RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 OR2AG1Q9H205 316 aa8.52□□□□□ -1.05
CTDNEP1-203ENST00000570385 OSGEPL1Q9H4B0 414 aa8.52□□□□□ -1.05
CTDNEP1-203ENST00000570385 GPN2Q9H9Y4 310 aaPredicted RBP8.52□□□□□ -1.05
CTDNEP1-203ENST00000570385 CBX8Q9HC52 389 aa8.52□□□□□ -1.05
CTDNEP1-203ENST00000570385 SARS2Q9NP81 518 aaKnown RBP8.52□□□□□ -1.05
CTDNEP1-203ENST00000570385 ZNF71Q9NQZ8 489 aaPredicted RBP8.52□□□□□ -1.05
CTDNEP1-203ENST00000570385 RCOR3Q9P2K3 495 aaPredicted RBP8.52□□□□□ -1.05
CTDNEP1-203ENST00000570385 ATXN10Q9UBB4 475 aa8.52□□□□□ -1.05
CTDNEP1-203ENST00000570385 PILRAQ9UKJ1 303 aa8.52□□□□□ -1.05
CTDNEP1-203ENST00000570385 BZW2Q9Y6E2 419 aaKnown RBP8.52□□□□□ -1.05
CTDNEP1-203ENST00000570385 ANKRD66B4E2M5 251 aa8.51□□□□□ -1.05
CTDNEP1-203ENST00000570385 GRID2O43424 1007 aa8.51□□□□□ -1.05
CTDNEP1-203ENST00000570385 MTX2O75431 263 aa8.51□□□□□ -1.05
CTDNEP1-203ENST00000570385 STK17BO94768 372 aa8.51□□□□□ -1.05
CTDNEP1-203ENST00000570385 PROSCO94903 275 aa8.51□□□□□ -1.05
CTDNEP1-203ENST00000570385 PYGLP06737 847 aa8.51□□□□□ -1.05
CTDNEP1-203ENST00000570385 CA4P22748 312 aa8.51□□□□□ -1.05
CTDNEP1-203ENST00000570385 PBX1P40424 430 aa8.51□□□□□ -1.05
CTDNEP1-203ENST00000570385 CCR10P46092 362 aa8.51□□□□□ -1.05
CTDNEP1-203ENST00000570385 SEPHS1P49903 392 aa8.51□□□□□ -1.05
CTDNEP1-203ENST00000570385 GFERP55789 205 aa8.51□□□□□ -1.05
CTDNEP1-203ENST00000570385 UBASH3AP57075 661 aa8.51□□□□□ -1.05
CTDNEP1-203ENST00000570385 RAB15P59190 212 aa8.51□□□□□ -1.05
CTDNEP1-203ENST00000570385 ZBED6P86452 979 aa8.51□□□□□ -1.05
CTDNEP1-203ENST00000570385 MC2RQ01718 297 aa8.51□□□□□ -1.05
CTDNEP1-203ENST00000570385 FOXM1Q08050 763 aa8.51□□□□□ -1.05
CTDNEP1-203ENST00000570385 KCNAB2Q13303 367 aa8.51□□□□□ -1.05
CTDNEP1-203ENST00000570385 SEPT7Q16181 437 aaKnown RBP8.51□□□□□ -1.05
CTDNEP1-203ENST00000570385 IGFBP7Q16270 282 aa8.51□□□□□ -1.05
CTDNEP1-203ENST00000570385 PCSK7Q16549 785 aa8.51□□□□□ -1.05
CTDNEP1-203ENST00000570385 DEFB109BQ30KR1 87 aa8.51□□□□□ -1.05
CTDNEP1-203ENST00000570385 FIGNQ5HY92 759 aa8.51□□□□□ -1.05
CTDNEP1-203ENST00000570385 ALG1LQ6GMV1 187 aa8.51□□□□□ -1.05
CTDNEP1-203ENST00000570385 ARHGAP22Q7Z5H3 698 aa8.51□□□□□ -1.05
CTDNEP1-203ENST00000570385 SLC9B2Q86UD5 537 aa8.51□□□□□ -1.05
CTDNEP1-203ENST00000570385 CCDC13Q8IYE1 715 aa8.51□□□□□ -1.05
CTDNEP1-203ENST00000570385 NLGN4XQ8N0W4 816 aa8.51□□□□□ -1.05
CTDNEP1-203ENST00000570385 CNTD1Q8N815 330 aa8.51□□□□□ -1.05
CTDNEP1-203ENST00000570385 NLGN4YQ8NFZ3 816 aaPredicted RBP8.51□□□□□ -1.05
CTDNEP1-203ENST00000570385 CCHCR1Q8TD31 782 aa8.51□□□□□ -1.05
CTDNEP1-203ENST00000570385 SYN2Q92777 582 aaPredicted RBP8.51□□□□□ -1.05
CTDNEP1-203ENST00000570385 EID2BQ96D98 161 aa8.51□□□□□ -1.05
CTDNEP1-203ENST00000570385 ELMO2Q96JJ3 720 aa8.51□□□□□ -1.05
CTDNEP1-203ENST00000570385 PLEKHG4BQ96PX9 1271 aa8.51□□□□□ -1.05
CTDNEP1-203ENST00000570385 DPYSL5Q9BPU6 564 aa8.51□□□□□ -1.05
CTDNEP1-203ENST00000570385 ZNF670Q9BS34 389 aa8.51□□□□□ -1.05
CTDNEP1-203ENST00000570385 MLPHQ9BV36 600 aaPredicted RBP8.51□□□□□ -1.05
CTDNEP1-203ENST00000570385 SPATA16Q9BXB7 569 aa8.51□□□□□ -1.05
CTDNEP1-203ENST00000570385 STN1Q9H668 368 aaKnown RBP8.51□□□□□ -1.05
CTDNEP1-203ENST00000570385 KLC4Q9NSK0 619 aa8.51□□□□□ -1.05
CTDNEP1-203ENST00000570385 PKD2L2Q9NZM6 624 aa8.51□□□□□ -1.05
CTDNEP1-203ENST00000570385 SCHIP1Q9P0W5 487 aaPredicted RBP8.51□□□□□ -1.05
CTDNEP1-203ENST00000570385 VPS18Q9P253 973 aa8.51□□□□□ -1.05
CTDNEP1-203ENST00000570385 PDP2Q9P2J9 529 aa8.51□□□□□ -1.05
CTDNEP1-203ENST00000570385 CPNE7Q9UBL6 633 aa8.51□□□□□ -1.05
CTDNEP1-203ENST00000570385 TRIM10Q9UDY6 481 aa8.51□□□□□ -1.05
CTDNEP1-203ENST00000570385 SLC23A2Q9UGH3 650 aa8.51□□□□□ -1.05
CTDNEP1-203ENST00000570385 DNAJC16Q9Y2G8 782 aa8.51□□□□□ -1.05
CTDNEP1-203ENST00000570385 LUC7L2Q9Y383 392 aaKnown RBP8.51□□□□□ -1.05
CTDNEP1-203ENST00000570385 HEY1Q9Y5J3 304 aa8.51□□□□□ -1.05
CTDNEP1-203ENST00000570385 MRPS18BQ9Y676 258 aaKnown RBP8.51□□□□□ -1.05
CTDNEP1-203ENST00000570385 A0A1W2PQJ5 194 aa8.5□□□□□ -1.05
CTDNEP1-203ENST00000570385 SYCE3A1L190 88 aa8.5□□□□□ -1.05
CTDNEP1-203ENST00000570385 LRRD1A4D1F6 860 aa8.5□□□□□ -1.05
CTDNEP1-203ENST00000570385 A6NCN8 305 aa8.5□□□□□ -1.05
CTDNEP1-203ENST00000570385 ZNF891A8MT65 544 aaPredicted RBP8.5□□□□□ -1.05
CTDNEP1-203ENST00000570385 PDZK1P1A8MUH7 402 aa8.5□□□□□ -1.05
CTDNEP1-203ENST00000570385 POLR1CO15160 346 aaPredicted RBP8.5□□□□□ -1.05
CTDNEP1-203ENST00000570385 NUAK1O60285 661 aa8.5□□□□□ -1.05
CTDNEP1-203ENST00000570385 SLC25A14O95258 325 aaPredicted RBP8.5□□□□□ -1.05
CTDNEP1-203ENST00000570385 GYPCP04921 128 aa8.5□□□□□ -1.05
CTDNEP1-203ENST00000570385 F3P13726 295 aa8.5□□□□□ -1.05
CTDNEP1-203ENST00000570385 TNNT1P13805 278 aa8.5□□□□□ -1.05
CTDNEP1-203ENST00000570385 ZNF28P17035 718 aa8.5□□□□□ -1.05
CTDNEP1-203ENST00000570385 MX2P20592 715 aa8.5□□□□□ -1.05
CTDNEP1-203ENST00000570385 CES1P23141 567 aa8.5□□□□□ -1.05
CTDNEP1-203ENST00000570385 OAS2P29728 719 aaKnown RBP8.5□□□□□ -1.05
CTDNEP1-203ENST00000570385 RPL26P61254 145 aaKnown RBP8.5□□□□□ -1.05
CTDNEP1-203ENST00000570385 SH3BP2P78314 561 aa8.5□□□□□ -1.05
CTDNEP1-203ENST00000570385 AP1B1Q10567 949 aa8.5□□□□□ -1.05
CTDNEP1-203ENST00000570385 MESDQ14696 234 aa8.5□□□□□ -1.05
CTDNEP1-203ENST00000570385 PDK2Q15119 407 aa8.5□□□□□ -1.05
CTDNEP1-203ENST00000570385 WDR74Q6RFH5 385 aaPredicted RBP8.5□□□□□ -1.05
CTDNEP1-203ENST00000570385 NPNTQ6UXI9 565 aa8.5□□□□□ -1.05
CTDNEP1-203ENST00000570385 CEACAM20Q6UY09 585 aa8.5□□□□□ -1.05
CTDNEP1-203ENST00000570385 PHYKPLQ8IUZ5 450 aa8.5□□□□□ -1.05
CTDNEP1-203ENST00000570385 MAP7D3Q8IWC1 876 aa8.5□□□□□ -1.05
CTDNEP1-203ENST00000570385 GPR26Q8NDV2 337 aa8.5□□□□□ -1.05
CTDNEP1-203ENST00000570385 KIAA1143Q96AT1 154 aaPredicted RBP8.5□□□□□ -1.05
CTDNEP1-203ENST00000570385 SH3KBP1Q96B97 665 aa8.5□□□□□ -1.05
CTDNEP1-203ENST00000570385 SLC45A3Q96JT2 553 aa8.5□□□□□ -1.05
CTDNEP1-203ENST00000570385 AGAP3Q96P47 875 aa8.5□□□□□ -1.05
CTDNEP1-203ENST00000570385 TGM7Q96PF1 710 aa8.5□□□□□ -1.05
CTDNEP1-203ENST00000570385 RNF157Q96PX1 679 aa8.5□□□□□ -1.05
CTDNEP1-203ENST00000570385 LYSMD1Q96S90 227 aa8.5□□□□□ -1.05
CTDNEP1-203ENST00000570385 HERPUD2Q9BSE4 406 aa8.5□□□□□ -1.05
CTDNEP1-203ENST00000570385 SPRY4Q9C004 299 aa8.5□□□□□ -1.05
CTDNEP1-203ENST00000570385 EPN3Q9H201 632 aa8.5□□□□□ -1.05
CTDNEP1-203ENST00000570385 ZFYVE1Q9HBF4 777 aa8.5□□□□□ -1.05
CTDNEP1-203ENST00000570385 BPIFA1Q9NP55 256 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms