RNA–Protein interactions for RNA: ENST00000568095.5

LINC01541-202, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 1 (best) BASIC

Gene LINC01541, Length 3,105 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-202ENST00000568095 ZNF566Q969W8 418 aa5.43□□□□□ -1.54
LINC01541-202ENST00000568095 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.43□□□□□ -1.54
LINC01541-202ENST00000568095 CLIP3Q96DZ5 547 aa5.43□□□□□ -1.54
LINC01541-202ENST00000568095 YIPF6Q96EC8 236 aa5.43□□□□□ -1.54
LINC01541-202ENST00000568095 VPS39Q96JC1 886 aa5.43□□□□□ -1.54
LINC01541-202ENST00000568095 MUS81Q96NY9 551 aa5.43□□□□□ -1.54
LINC01541-202ENST00000568095 CSPG4P5Q96PW8 444 aa5.43□□□□□ -1.54
LINC01541-202ENST00000568095 GDF15Q99988 308 aa5.43□□□□□ -1.54
LINC01541-202ENST00000568095 OSBPL10Q9BXB5 764 aa5.43□□□□□ -1.54
LINC01541-202ENST00000568095 CXCL16Q9H2A7 254 aa5.43□□□□□ -1.54
LINC01541-202ENST00000568095 DHX35Q9H5Z1 703 aaKnown RBP5.43□□□□□ -1.54
LINC01541-202ENST00000568095 C12orf49Q9H741 205 aa5.43□□□□□ -1.54
LINC01541-202ENST00000568095 NTN4Q9HB63 628 aa5.43□□□□□ -1.54
LINC01541-202ENST00000568095 GPATCH2LQ9NWQ4 482 aa5.43□□□□□ -1.54
LINC01541-202ENST00000568095 CMTM6Q9NX76 183 aa5.43□□□□□ -1.54
LINC01541-202ENST00000568095 RCOR3Q9P2K3 495 aaPredicted RBP5.43□□□□□ -1.54
LINC01541-202ENST00000568095 SIX4Q9UIU6 781 aa5.43□□□□□ -1.54
LINC01541-202ENST00000568095 EIF3LQ9Y262 564 aaKnown RBP5.43□□□□□ -1.54
LINC01541-202ENST00000568095 ATP11BQ9Y2G3 1177 aa5.43□□□□□ -1.54
LINC01541-202ENST00000568095 E2F8A0AVK6 867 aa5.42□□□□□ -1.54
LINC01541-202ENST00000568095 C3orf80F5H4A9 247 aa5.42□□□□□ -1.54
LINC01541-202ENST00000568095 PSMD11O00231 422 aa5.42□□□□□ -1.54
LINC01541-202ENST00000568095 B4GAT1O43505 415 aa5.42□□□□□ -1.54
LINC01541-202ENST00000568095 GPC4O75487 556 aa5.42□□□□□ -1.54
LINC01541-202ENST00000568095 KCNK2O95069 426 aa5.42□□□□□ -1.54
LINC01541-202ENST00000568095 ALX3O95076 343 aa5.42□□□□□ -1.54
LINC01541-202ENST00000568095 MAP3K6O95382 1288 aa5.42□□□□□ -1.54
LINC01541-202ENST00000568095 NDST3O95803 873 aa5.42□□□□□ -1.54
LINC01541-202ENST00000568095 VDRP11473 427 aa5.42□□□□□ -1.54
LINC01541-202ENST00000568095 EIF2DP41214 584 aaKnown RBP5.42□□□□□ -1.54
LINC01541-202ENST00000568095 PPP5CP53041 499 aa5.42□□□□□ -1.54
LINC01541-202ENST00000568095 CDC42EP1Q00587 391 aa5.42□□□□□ -1.54
LINC01541-202ENST00000568095 C19orf57Q0VDD7 668 aa5.42□□□□□ -1.54
LINC01541-202ENST00000568095 BFSP2Q13515 415 aa5.42□□□□□ -1.54
LINC01541-202ENST00000568095 GEN1Q17RS7 908 aa5.42□□□□□ -1.54
LINC01541-202ENST00000568095 PGS1Q32NB8 556 aa5.42□□□□□ -1.54
LINC01541-202ENST00000568095 ALKBH2Q6NS38 261 aa5.42□□□□□ -1.54
LINC01541-202ENST00000568095 CASC4Q6P4E1 433 aa5.42□□□□□ -1.54
LINC01541-202ENST00000568095 TUBA3EQ6PEY2 450 aa5.42□□□□□ -1.54
LINC01541-202ENST00000568095 LCLAT1Q6UWP7 414 aa5.42□□□□□ -1.54
LINC01541-202ENST00000568095 SLC26A9Q7LBE3 791 aa5.42□□□□□ -1.54
LINC01541-202ENST00000568095 SLC22A16Q86VW1 577 aa5.42□□□□□ -1.54
LINC01541-202ENST00000568095 ZBTB8OSQ8IWT0 167 aa5.42□□□□□ -1.54
LINC01541-202ENST00000568095 PEX5LQ8IYB4 626 aa5.42□□□□□ -1.54
LINC01541-202ENST00000568095 LSM14AQ8ND56 463 aaKnown RBP5.42□□□□□ -1.54
LINC01541-202ENST00000568095 PJA1Q8NG27 643 aa5.42□□□□□ -1.54
LINC01541-202ENST00000568095 ANGPTL6Q8NI99 470 aa5.42□□□□□ -1.54
LINC01541-202ENST00000568095 HCAR2Q8TDS4 363 aa5.42□□□□□ -1.54
LINC01541-202ENST00000568095 AURKBQ96GD4 344 aaPredicted RBP5.42□□□□□ -1.54
LINC01541-202ENST00000568095 TMEM176AQ96HP8 235 aa5.42□□□□□ -1.54
LINC01541-202ENST00000568095 IL12RB2Q99665 862 aa5.42□□□□□ -1.54
LINC01541-202ENST00000568095 EMILIN2Q9BXX0 1053 aa5.42□□□□□ -1.54
LINC01541-202ENST00000568095 OR2B2Q9GZK3 357 aa5.42□□□□□ -1.54
LINC01541-202ENST00000568095 TRIT1Q9H3H1 467 aaKnown RBP5.42□□□□□ -1.54
LINC01541-202ENST00000568095 TASP1Q9H6P5 420 aa5.42□□□□□ -1.54
LINC01541-202ENST00000568095 TNFRSF12AQ9NP84 129 aa5.42□□□□□ -1.54
LINC01541-202ENST00000568095 NSMCE4AQ9NXX6 385 aa5.42□□□□□ -1.54
LINC01541-202ENST00000568095 SNTG2Q9NY99 539 aa5.42□□□□□ -1.54
LINC01541-202ENST00000568095 HMGXB4Q9UGU5 601 aa5.42□□□□□ -1.54
LINC01541-202ENST00000568095 FBXO9Q9UK97 447 aaPredicted RBP5.42□□□□□ -1.54
LINC01541-202ENST00000568095 CARD8Q9Y2G2 431 aa5.42□□□□□ -1.54
LINC01541-202ENST00000568095 PLXNA3P51805 1871 aa5.42□□□□□ -1.54
LINC01541-202ENST00000568095 RNF103-CHMP3A0A140T963 221 aa5.42□□□□□ -1.54
LINC01541-202ENST00000568095 C17orf102A2RUQ5 167 aa5.42□□□□□ -1.54
LINC01541-202ENST00000568095 NOTOA8MTQ0 251 aa5.42□□□□□ -1.54
LINC01541-202ENST00000568095 AURKAO14965 403 aa5.42□□□□□ -1.54
LINC01541-202ENST00000568095 ARPC2O15144 300 aa5.42□□□□□ -1.54
LINC01541-202ENST00000568095 INPPL1O15357 1258 aa5.42□□□□□ -1.54
LINC01541-202ENST00000568095 GMNNO75496 209 aa5.42□□□□□ -1.54
LINC01541-202ENST00000568095 RFPL2O75678 378 aa5.42□□□□□ -1.54
LINC01541-202ENST00000568095 UPK1BO75841 260 aa5.42□□□□□ -1.54
LINC01541-202ENST00000568095 MATN4O95460 622 aa5.42□□□□□ -1.54
LINC01541-202ENST00000568095 CHRNA1P02708 482 aa5.42□□□□□ -1.54
LINC01541-202ENST00000568095 ALPLP05186 524 aa5.42□□□□□ -1.54
LINC01541-202ENST00000568095 SLC6A2P23975 617 aa5.42□□□□□ -1.54
LINC01541-202ENST00000568095 CASP3P42574 277 aa5.42□□□□□ -1.54
LINC01541-202ENST00000568095 ALDH3A2P51648 485 aa5.42□□□□□ -1.54
LINC01541-202ENST00000568095 TKTL1P51854 596 aa5.42□□□□□ -1.54
LINC01541-202ENST00000568095 INCA1Q0VD86 236 aa5.42□□□□□ -1.54
LINC01541-202ENST00000568095 GRM3Q14832 879 aa5.42□□□□□ -1.54
LINC01541-202ENST00000568095 ACAP2Q15057 778 aa5.42□□□□□ -1.54
LINC01541-202ENST00000568095 ZNF181Q2M3W8 571 aa5.42□□□□□ -1.54
LINC01541-202ENST00000568095 SLC10A6Q3KNW5 377 aa5.42□□□□□ -1.54
LINC01541-202ENST00000568095 ADPRMQ3LIE5 342 aa5.42□□□□□ -1.54
LINC01541-202ENST00000568095 UGT3A2Q3SY77 523 aa5.42□□□□□ -1.54
LINC01541-202ENST00000568095 LDLRAP1Q5SW96 308 aa5.42□□□□□ -1.54
LINC01541-202ENST00000568095 SIGIRRQ6IA17 410 aa5.42□□□□□ -1.54
LINC01541-202ENST00000568095 R3HCC1LQ7Z5L2 792 aaKnown RBP5.42□□□□□ -1.54
LINC01541-202ENST00000568095 SLCO6A1Q86UG4 719 aa5.42□□□□□ -1.54
LINC01541-202ENST00000568095 LYSMD2Q8IV50 215 aa5.42□□□□□ -1.54
LINC01541-202ENST00000568095 DNAJC5GQ8N7S2 189 aa5.42□□□□□ -1.54
LINC01541-202ENST00000568095 TXNDC5Q8NBS9 432 aaKnown RBP5.42□□□□□ -1.54
LINC01541-202ENST00000568095 CHDHQ8NE62 594 aaPredicted RBP5.42□□□□□ -1.54
LINC01541-202ENST00000568095 BHMTQ93088 406 aa5.42□□□□□ -1.54
LINC01541-202ENST00000568095 LRCH3Q96II8 777 aa5.42□□□□□ -1.54
LINC01541-202ENST00000568095 ZNF300Q96RE9 604 aaPredicted RBP5.42□□□□□ -1.54
LINC01541-202ENST00000568095 SNX18Q96RF0 628 aa5.42□□□□□ -1.54
LINC01541-202ENST00000568095 KCTD15Q96SI1 283 aaPredicted RBP5.42□□□□□ -1.54
LINC01541-202ENST00000568095 SLC30A3Q99726 388 aa5.42□□□□□ -1.54
LINC01541-202ENST00000568095 FEM1AQ9BSK4 669 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms