RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 MARSP56192 900 aaKnown RBP7.09□□□□□ -1.27
SMG6-205ENST00000570659 GEMIN4P57678 1058 aaKnown RBP7.09□□□□□ -1.27
SMG6-205ENST00000570659 KCNK10P57789 538 aa7.09□□□□□ -1.27
SMG6-205ENST00000570659 MAXP61244 160 aa7.09□□□□□ -1.27
SMG6-205ENST00000570659 PTSQ03393 145 aa7.09□□□□□ -1.27
SMG6-205ENST00000570659 LRRC63Q05C16 580 aa7.09□□□□□ -1.27
SMG6-205ENST00000570659 RAD51Q06609 339 aa7.09□□□□□ -1.27
SMG6-205ENST00000570659 HIF1AQ16665 826 aa7.09□□□□□ -1.27
SMG6-205ENST00000570659 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.09□□□□□ -1.27
SMG6-205ENST00000570659 ZNF789Q5FWF6 425 aa7.09□□□□□ -1.27
SMG6-205ENST00000570659 PLEKHS1Q5SXH7 462 aa7.09□□□□□ -1.27
SMG6-205ENST00000570659 ZFYVE27Q5T4F4 411 aa7.09□□□□□ -1.27
SMG6-205ENST00000570659 ADAMTSL4Q6UY14 1074 aa7.09□□□□□ -1.27
SMG6-205ENST00000570659 TMEM26Q6ZUK4 368 aa7.09□□□□□ -1.27
SMG6-205ENST00000570659 CYP4V2Q6ZWL3 525 aaPredicted RBP7.09□□□□□ -1.27
SMG6-205ENST00000570659 SYVN1Q86TM6 617 aa7.09□□□□□ -1.27
SMG6-205ENST00000570659 FAM71AQ8IYT1 594 aa7.09□□□□□ -1.27
SMG6-205ENST00000570659 IQCKQ8N0W5 287 aa7.09□□□□□ -1.27
SMG6-205ENST00000570659 FMR1NBQ8N0W7 255 aaPredicted RBP7.09□□□□□ -1.27
SMG6-205ENST00000570659 ARFGAP1Q8N6T3 406 aa7.09□□□□□ -1.27
SMG6-205ENST00000570659 GLIS1Q8NBF1 620 aa7.09□□□□□ -1.27
SMG6-205ENST00000570659 GPR150Q8NGU9 434 aa7.09□□□□□ -1.27
SMG6-205ENST00000570659 FAM172AQ8WUF8 416 aa7.09□□□□□ -1.27
SMG6-205ENST00000570659 PIH1D2Q8WWB5 315 aa7.09□□□□□ -1.27
SMG6-205ENST00000570659 NELFBQ8WX92 580 aa7.09□□□□□ -1.27
SMG6-205ENST00000570659 NRGNQ92686 78 aa7.09□□□□□ -1.27
SMG6-205ENST00000570659 EID2BQ96D98 161 aa7.09□□□□□ -1.27
SMG6-205ENST00000570659 CEP63Q96MT8 703 aa7.09□□□□□ -1.27
SMG6-205ENST00000570659 TUBGCP5Q96RT8 1024 aa7.09□□□□□ -1.27
SMG6-205ENST00000570659 PEBP4Q96S96 227 aa7.09□□□□□ -1.27
SMG6-205ENST00000570659 PCDHB18PQ96TA0 734 aa7.09□□□□□ -1.27
SMG6-205ENST00000570659 TSG101Q99816 390 aa7.09□□□□□ -1.27
SMG6-205ENST00000570659 MLPHQ9BV36 600 aaPredicted RBP7.09□□□□□ -1.27
SMG6-205ENST00000570659 RIOK2Q9BVS4 552 aaKnown RBP7.09□□□□□ -1.27
SMG6-205ENST00000570659 ZNF552Q9H707 407 aaPredicted RBP7.09□□□□□ -1.27
SMG6-205ENST00000570659 NOD2Q9HC29 1040 aa7.09□□□□□ -1.27
SMG6-205ENST00000570659 APEX2Q9UBZ4 518 aa7.09□□□□□ -1.27
SMG6-205ENST00000570659 ZNHIT2Q9UHR6 403 aa7.09□□□□□ -1.27
SMG6-205ENST00000570659 DNAJC12Q9UKB3 198 aa7.09□□□□□ -1.27
SMG6-205ENST00000570659 HPCAL4Q9UM19 191 aa7.09□□□□□ -1.27
SMG6-205ENST00000570659 FARSAQ9Y285 508 aaKnown RBP7.09□□□□□ -1.27
SMG6-205ENST00000570659 B3GNT3Q9Y2A9 372 aa7.09□□□□□ -1.27
SMG6-205ENST00000570659 WDR37Q9Y2I8 494 aa7.09□□□□□ -1.27
SMG6-205ENST00000570659 FHOD1Q9Y613 1164 aa7.09□□□□□ -1.27
SMG6-205ENST00000570659 MAP1AP78559 2803 aaPredicted RBP7.08□□□□□ -1.28
SMG6-205ENST00000570659 TCRBV5S1A1TA0A578 114 aa7.08□□□□□ -1.28
SMG6-205ENST00000570659 LILRA5A6NI73 299 aa7.08□□□□□ -1.28
SMG6-205ENST00000570659 C21orf140B9A014 251 aa7.08□□□□□ -1.28
SMG6-205ENST00000570659 CCP110O43303 1012 aa7.08□□□□□ -1.28
SMG6-205ENST00000570659 HCRTR1O43613 425 aa7.08□□□□□ -1.28
SMG6-205ENST00000570659 UBXN7O94888 489 aa7.08□□□□□ -1.28
SMG6-205ENST00000570659 F3P13726 295 aa7.08□□□□□ -1.28
SMG6-205ENST00000570659 LPOP22079 712 aaPredicted RBP7.08□□□□□ -1.28
SMG6-205ENST00000570659 IL4RP24394 825 aa7.08□□□□□ -1.28
SMG6-205ENST00000570659 ERCC5P28715 1186 aaPredicted RBP7.08□□□□□ -1.28
SMG6-205ENST00000570659 SERPINA4P29622 427 aa7.08□□□□□ -1.28
SMG6-205ENST00000570659 RORAP35398 523 aa7.08□□□□□ -1.28
SMG6-205ENST00000570659 SCNN1AP37088 669 aa7.08□□□□□ -1.28
SMG6-205ENST00000570659 KIR3DL1P43629 444 aa7.08□□□□□ -1.28
SMG6-205ENST00000570659 GPR1P46091 355 aa7.08□□□□□ -1.28
SMG6-205ENST00000570659 CSNK1DP48730 415 aa7.08□□□□□ -1.28
SMG6-205ENST00000570659 EPHA4P54764 986 aa7.08□□□□□ -1.28
SMG6-205ENST00000570659 BCL2L1Q07817 233 aa7.08□□□□□ -1.28
SMG6-205ENST00000570659 MTA1Q13330 715 aa7.08□□□□□ -1.28
SMG6-205ENST00000570659 TUBB3Q13509 450 aa7.08□□□□□ -1.28
SMG6-205ENST00000570659 GPR18Q14330 331 aa7.08□□□□□ -1.28
SMG6-205ENST00000570659 SEPT7Q16181 437 aaKnown RBP7.08□□□□□ -1.28
SMG6-205ENST00000570659 PTCHD3Q3KNS1 767 aa7.08□□□□□ -1.28
SMG6-205ENST00000570659 CACHD1Q5VU97 1274 aa7.08□□□□□ -1.28
SMG6-205ENST00000570659 HGSNATQ68CP4 663 aa7.08□□□□□ -1.28
SMG6-205ENST00000570659 LRRC66Q68CR7 880 aa7.08□□□□□ -1.28
SMG6-205ENST00000570659 PLEKHA7Q6IQ23 1121 aa7.08□□□□□ -1.28
SMG6-205ENST00000570659 Q6ZS92 163 aa7.08□□□□□ -1.28
SMG6-205ENST00000570659 PRSS42Q7Z5A4 293 aa7.08□□□□□ -1.28
SMG6-205ENST00000570659 GALNT13Q8IUC8 556 aa7.08□□□□□ -1.28
SMG6-205ENST00000570659 RHOT1Q8IXI2 618 aa7.08□□□□□ -1.28
SMG6-205ENST00000570659 ST6GALNAC3Q8NDV1 305 aa7.08□□□□□ -1.28
SMG6-205ENST00000570659 GRHL3Q8TE85 626 aa7.08□□□□□ -1.28
SMG6-205ENST00000570659 LRRN4Q8WUT4 740 aa7.08□□□□□ -1.28
SMG6-205ENST00000570659 NAT14Q8WUY8 206 aa7.08□□□□□ -1.28
SMG6-205ENST00000570659 CASKIN2Q8WXE0 1202 aa7.08□□□□□ -1.28
SMG6-205ENST00000570659 THAP4Q8WY91 577 aa7.08□□□□□ -1.28
SMG6-205ENST00000570659 MR1Q95460 341 aa7.08□□□□□ -1.28
SMG6-205ENST00000570659 SLC41A2Q96JW4 573 aa7.08□□□□□ -1.28
SMG6-205ENST00000570659 SPATA32Q96LK8 384 aa7.08□□□□□ -1.28
SMG6-205ENST00000570659 MCCC1Q96RQ3 725 aaPredicted RBP7.08□□□□□ -1.28
SMG6-205ENST00000570659 MDFIQ99750 246 aa7.08□□□□□ -1.28
SMG6-205ENST00000570659 MAP3K3Q99759 626 aa7.08□□□□□ -1.28
SMG6-205ENST00000570659 ATP13A3Q9H7F0 1226 aa7.08□□□□□ -1.28
SMG6-205ENST00000570659 ETNK2Q9NVF9 386 aa7.08□□□□□ -1.28
SMG6-205ENST00000570659 GPR83Q9NYM4 423 aa7.08□□□□□ -1.28
SMG6-205ENST00000570659 NOCTQ9UK39 431 aaKnown RBP7.08□□□□□ -1.28
SMG6-205ENST00000570659 TMPRSS11EQ9UL52 423 aa7.08□□□□□ -1.28
SMG6-205ENST00000570659 FZD10Q9ULW2 581 aa7.08□□□□□ -1.28
SMG6-205ENST00000570659 COPG1Q9Y678 874 aaKnown RBP7.08□□□□□ -1.28
SMG6-205ENST00000570659 NCOA6Q14686 2063 aaPredicted RBP7.08□□□□□ -1.28
SMG6-205ENST00000570659 PCM1Q15154 2024 aa7.08□□□□□ -1.28
SMG6-205ENST00000570659 CACNA1CQ13936 2221 aa7.08□□□□□ -1.28
SMG6-205ENST00000570659 BIN1O00499 593 aa7.07□□□□□ -1.28
SMG6-205ENST00000570659 ZNHIT1O43257 154 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms