RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 GAD1Q99259 594 aa9.53□□□□□ -0.88
CCDC40-212ENST00000574799 BBS2Q9BXC9 721 aa9.53□□□□□ -0.88
CCDC40-212ENST00000574799 RHOBTB2Q9BYZ6 727 aa9.53□□□□□ -0.88
CCDC40-212ENST00000574799 NUAK2Q9H093 628 aa9.53□□□□□ -0.88
CCDC40-212ENST00000574799 TOR3AQ9H497 397 aa9.53□□□□□ -0.88
CCDC40-212ENST00000574799 AGPAT4Q9NRZ5 378 aa9.53□□□□□ -0.88
CCDC40-212ENST00000574799 SETD4Q9NVD3 440 aa9.53□□□□□ -0.88
CCDC40-212ENST00000574799 INTS10Q9NVR2 710 aaKnown RBP9.53□□□□□ -0.88
CCDC40-212ENST00000574799 ACTR3BQ9P1U1 418 aa9.53□□□□□ -0.88
CCDC40-212ENST00000574799 ALDH1A2O94788 518 aa9.53□□□□□ -0.88
CCDC40-212ENST00000574799 DDX5P17844 614 aaKnown RBP9.53□□□□□ -0.88
CCDC40-212ENST00000574799 HTR1BP28222 390 aa9.53□□□□□ -0.88
CCDC40-212ENST00000574799 HADHAP40939 763 aa9.53□□□□□ -0.88
CCDC40-212ENST00000574799 GRM5P41594 1212 aa9.53□□□□□ -0.88
CCDC40-212ENST00000574799 LEPRP48357 1165 aaKnown RBP9.53□□□□□ -0.88
CCDC40-212ENST00000574799 NDST1P52848 882 aa9.53□□□□□ -0.88
CCDC40-212ENST00000574799 FAM209AQ5JX71 171 aa9.53□□□□□ -0.88
CCDC40-212ENST00000574799 SPANXN2Q5MJ10 180 aa9.53□□□□□ -0.88
CCDC40-212ENST00000574799 UBXN11Q5T124 520 aa9.53□□□□□ -0.88
CCDC40-212ENST00000574799 AGAP9Q5VTM2 703 aa9.53□□□□□ -0.88
CCDC40-212ENST00000574799 TTC23LQ6PF05 361 aa9.53□□□□□ -0.88
CCDC40-212ENST00000574799 CCBE1Q6UXH8 406 aaPredicted RBP9.53□□□□□ -0.88
CCDC40-212ENST00000574799 ACOT1Q86TX2 421 aa9.53□□□□□ -0.88
CCDC40-212ENST00000574799 ARRDC4Q8NCT1 418 aa9.53□□□□□ -0.88
CCDC40-212ENST00000574799 SMG8Q8ND04 991 aaKnown RBP9.53□□□□□ -0.88
CCDC40-212ENST00000574799 BHMTQ93088 406 aa9.53□□□□□ -0.88
CCDC40-212ENST00000574799 WNT8BQ93098 351 aa9.53□□□□□ -0.88
CCDC40-212ENST00000574799 MCRS1Q96EZ8 462 aa9.53□□□□□ -0.88
CCDC40-212ENST00000574799 FEM1CQ96JP0 617 aa9.53□□□□□ -0.88
CCDC40-212ENST00000574799 DOK1Q99704 481 aa9.53□□□□□ -0.88
CCDC40-212ENST00000574799 NT5C1AQ9BXI3 368 aa9.53□□□□□ -0.88
CCDC40-212ENST00000574799 RHOJQ9H4E5 214 aa9.53□□□□□ -0.88
CCDC40-212ENST00000574799 NSMCE4AQ9NXX6 385 aa9.53□□□□□ -0.88
CCDC40-212ENST00000574799 RABL2AQ9UBK7 228 aaPredicted RBP9.53□□□□□ -0.88
CCDC40-212ENST00000574799 NUDT5Q9UKK9 219 aa9.53□□□□□ -0.88
CCDC40-212ENST00000574799 BTRCQ9Y297 605 aa9.53□□□□□ -0.88
CCDC40-212ENST00000574799 UGT2A1Q9Y4X1 527 aa9.53□□□□□ -0.88
CCDC40-212ENST00000574799 PCDHB3Q9Y5E6 796 aa9.53□□□□□ -0.88
CCDC40-212ENST00000574799 KRT87PA6NCN2 255 aa9.52□□□□□ -0.88
CCDC40-212ENST00000574799 MYADML2A6NDP7 307 aa9.52□□□□□ -0.88
CCDC40-212ENST00000574799 H3BMM5 538 aa9.52□□□□□ -0.88
CCDC40-212ENST00000574799 TRIM24O15164 1050 aa9.52□□□□□ -0.88
CCDC40-212ENST00000574799 XPNPEP2O43895 674 aa9.52□□□□□ -0.88
CCDC40-212ENST00000574799 MFSD11O43934 449 aa9.52□□□□□ -0.88
CCDC40-212ENST00000574799 JRKO75564 520 aa9.52□□□□□ -0.88
CCDC40-212ENST00000574799 FTH1P02794 183 aa9.52□□□□□ -0.88
CCDC40-212ENST00000574799 CYP4B1P13584 511 aa9.52□□□□□ -0.88
CCDC40-212ENST00000574799 HGFP14210 728 aa9.52□□□□□ -0.88
CCDC40-212ENST00000574799 RFC2P35250 354 aa9.52□□□□□ -0.88
CCDC40-212ENST00000574799 ALDH7A1P49419 539 aaKnown RBP9.52□□□□□ -0.88
CCDC40-212ENST00000574799 SULT1E1P49888 294 aa9.52□□□□□ -0.88
CCDC40-212ENST00000574799 OR2B6P58173 313 aa9.52□□□□□ -0.88
CCDC40-212ENST00000574799 DAG1Q14118 895 aa9.52□□□□□ -0.88
CCDC40-212ENST00000574799 TRIP4Q15650 581 aaPredicted RBP9.52□□□□□ -0.88
CCDC40-212ENST00000574799 CCDC58Q4VC31 144 aa9.52□□□□□ -0.88
CCDC40-212ENST00000574799 STEAP4Q687X5 459 aa9.52□□□□□ -0.88
CCDC40-212ENST00000574799 ZNF470Q6ECI4 717 aa9.52□□□□□ -0.88
CCDC40-212ENST00000574799 DESI1Q6ICB0 168 aa9.52□□□□□ -0.88
CCDC40-212ENST00000574799 ARHGAP36Q6ZRI8 547 aa9.52□□□□□ -0.88
CCDC40-212ENST00000574799 OR6P1Q8NGX9 317 aa9.52□□□□□ -0.88
CCDC40-212ENST00000574799 ROPN1LQ96C74 230 aa9.52□□□□□ -0.88
CCDC40-212ENST00000574799 DNAI2Q9GZS0 605 aa9.52□□□□□ -0.88
CCDC40-212ENST00000574799 WDR6Q9NNW5 1121 aaKnown RBP9.52□□□□□ -0.88
CCDC40-212ENST00000574799 MID1IP1Q9NPA3 183 aa9.52□□□□□ -0.88
CCDC40-212ENST00000574799 LIMD1Q9UGP4 676 aa9.52□□□□□ -0.88
CCDC40-212ENST00000574799 TESMINQ9Y4I5 508 aa9.52□□□□□ -0.88
CCDC40-212ENST00000574799 FAM25AB3EWG3 89 aa9.52□□□□□ -0.89
CCDC40-212ENST00000574799 FAM25CB3EWG5 89 aa9.52□□□□□ -0.89
CCDC40-212ENST00000574799 FAM25GB3EWG6 89 aa9.52□□□□□ -0.89
CCDC40-212ENST00000574799 G3V2T6 193 aa9.52□□□□□ -0.89
CCDC40-212ENST00000574799 TEX28O15482 410 aa9.52□□□□□ -0.89
CCDC40-212ENST00000574799 TSC22D2O75157 780 aa9.52□□□□□ -0.89
CCDC40-212ENST00000574799 SEC14L2O76054 403 aa9.52□□□□□ -0.89
CCDC40-212ENST00000574799 LRIG2O94898 1065 aa9.52□□□□□ -0.89
CCDC40-212ENST00000574799 PRKCGP05129 697 aa9.52□□□□□ -0.89
CCDC40-212ENST00000574799 IFI30P13284 250 aa9.52□□□□□ -0.89
CCDC40-212ENST00000574799 MTHFRP42898 656 aa9.52□□□□□ -0.89
CCDC40-212ENST00000574799 GSK3BP49841 420 aa9.52□□□□□ -0.89
CCDC40-212ENST00000574799 CCT8P50990 548 aa9.52□□□□□ -0.89
CCDC40-212ENST00000574799 ARSFP54793 590 aa9.52□□□□□ -0.89
CCDC40-212ENST00000574799 AQP6Q13520 282 aa9.52□□□□□ -0.89
CCDC40-212ENST00000574799 GTF2H3Q13889 308 aa9.52□□□□□ -0.89
CCDC40-212ENST00000574799 RBM48Q5RL73 367 aaKnown RBP9.52□□□□□ -0.89
CCDC40-212ENST00000574799 FKBP9P1Q75LS8 142 aa9.52□□□□□ -0.89
CCDC40-212ENST00000574799 PSTKQ8IV42 348 aaKnown RBP9.52□□□□□ -0.89
CCDC40-212ENST00000574799 DENND6AQ8IWF6 608 aa9.52□□□□□ -0.89
CCDC40-212ENST00000574799 ZNF567Q8N184 647 aa9.52□□□□□ -0.89
CCDC40-212ENST00000574799 UBASH3BQ8TF42 649 aa9.52□□□□□ -0.89
CCDC40-212ENST00000574799 TMBIM1Q969X1 311 aa9.52□□□□□ -0.89
CCDC40-212ENST00000574799 ZUFSPQ96AP4 578 aa9.52□□□□□ -0.89
CCDC40-212ENST00000574799 C18orf25Q96B23 403 aaPredicted RBP9.52□□□□□ -0.89
CCDC40-212ENST00000574799 CCDC126Q96EE4 140 aa9.52□□□□□ -0.89
CCDC40-212ENST00000574799 LRCH3Q96II8 777 aa9.52□□□□□ -0.89
CCDC40-212ENST00000574799 HPDLQ96IR7 371 aa9.52□□□□□ -0.89
CCDC40-212ENST00000574799 MAELQ96JY0 434 aaKnown RBP9.52□□□□□ -0.89
CCDC40-212ENST00000574799 PSD2Q9BQI7 771 aa9.52□□□□□ -0.89
CCDC40-212ENST00000574799 TTYH2Q9BSA4 534 aa9.52□□□□□ -0.89
CCDC40-212ENST00000574799 RIBC2Q9H4K1 309 aa9.52□□□□□ -0.89
CCDC40-212ENST00000574799 SMURF2Q9HAU4 748 aa9.52□□□□□ -0.89
CCDC40-212ENST00000574799 CPNE5Q9HCH3 593 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms