAP3-204ENST00000577664 PRAMEP78395 509 aa11.05□□□□□ -0.64
CDK5RAP3-204ENST00000577664 SEMG2Q02383 582 aa11.05□□□□□ -0.64
CDK5RAP3-204ENST00000577664 CFHR1Q03591 330 aa11.05□□□□□ -0.64
CDK5RAP3-204ENST00000577664 CACNG1Q06432 222 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms