RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 TRIM62Q9BVG3 475 aa17.35■□□□□ 0.37
SCARF1-205ENST00000571272 INTS10Q9NVR2 710 aaKnown RBP17.35■□□□□ 0.37
SCARF1-205ENST00000571272 SH3GLB1Q9Y371 365 aa17.35■□□□□ 0.37
SCARF1-205ENST00000571272 HRH2P25021 359 aa17.35■□□□□ 0.37
SCARF1-205ENST00000571272 MAP4P27816 1152 aaKnown RBP17.35■□□□□ 0.37
SCARF1-205ENST00000571272 HTR7P34969 479 aa17.35■□□□□ 0.37
SCARF1-205ENST00000571272 PLIN5Q00G26 463 aa17.35■□□□□ 0.37
SCARF1-205ENST00000571272 YWHAHQ04917 246 aaPredicted RBP17.35■□□□□ 0.37
SCARF1-205ENST00000571272 RCAN2Q14206 197 aa17.35■□□□□ 0.37
SCARF1-205ENST00000571272 ANKRD26P1Q6NSI1 321 aa17.35■□□□□ 0.37
SCARF1-205ENST00000571272 MRNIPQ6NTE8 343 aa17.35■□□□□ 0.37
SCARF1-205ENST00000571272 CIR1Q86X95 450 aaPredicted RBP17.35■□□□□ 0.37
SCARF1-205ENST00000571272 LRRC49Q8IUZ0 686 aa17.35■□□□□ 0.37
SCARF1-205ENST00000571272 NUDT8Q8WV74 236 aa17.35■□□□□ 0.37
SCARF1-205ENST00000571272 SEMA3CQ99985 751 aa17.35■□□□□ 0.37
SCARF1-205ENST00000571272 FANCEQ9HB96 536 aa17.35■□□□□ 0.37
SCARF1-205ENST00000571272 CDC7O00311 574 aa17.34■□□□□ 0.37
SCARF1-205ENST00000571272 RHOBTB1O94844 696 aa17.34■□□□□ 0.37
SCARF1-205ENST00000571272 ALBP02768 609 aa17.34■□□□□ 0.37
SCARF1-205ENST00000571272 FMO4P31512 558 aa17.34■□□□□ 0.37
SCARF1-205ENST00000571272 ZFP36L2P47974 494 aaKnown RBP17.34■□□□□ 0.37
SCARF1-205ENST00000571272 FOXM1Q08050 763 aa17.34■□□□□ 0.37
SCARF1-205ENST00000571272 SLC44A4Q53GD3 710 aa17.34■□□□□ 0.37
SCARF1-205ENST00000571272 ANKS6Q68DC2 871 aa17.34■□□□□ 0.37
SCARF1-205ENST00000571272 OVOS1Q6IE37 1185 aa17.34■□□□□ 0.37
SCARF1-205ENST00000571272 UGT3A1Q6NUS8 523 aa17.34■□□□□ 0.37
SCARF1-205ENST00000571272 PTRH1Q86Y79 214 aaKnown RBP17.34■□□□□ 0.37
SCARF1-205ENST00000571272 UMODL1-AS1Q8N2C9 162 aa17.34■□□□□ 0.37
SCARF1-205ENST00000571272 BPIFB6Q8NFQ5 453 aa17.34■□□□□ 0.37
SCARF1-205ENST00000571272 SLC22A3O75751 556 aa17.34■□□□□ 0.37
SCARF1-205ENST00000571272 ITGB1P05556 798 aa17.34■□□□□ 0.37
SCARF1-205ENST00000571272 C7P10643 843 aa17.34■□□□□ 0.37
SCARF1-205ENST00000571272 HLCSP50747 726 aa17.34■□□□□ 0.37
SCARF1-205ENST00000571272 BMXP51813 675 aa17.34■□□□□ 0.37
SCARF1-205ENST00000571272 ADARB1P78563 741 aaKnown RBP17.34■□□□□ 0.37
SCARF1-205ENST00000571272 ATP1A4Q13733 1029 aa17.34■□□□□ 0.37
SCARF1-205ENST00000571272 CCNYL2Q5T2Q4 361 aa17.34■□□□□ 0.37
SCARF1-205ENST00000571272 FAM117BQ6P1L5 589 aa17.34■□□□□ 0.37
SCARF1-205ENST00000571272 PLEKHH3Q7Z736 793 aa17.34■□□□□ 0.37
SCARF1-205ENST00000571272 ITIH5Q86UX2 942 aa17.34■□□□□ 0.37
SCARF1-205ENST00000571272 DDHD1Q8NEL9 900 aa17.34■□□□□ 0.37
SCARF1-205ENST00000571272 RHEBL1Q8TAI7 183 aa17.34■□□□□ 0.37
SCARF1-205ENST00000571272 SGCDQ92629 289 aa17.34■□□□□ 0.37
SCARF1-205ENST00000571272 ACDQ96AP0 544 aa17.34■□□□□ 0.37
SCARF1-205ENST00000571272 TFB2MQ9H5Q4 396 aaKnown RBP17.34■□□□□ 0.37
SCARF1-205ENST00000571272 ZNF408Q9H9D4 720 aa17.34■□□□□ 0.37
SCARF1-205ENST00000571272 CATSPERZQ9NTU4 200 aa17.34■□□□□ 0.37
SCARF1-205ENST00000571272 EVLQ9UI08 416 aaPredicted RBP17.34■□□□□ 0.37
SCARF1-205ENST00000571272 CCL15-CCL14A0A0B4J2E2 113 aa17.34■□□□□ 0.37
SCARF1-205ENST00000571272 HAS3O00219 553 aa17.34■□□□□ 0.37
SCARF1-205ENST00000571272 NOL3O60936 208 aaKnown RBP17.34■□□□□ 0.37
SCARF1-205ENST00000571272 ECI2O75521 394 aa17.34■□□□□ 0.37
SCARF1-205ENST00000571272 IL12AP29459 219 aa17.34■□□□□ 0.37
SCARF1-205ENST00000571272 POLR2JP52435 117 aaKnown RBP17.34■□□□□ 0.37
SCARF1-205ENST00000571272 NFATC3Q12968 1075 aa17.34■□□□□ 0.37
SCARF1-205ENST00000571272 CCL15Q16663 113 aa17.34■□□□□ 0.37
SCARF1-205ENST00000571272 PLA2G4EQ3MJ16 856 aa17.34■□□□□ 0.37
SCARF1-205ENST00000571272 SLC2A7Q6PXP3 512 aa17.34■□□□□ 0.37
SCARF1-205ENST00000571272 USP51Q70EK9 711 aa17.34■□□□□ 0.37
SCARF1-205ENST00000571272 SYVN1Q86TM6 617 aa17.34■□□□□ 0.37
SCARF1-205ENST00000571272 SPATA2LQ8IUW3 424 aaPredicted RBP17.34■□□□□ 0.37
SCARF1-205ENST00000571272 OR2T11Q8NH01 316 aa17.34■□□□□ 0.37
SCARF1-205ENST00000571272 STAG3L4Q8TBR4 150 aa17.34■□□□□ 0.37
SCARF1-205ENST00000571272 GTF3C2Q8WUA4 911 aaPredicted RBP17.34■□□□□ 0.37
SCARF1-205ENST00000571272 COX4I2Q96KJ9 171 aa17.34■□□□□ 0.37
SCARF1-205ENST00000571272 PKMYT1Q99640 499 aa17.34■□□□□ 0.37
SCARF1-205ENST00000571272 ING2Q9H160 280 aa17.34■□□□□ 0.37
SCARF1-205ENST00000571272 AIG1Q9NVV5 245 aa17.34■□□□□ 0.37
SCARF1-205ENST00000571272 CPA4Q9UI42 421 aa17.34■□□□□ 0.37
SCARF1-205ENST00000571272 ZNF225Q9UK10 706 aa17.34■□□□□ 0.37
SCARF1-205ENST00000571272 DOCK3Q8IZD9 2030 aa17.33■□□□□ 0.37
SCARF1-205ENST00000571272 SHMT2P34897 504 aa17.33■□□□□ 0.36
SCARF1-205ENST00000571272 CBX3Q13185 183 aa17.33■□□□□ 0.36
SCARF1-205ENST00000571272 TGFBIQ15582 683 aa17.33■□□□□ 0.36
SCARF1-205ENST00000571272 COQ5Q5HYK3 327 aa17.33■□□□□ 0.36
SCARF1-205ENST00000571272 BEND5Q7L4P6 421 aa17.33■□□□□ 0.36
SCARF1-205ENST00000571272 SCML4Q8N228 414 aa17.33■□□□□ 0.36
SCARF1-205ENST00000571272 TMEM199Q8N511 208 aa17.33■□□□□ 0.36
SCARF1-205ENST00000571272 OR4L1Q8NH43 312 aa17.33■□□□□ 0.36
SCARF1-205ENST00000571272 HBEGFQ99075 208 aa17.33■□□□□ 0.36
SCARF1-205ENST00000571272 AARSD1Q9BTE6 412 aaKnown RBP17.33■□□□□ 0.36
SCARF1-205ENST00000571272 BDH2Q9BUT1 245 aa17.33■□□□□ 0.36
SCARF1-205ENST00000571272 ZYG11BQ9C0D3 744 aa17.33■□□□□ 0.36
SCARF1-205ENST00000571272 ADNPQ9H2P0 1102 aa17.33■□□□□ 0.36
SCARF1-205ENST00000571272 GALPQ9UBC7 116 aa17.33■□□□□ 0.36
SCARF1-205ENST00000571272 LOC285095A0A1B0GVY8 99 aa17.33■□□□□ 0.36
SCARF1-205ENST00000571272 H0Y858 1186 aa17.33■□□□□ 0.36
SCARF1-205ENST00000571272 TNFRSF10BO14763 440 aa17.33■□□□□ 0.36
SCARF1-205ENST00000571272 SNX2O60749 519 aa17.33■□□□□ 0.36
SCARF1-205ENST00000571272 RSL1D1O76021 490 aaKnown RBP17.33■□□□□ 0.36
SCARF1-205ENST00000571272 KCNH1O95259 989 aa17.33■□□□□ 0.36
SCARF1-205ENST00000571272 INHBBP09529 407 aa17.33■□□□□ 0.36
SCARF1-205ENST00000571272 CCNA2P20248 432 aa17.33■□□□□ 0.36
SCARF1-205ENST00000571272 GNA12Q03113 381 aa17.33■□□□□ 0.36
SCARF1-205ENST00000571272 AASDHQ4L235 1098 aaPredicted RBP17.33■□□□□ 0.36
SCARF1-205ENST00000571272 GLYATQ6IB77 296 aa17.33■□□□□ 0.36
SCARF1-205ENST00000571272 NAT16Q8N8M0 369 aa17.33■□□□□ 0.36
SCARF1-205ENST00000571272 KIAA1191Q96A73 305 aa17.33■□□□□ 0.36
SCARF1-205ENST00000571272 PPM1MQ96MI6 270 aa17.33■□□□□ 0.36
SCARF1-205ENST00000571272 SERPINB11Q96P15 392 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms