RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 HNRNPKP61978 463 aaKnown RBP eCLIP6.92□□□□□ -1.3
SMG6-209ENST00000571442 B4GALNT1Q00973 533 aa6.92□□□□□ -1.3
SMG6-209ENST00000571442 SEPT6Q14141 434 aa6.92□□□□□ -1.3
SMG6-209ENST00000571442 TRIP6Q15654 476 aaKnown RBP6.92□□□□□ -1.3
SMG6-209ENST00000571442 SMAD1Q15797 465 aaKnown RBP6.92□□□□□ -1.3
SMG6-209ENST00000571442 PYCR3Q53H96 274 aa6.92□□□□□ -1.3
SMG6-209ENST00000571442 CES3Q6UWW8 571 aa6.92□□□□□ -1.3
SMG6-209ENST00000571442 CAND1Q86VP6 1230 aaKnown RBP6.92□□□□□ -1.3
SMG6-209ENST00000571442 ZNF547Q8IVP9 402 aa6.92□□□□□ -1.3
SMG6-209ENST00000571442 SPNS2Q8IVW8 549 aa6.92□□□□□ -1.3
SMG6-209ENST00000571442 SLC35F3Q8IY50 421 aa6.92□□□□□ -1.3
SMG6-209ENST00000571442 RAVER1Q8IY67 606 aaKnown RBP6.92□□□□□ -1.3
SMG6-209ENST00000571442 NAT8LQ8N9F0 302 aa6.92□□□□□ -1.3
SMG6-209ENST00000571442 OR13J1Q8NGT2 312 aa6.92□□□□□ -1.3
SMG6-209ENST00000571442 OR4C6Q8NH72 309 aa6.92□□□□□ -1.3
SMG6-209ENST00000571442 BTN2A2Q8WVV5 523 aa6.92□□□□□ -1.3
SMG6-209ENST00000571442 PATE1Q8WXA2 126 aa6.92□□□□□ -1.3
SMG6-209ENST00000571442 GLYATL1Q969I3 302 aa6.92□□□□□ -1.3
SMG6-209ENST00000571442 CNDP2Q96KP4 475 aaKnown RBP6.92□□□□□ -1.3
SMG6-209ENST00000571442 APOLD1Q96LR9 279 aa6.92□□□□□ -1.3
SMG6-209ENST00000571442 TBATAQ96M53 351 aa6.92□□□□□ -1.3
SMG6-209ENST00000571442 PWWP2AQ96N64 755 aa6.92□□□□□ -1.3
SMG6-209ENST00000571442 PLEKHG4BQ96PX9 1271 aa6.92□□□□□ -1.3
SMG6-209ENST00000571442 OR2AG1Q9H205 316 aa6.92□□□□□ -1.3
SMG6-209ENST00000571442 EIF2B3Q9NR50 452 aaKnown RBP6.92□□□□□ -1.3
SMG6-209ENST00000571442 HOMER3Q9NSC5 361 aa6.92□□□□□ -1.3
SMG6-209ENST00000571442 SPATS2LQ9NUQ6 558 aaKnown RBP6.92□□□□□ -1.3
SMG6-209ENST00000571442 SYBUQ9NX95 663 aa6.92□□□□□ -1.3
SMG6-209ENST00000571442 HACD3Q9P035 362 aa6.92□□□□□ -1.3
SMG6-209ENST00000571442 SIRPGQ9P1W8 387 aa6.92□□□□□ -1.3
SMG6-209ENST00000571442 SPASTQ9UBP0 616 aa6.92□□□□□ -1.3
SMG6-209ENST00000571442 SLC23A2Q9UGH3 650 aa6.92□□□□□ -1.3
SMG6-209ENST00000571442 PCYOX1Q9UHG3 505 aa6.92□□□□□ -1.3
SMG6-209ENST00000571442 WASF3Q9UPY6 502 aa6.92□□□□□ -1.3
SMG6-209ENST00000571442 PIKFYVEQ9Y2I7 2098 aa6.91□□□□□ -1.3
SMG6-209ENST00000571442 CCDC162PA2VCL2 907 aa6.91□□□□□ -1.3
SMG6-209ENST00000571442 ERI2A8K979 691 aaKnown RBP6.91□□□□□ -1.3
SMG6-209ENST00000571442 AGAP14A8MT82 685 aa6.91□□□□□ -1.3
SMG6-209ENST00000571442 E7EVH7 732 aa6.91□□□□□ -1.3
SMG6-209ENST00000571442 LMO7DNF2Z398 122 aa6.91□□□□□ -1.3
SMG6-209ENST00000571442 H3BM21 787 aa6.91□□□□□ -1.3
SMG6-209ENST00000571442 GOLGA8MH3BSY2 632 aa6.91□□□□□ -1.3
SMG6-209ENST00000571442 H7C0S8 307 aa6.91□□□□□ -1.3
SMG6-209ENST00000571442 YKT6O15498 198 aa6.91□□□□□ -1.3
SMG6-209ENST00000571442 TTI1O43156 1089 aa6.91□□□□□ -1.3
SMG6-209ENST00000571442 PSMD3O43242 534 aa6.91□□□□□ -1.3
SMG6-209ENST00000571442 NUAK1O60285 661 aa6.91□□□□□ -1.3
SMG6-209ENST00000571442 NOBOXO60393 691 aa6.91□□□□□ -1.3
SMG6-209ENST00000571442 SRP72O76094 671 aaKnown RBP6.91□□□□□ -1.3
SMG6-209ENST00000571442 SLC25A14O95258 325 aaPredicted RBP6.91□□□□□ -1.3
SMG6-209ENST00000571442 PRAMEF1O95521 474 aa6.91□□□□□ -1.3
SMG6-209ENST00000571442 ASMTLO95671 621 aa6.91□□□□□ -1.3
SMG6-209ENST00000571442 ECEL1O95672 775 aa6.91□□□□□ -1.3
SMG6-209ENST00000571442 LDOC1O95751 146 aaPredicted RBP6.91□□□□□ -1.3
SMG6-209ENST00000571442 FTH1P19P0C7X4 201 aa6.91□□□□□ -1.3
SMG6-209ENST00000571442 CEACAM1P13688 526 aa6.91□□□□□ -1.3
SMG6-209ENST00000571442 SPINK2P20155 84 aa6.91□□□□□ -1.3
SMG6-209ENST00000571442 TPSB2P20231 275 aa6.91□□□□□ -1.3
SMG6-209ENST00000571442 ARNTP27540 789 aa6.91□□□□□ -1.3
SMG6-209ENST00000571442 NMBRP28336 390 aa6.91□□□□□ -1.3
SMG6-209ENST00000571442 MC4RP32245 332 aa6.91□□□□□ -1.3
SMG6-209ENST00000571442 FOXN2P32314 431 aa6.91□□□□□ -1.3
SMG6-209ENST00000571442 ACTN2P35609 894 aa6.91□□□□□ -1.3
SMG6-209ENST00000571442 LMAN1P49257 510 aa6.91□□□□□ -1.3
SMG6-209ENST00000571442 ACADVLP49748 655 aa6.91□□□□□ -1.3
SMG6-209ENST00000571442 SIM1P81133 766 aaPredicted RBP6.91□□□□□ -1.3
SMG6-209ENST00000571442 CTBSQ01459 385 aa6.91□□□□□ -1.3
SMG6-209ENST00000571442 CDH17Q12864 832 aa6.91□□□□□ -1.3
SMG6-209ENST00000571442 PTK6Q13882 451 aa6.91□□□□□ -1.3
SMG6-209ENST00000571442 SEMA3AQ14563 771 aa6.91□□□□□ -1.3
SMG6-209ENST00000571442 SUZ12Q15022 739 aaKnown RBP6.91□□□□□ -1.3
SMG6-209ENST00000571442 TPSAB1Q15661 275 aa6.91□□□□□ -1.3
SMG6-209ENST00000571442 PLA2G4EQ3MJ16 856 aa6.91□□□□□ -1.3
SMG6-209ENST00000571442 PERM1Q5SV97 790 aa6.91□□□□□ -1.3
SMG6-209ENST00000571442 GPRC6AQ5T6X5 926 aa6.91□□□□□ -1.3
SMG6-209ENST00000571442 TSTD2Q5T7W7 516 aa6.91□□□□□ -1.3
SMG6-209ENST00000571442 RNASEH2BQ5TBB1 312 aaKnown RBP6.91□□□□□ -1.3
SMG6-209ENST00000571442 GUSBP11Q6P575 273 aa6.91□□□□□ -1.3
SMG6-209ENST00000571442 LRRC8BQ6P9F7 803 aa6.91□□□□□ -1.3
SMG6-209ENST00000571442 CRTC3Q6UUV7 619 aa6.91□□□□□ -1.3
SMG6-209ENST00000571442 PPP1R21Q6ZMI0 780 aa6.91□□□□□ -1.3
SMG6-209ENST00000571442 C11orf96Q7Z7L8 435 aa6.91□□□□□ -1.3
SMG6-209ENST00000571442 GLRX5Q86SX6 157 aa6.91□□□□□ -1.3
SMG6-209ENST00000571442 JAMLQ86YT9 394 aa6.91□□□□□ -1.3
SMG6-209ENST00000571442 PIANPQ8IYJ0 282 aa6.91□□□□□ -1.3
SMG6-209ENST00000571442 BEND7Q8N7W2 519 aaPredicted RBP6.91□□□□□ -1.3
SMG6-209ENST00000571442 RASGEF1AQ8N9B8 481 aa6.91□□□□□ -1.3
SMG6-209ENST00000571442 DNAAF3Q8N9W5 541 aa6.91□□□□□ -1.3
SMG6-209ENST00000571442 KYQ8NBH2 561 aa6.91□□□□□ -1.3
SMG6-209ENST00000571442 ZNF398Q8TD17 642 aa6.91□□□□□ -1.3
SMG6-209ENST00000571442 GPBAR1Q8TDU6 330 aa6.91□□□□□ -1.3
SMG6-209ENST00000571442 STYXQ8WUJ0 223 aa6.91□□□□□ -1.3
SMG6-209ENST00000571442 SLCO2A1Q92959 643 aa6.91□□□□□ -1.3
SMG6-209ENST00000571442 CDKN2AIPNLQ96HQ2 116 aa6.91□□□□□ -1.3
SMG6-209ENST00000571442 PPP1R2P1Q96PQ5 205 aa6.91□□□□□ -1.3
SMG6-209ENST00000571442 VPS35Q96QK1 796 aa6.91□□□□□ -1.3
SMG6-209ENST00000571442 OR2M4Q96R27 311 aa6.91□□□□□ -1.3
SMG6-209ENST00000571442 RANBP9Q96S59 729 aa6.91□□□□□ -1.3
SMG6-209ENST00000571442 KRT12Q99456 494 aa6.91□□□□□ -1.3
SMG6-209ENST00000571442 NAP1L3Q99457 506 aaPredicted RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms