RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 NOMO1Q15155 1222 aa17.92■□□□□ 0.46
CHD3-214ENST00000572579 PCSK7Q16549 785 aa17.92■□□□□ 0.46
CHD3-214ENST00000572579 TEX44Q53QW1 395 aa17.92■□□□□ 0.46
CHD3-214ENST00000572579 ALS2CLQ60I27 953 aa17.92■□□□□ 0.46
CHD3-214ENST00000572579 ADGRG6Q86SQ4 1221 aa17.92■□□□□ 0.46
CHD3-214ENST00000572579 RFX6Q8HWS3 928 aa17.92■□□□□ 0.46
CHD3-214ENST00000572579 RHOT2Q8IXI1 618 aa17.92■□□□□ 0.46
CHD3-214ENST00000572579 BMPERQ8N8U9 685 aa17.92■□□□□ 0.46
CHD3-214ENST00000572579 HTR3CQ8WXA8 447 aa17.92■□□□□ 0.46
CHD3-214ENST00000572579 JPH3Q8WXH2 748 aaPredicted RBP17.92■□□□□ 0.46
CHD3-214ENST00000572579 ADGRE3Q9BY15 652 aa17.92■□□□□ 0.46
CHD3-214ENST00000572579 TSPY26PQ9H489 355 aa17.92■□□□□ 0.46
CHD3-214ENST00000572579 ZFYVE1Q9HBF4 777 aa17.92■□□□□ 0.46
CHD3-214ENST00000572579 GLOD4Q9HC38 313 aa17.92■□□□□ 0.46
CHD3-214ENST00000572579 MAGEE1Q9HCI5 957 aa17.92■□□□□ 0.46
CHD3-214ENST00000572579 PRDM8Q9NQV8 689 aa17.92■□□□□ 0.46
CHD3-214ENST00000572579 WDR70Q9NW82 654 aa17.92■□□□□ 0.46
CHD3-214ENST00000572579 UBP1Q9NZI7 540 aa17.92■□□□□ 0.46
CHD3-214ENST00000572579 PKD2L2Q9NZM6 624 aa17.92■□□□□ 0.46
CHD3-214ENST00000572579 SEPT10Q9P0V9 454 aa17.92■□□□□ 0.46
CHD3-214ENST00000572579 PRR19A6NJB7 356 aa17.91■□□□□ 0.46
CHD3-214ENST00000572579 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.91■□□□□ 0.46
CHD3-214ENST00000572579 GRID2O43424 1007 aa17.91■□□□□ 0.46
CHD3-214ENST00000572579 BPIP17213 487 aa17.91■□□□□ 0.46
CHD3-214ENST00000572579 CYP4F2P78329 520 aa17.91■□□□□ 0.46
CHD3-214ENST00000572579 CDK18Q07002 472 aa17.91■□□□□ 0.46
CHD3-214ENST00000572579 PRKD1Q15139 912 aaPredicted RBP17.91■□□□□ 0.46
CHD3-214ENST00000572579 TMEM71Q6P5X7 295 aa17.91■□□□□ 0.46
CHD3-214ENST00000572579 TEKT5Q96M29 485 aa17.91■□□□□ 0.46
CHD3-214ENST00000572579 ZNF830Q96NB3 372 aaPredicted RBP17.91■□□□□ 0.46
CHD3-214ENST00000572579 MAK16Q9BXY0 300 aaKnown RBP17.91■□□□□ 0.46
CHD3-214ENST00000572579 B3GNT4Q9C0J1 378 aa17.91■□□□□ 0.46
CHD3-214ENST00000572579 OR2AG1Q9H205 316 aa17.91■□□□□ 0.46
CHD3-214ENST00000572579 ZNF711Q9Y462 761 aa17.91■□□□□ 0.46
CHD3-214ENST00000572579 PCDHGA3Q9Y5H0 932 aa17.91■□□□□ 0.46
CHD3-214ENST00000572579 B3GALT1Q9Y5Z6 326 aa17.91■□□□□ 0.46
CHD3-214ENST00000572579 ALG6Q9Y672 507 aa17.91■□□□□ 0.46
CHD3-214ENST00000572579 COL6A6A6NMZ7 2263 aa17.91■□□□□ 0.46
CHD3-214ENST00000572579 MTX2O75431 263 aa17.9■□□□□ 0.46
CHD3-214ENST00000572579 PMPCBO75439 489 aa17.9■□□□□ 0.46
CHD3-214ENST00000572579 SLC1A1P43005 524 aa17.9■□□□□ 0.46
CHD3-214ENST00000572579 MARCKSL1P49006 195 aa17.9■□□□□ 0.46
CHD3-214ENST00000572579 NFATC2Q13469 925 aa17.9■□□□□ 0.46
CHD3-214ENST00000572579 TRA2AQ13595 282 aaKnown RBP eCLIP17.9■□□□□ 0.46
CHD3-214ENST00000572579 KDELC1Q6UW63 502 aa17.9■□□□□ 0.46
CHD3-214ENST00000572579 ARHGAP22Q7Z5H3 698 aa17.9■□□□□ 0.46
CHD3-214ENST00000572579 ZNF605Q86T29 641 aa17.9■□□□□ 0.46
CHD3-214ENST00000572579 ZNF547Q8IVP9 402 aa17.9■□□□□ 0.46
CHD3-214ENST00000572579 RHOT1Q8IXI2 618 aa17.9■□□□□ 0.46
CHD3-214ENST00000572579 TC2NQ8N9U0 490 aa17.9■□□□□ 0.46
CHD3-214ENST00000572579 CCHCR1Q8TD31 782 aa17.9■□□□□ 0.46
CHD3-214ENST00000572579 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.9■□□□□ 0.46
CHD3-214ENST00000572579 ART4Q93070 314 aa17.9■□□□□ 0.46
CHD3-214ENST00000572579 TAAR9Q96RI9 348 aa17.9■□□□□ 0.46
CHD3-214ENST00000572579 SLC38A3Q99624 504 aa17.9■□□□□ 0.46
CHD3-214ENST00000572579 SPATA16Q9BXB7 569 aa17.9■□□□□ 0.46
CHD3-214ENST00000572579 SPRY4Q9C004 299 aa17.9■□□□□ 0.46
CHD3-214ENST00000572579 CARD9Q9H257 536 aa17.9■□□□□ 0.46
CHD3-214ENST00000572579 RMI1Q9H9A7 625 aa17.9■□□□□ 0.46
CHD3-214ENST00000572579 INTUQ9ULD6 942 aa17.9■□□□□ 0.46
CHD3-214ENST00000572579 PCDHGA4Q9Y5G9 962 aa17.9■□□□□ 0.46
CHD3-214ENST00000572579 AKR1B15C9JRZ8 316 aaPredicted RBP17.89■□□□□ 0.45
CHD3-214ENST00000572579 CHUKO15111 745 aa17.89■□□□□ 0.45
CHD3-214ENST00000572579 CST8O60676 142 aa17.89■□□□□ 0.45
CHD3-214ENST00000572579 SNX2O60749 519 aa17.89■□□□□ 0.45
CHD3-214ENST00000572579 ZFXP17010 805 aaPredicted RBP17.89■□□□□ 0.45
CHD3-214ENST00000572579 DCDC1P59894 354 aa17.89■□□□□ 0.45
CHD3-214ENST00000572579 UBE2IP63279 158 aaKnown RBP17.89■□□□□ 0.45
CHD3-214ENST00000572579 GPLD1P80108 840 aa17.89■□□□□ 0.45
CHD3-214ENST00000572579 HHEXQ03014 270 aa17.89■□□□□ 0.45
CHD3-214ENST00000572579 BIRC2Q13490 618 aa17.89■□□□□ 0.45
CHD3-214ENST00000572579 PEX6Q13608 980 aa17.89■□□□□ 0.45
CHD3-214ENST00000572579 SLC14A2Q15849 920 aa17.89■□□□□ 0.45
CHD3-214ENST00000572579 SKOR2Q2VWA4 1001 aaPredicted RBP17.89■□□□□ 0.45
CHD3-214ENST00000572579 AGBL5Q8NDL9 886 aa17.89■□□□□ 0.45
CHD3-214ENST00000572579 EXTL1Q92935 676 aa17.89■□□□□ 0.45
CHD3-214ENST00000572579 NKD1Q969G9 470 aa17.89■□□□□ 0.45
CHD3-214ENST00000572579 SGF29Q96ES7 293 aa17.89■□□□□ 0.45
CHD3-214ENST00000572579 MED8Q96G25 268 aa17.89■□□□□ 0.45
CHD3-214ENST00000572579 PLEKHG4BQ96PX9 1271 aa17.89■□□□□ 0.45
CHD3-214ENST00000572579 HERPUD2Q9BSE4 406 aa17.89■□□□□ 0.45
CHD3-214ENST00000572579 TBC1D10AQ9BXI6 508 aa17.89■□□□□ 0.45
CHD3-214ENST00000572579 TRIM39Q9HCM9 518 aa17.89■□□□□ 0.45
CHD3-214ENST00000572579 SARS2Q9NP81 518 aaKnown RBP17.89■□□□□ 0.45
CHD3-214ENST00000572579 HAUS2Q9NVX0 235 aa17.89■□□□□ 0.45
CHD3-214ENST00000572579 OGFRQ9NZT2 677 aa17.89■□□□□ 0.45
CHD3-214ENST00000572579 NFKBIL1Q9UBC1 381 aaPredicted RBP17.89■□□□□ 0.45
CHD3-214ENST00000572579 LOC285095A0A1B0GVY8 99 aa17.88■□□□□ 0.45
CHD3-214ENST00000572579 EFCAB7A8K855 629 aa17.88■□□□□ 0.45
CHD3-214ENST00000572579 A8MU76 341 aa17.88■□□□□ 0.45
CHD3-214ENST00000572579 PPP1R12AO14974 1030 aaPredicted RBP17.88■□□□□ 0.45
CHD3-214ENST00000572579 SLC25A14O95258 325 aaPredicted RBP17.88■□□□□ 0.45
CHD3-214ENST00000572579 NDST3O95803 873 aa17.88■□□□□ 0.45
CHD3-214ENST00000572579 SLC4A1P02730 911 aa17.88■□□□□ 0.45
CHD3-214ENST00000572579 F3P13726 295 aa17.88■□□□□ 0.45
CHD3-214ENST00000572579 PTMSP20962 102 aa17.88■□□□□ 0.45
CHD3-214ENST00000572579 CHRNA4P43681 627 aa17.88■□□□□ 0.45
CHD3-214ENST00000572579 MANEAQ5SRI9 462 aa17.88■□□□□ 0.45
CHD3-214ENST00000572579 KAZNQ674X7 775 aa17.88■□□□□ 0.45
CHD3-214ENST00000572579 ANKS6Q68DC2 871 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms