RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 CNPY3Q9BT09 278 aa6.26□□□□□ -1.41
NUP88-212ENST00000576708 SLC39A8Q9C0K1 460 aa6.26□□□□□ -1.41
NUP88-212ENST00000576708 DHX35Q9H5Z1 703 aaKnown RBP6.26□□□□□ -1.41
NUP88-212ENST00000576708 LRRC19Q9H756 370 aa6.26□□□□□ -1.41
NUP88-212ENST00000576708 POLR1BQ9H9Y6 1135 aa6.26□□□□□ -1.41
NUP88-212ENST00000576708 PDFQ9HBH1 243 aa6.26□□□□□ -1.41
NUP88-212ENST00000576708 PCDH12Q9NPG4 1184 aa6.26□□□□□ -1.41
NUP88-212ENST00000576708 ASCL3Q9NQ33 180 aa6.26□□□□□ -1.41
NUP88-212ENST00000576708 SPASTQ9UBP0 616 aa6.26□□□□□ -1.41
NUP88-212ENST00000576708 GULP1Q9UBP9 304 aa6.26□□□□□ -1.41
NUP88-212ENST00000576708 UBA2Q9UBT2 640 aaPredicted RBP6.26□□□□□ -1.41
NUP88-212ENST00000576708 PCSK1NQ9UHG2 260 aa6.26□□□□□ -1.41
NUP88-212ENST00000576708 MFHAS1Q9Y4C4 1052 aa6.26□□□□□ -1.41
NUP88-212ENST00000576708 DAAM1Q9Y4D1 1078 aa6.26□□□□□ -1.41
NUP88-212ENST00000576708 OR1A2Q9Y585 309 aa6.26□□□□□ -1.41
NUP88-212ENST00000576708 ENTPD2Q9Y5L3 495 aa6.26□□□□□ -1.41
NUP88-212ENST00000576708 CSNK1G3Q9Y6M4 447 aa6.26□□□□□ -1.41
NUP88-212ENST00000576708 CXorf51AA0A1B0GTR3 108 aa6.25□□□□□ -1.41
NUP88-212ENST00000576708 LMO7DNF2Z398 122 aa6.25□□□□□ -1.41
NUP88-212ENST00000576708 TPP1O14773 563 aa6.25□□□□□ -1.41
NUP88-212ENST00000576708 KLK10O43240 276 aa6.25□□□□□ -1.41
NUP88-212ENST00000576708 PRAMEF11O60813 436 aa6.25□□□□□ -1.41
NUP88-212ENST00000576708 PCCBP05166 539 aa6.25□□□□□ -1.41
NUP88-212ENST00000576708 PTMAP06454 111 aaKnown RBP6.25□□□□□ -1.41
NUP88-212ENST00000576708 ANXA6P08133 673 aa6.25□□□□□ -1.41
NUP88-212ENST00000576708 C6P13671 934 aa6.25□□□□□ -1.41
NUP88-212ENST00000576708 TNFAIP3P21580 790 aa6.25□□□□□ -1.41
NUP88-212ENST00000576708 XPAP23025 273 aaPredicted RBP6.25□□□□□ -1.41
NUP88-212ENST00000576708 PSMA2P25787 234 aa6.25□□□□□ -1.41
NUP88-212ENST00000576708 PDX1P52945 283 aa6.25□□□□□ -1.41
NUP88-212ENST00000576708 YBEYP58557 167 aaPredicted RBP6.25□□□□□ -1.41
NUP88-212ENST00000576708 TPI1P60174 286 aa6.25□□□□□ -1.41
NUP88-212ENST00000576708 YPEL5P62699 121 aa6.25□□□□□ -1.41
NUP88-212ENST00000576708 PPARDQ03181 441 aa6.25□□□□□ -1.41
NUP88-212ENST00000576708 MAMLD1Q13495 774 aa6.25□□□□□ -1.41
NUP88-212ENST00000576708 PTK2BQ14289 1009 aa6.25□□□□□ -1.41
NUP88-212ENST00000576708 PTPRRQ15256 657 aa6.25□□□□□ -1.41
NUP88-212ENST00000576708 SF1Q15637 639 aaKnown RBP6.25□□□□□ -1.41
NUP88-212ENST00000576708 UGP2Q16851 508 aa6.25□□□□□ -1.41
NUP88-212ENST00000576708 PARP15Q460N3 678 aa6.25□□□□□ -1.41
NUP88-212ENST00000576708 INO80DQ53TQ3 878 aaPredicted RBP6.25□□□□□ -1.41
NUP88-212ENST00000576708 ARHGAP40Q5TG30 622 aa6.25□□□□□ -1.41
NUP88-212ENST00000576708 E4F1Q66K89 784 aaPredicted RBP6.25□□□□□ -1.41
NUP88-212ENST00000576708 GTF2IRD2BQ6EKJ0 949 aa6.25□□□□□ -1.41
NUP88-212ENST00000576708 SASS6Q6UVJ0 657 aa6.25□□□□□ -1.41
NUP88-212ENST00000576708 MACC1Q6ZN28 852 aa6.25□□□□□ -1.41
NUP88-212ENST00000576708 CLEC17AQ6ZS10 378 aa6.25□□□□□ -1.41
NUP88-212ENST00000576708 B3GNT8Q7Z7M8 397 aa6.25□□□□□ -1.41
NUP88-212ENST00000576708 SRLQ86TD4 932 aa6.25□□□□□ -1.41
NUP88-212ENST00000576708 GTF2IRD2Q86UP8 949 aa6.25□□□□□ -1.41
NUP88-212ENST00000576708 ARHGAP12Q8IWW6 846 aa6.25□□□□□ -1.41
NUP88-212ENST00000576708 PELI3Q8N2H9 469 aa6.25□□□□□ -1.41
NUP88-212ENST00000576708 AOPEPQ8N6M6 819 aa6.25□□□□□ -1.41
NUP88-212ENST00000576708 NPWQ8N729 165 aa6.25□□□□□ -1.41
NUP88-212ENST00000576708 KYQ8NBH2 561 aa6.25□□□□□ -1.41
NUP88-212ENST00000576708 ZNF248Q8NDW4 579 aa6.25□□□□□ -1.41
NUP88-212ENST00000576708 PCDH19Q8TAB3 1148 aa6.25□□□□□ -1.41
NUP88-212ENST00000576708 BTN2A2Q8WVV5 523 aa6.25□□□□□ -1.41
NUP88-212ENST00000576708 CASKIN2Q8WXE0 1202 aa6.25□□□□□ -1.41
NUP88-212ENST00000576708 ARHGEF26Q96DR7 871 aa6.25□□□□□ -1.41
NUP88-212ENST00000576708 ZNF578Q96N58 590 aaPredicted RBP6.25□□□□□ -1.41
NUP88-212ENST00000576708 ERGIC2Q96RQ1 377 aa6.25□□□□□ -1.41
NUP88-212ENST00000576708 NCAPGQ9BPX3 1015 aa6.25□□□□□ -1.41
NUP88-212ENST00000576708 CCDC3Q9BQI4 270 aa6.25□□□□□ -1.41
NUP88-212ENST00000576708 SYT11Q9BT88 431 aa6.25□□□□□ -1.41
NUP88-212ENST00000576708 ANP32EQ9BTT0 268 aa6.25□□□□□ -1.41
NUP88-212ENST00000576708 APOOQ9BUR5 198 aa6.25□□□□□ -1.41
NUP88-212ENST00000576708 SNRNP25Q9BV90 132 aaKnown RBP6.25□□□□□ -1.41
NUP88-212ENST00000576708 BOCQ9BWV1 1114 aa6.25□□□□□ -1.41
NUP88-212ENST00000576708 SLC13A1Q9BZW2 595 aa6.25□□□□□ -1.41
NUP88-212ENST00000576708 RETREG1Q9H6L5 497 aa6.25□□□□□ -1.41
NUP88-212ENST00000576708 CATSPERBQ9H7T0 1116 aa6.25□□□□□ -1.41
NUP88-212ENST00000576708 USP29Q9HBJ7 922 aa6.25□□□□□ -1.41
NUP88-212ENST00000576708 MRPL40Q9NQ50 206 aaKnown RBP6.25□□□□□ -1.41
NUP88-212ENST00000576708 C19orf73Q9NVV2 129 aa6.25□□□□□ -1.41
NUP88-212ENST00000576708 ANO10Q9NW15 660 aa6.25□□□□□ -1.41
NUP88-212ENST00000576708 DKK3Q9UBP4 350 aa6.25□□□□□ -1.41
NUP88-212ENST00000576708 PADI4Q9UM07 663 aa6.25□□□□□ -1.41
NUP88-212ENST00000576708 CHD5Q8TDI0 1954 aa6.25□□□□□ -1.41
NUP88-212ENST00000576708 SHROOM3Q8TF72 1996 aa6.24□□□□□ -1.41
NUP88-212ENST00000576708 SMG1Q96Q15 3661 aaKnown RBP6.24□□□□□ -1.41
NUP88-212ENST00000576708 TSPAN11A1L157 253 aa6.24□□□□□ -1.41
NUP88-212ENST00000576708 TMEM202A6NGA9 273 aa6.24□□□□□ -1.41
NUP88-212ENST00000576708 TMEM191CA6NGB0 347 aa6.24□□□□□ -1.41
NUP88-212ENST00000576708 LRRC10BA6NIK2 292 aa6.24□□□□□ -1.41
NUP88-212ENST00000576708 LRRC53A6NM62 1247 aa6.24□□□□□ -1.41
NUP88-212ENST00000576708 DFFAO00273 331 aa6.24□□□□□ -1.41
NUP88-212ENST00000576708 EEF2KO00418 725 aaKnown RBP6.24□□□□□ -1.41
NUP88-212ENST00000576708 FGF10O15520 208 aaPredicted RBP6.24□□□□□ -1.41
NUP88-212ENST00000576708 TNFSF15O95150 251 aa6.24□□□□□ -1.41
NUP88-212ENST00000576708 RASGRP1O95267 797 aa6.24□□□□□ -1.41
NUP88-212ENST00000576708 ZGLP1P0C6A0 271 aa6.24□□□□□ -1.41
NUP88-212ENST00000576708 SKILP12757 684 aa6.24□□□□□ -1.41
NUP88-212ENST00000576708 CTSEP14091 401 aa6.24□□□□□ -1.41
NUP88-212ENST00000576708 HGFP14210 728 aa6.24□□□□□ -1.41
NUP88-212ENST00000576708 TCF4P15884 667 aa6.24□□□□□ -1.41
NUP88-212ENST00000576708 FERP16591 822 aa6.24□□□□□ -1.41
NUP88-212ENST00000576708 GM2AP17900 193 aa6.24□□□□□ -1.41
NUP88-212ENST00000576708 ERCC2P18074 760 aa6.24□□□□□ -1.41
NUP88-212ENST00000576708 MIPP30301 263 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms