RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 WT1P19544 449 aaPredicted RBP18.33■□□□□ 0.52
CLN6-204ENST00000564752 FECHP22830 423 aa18.33■□□□□ 0.52
CLN6-204ENST00000564752 FASLGP48023 281 aa18.33■□□□□ 0.52
CLN6-204ENST00000564752 ARSDP51689 593 aa18.33■□□□□ 0.52
CLN6-204ENST00000564752 GPLD1P80108 840 aa18.33■□□□□ 0.52
CLN6-204ENST00000564752 BZW1Q7L1Q6 419 aaKnown RBP18.33■□□□□ 0.52
CLN6-204ENST00000564752 DAAM2Q86T65 1068 aa18.33■□□□□ 0.52
CLN6-204ENST00000564752 CCDC50Q8IVM0 306 aa18.33■□□□□ 0.52
CLN6-204ENST00000564752 KATNAL2Q8IYT4 538 aa18.33■□□□□ 0.52
CLN6-204ENST00000564752 SFRP1Q8N474 314 aa18.33■□□□□ 0.52
CLN6-204ENST00000564752 AGBL5Q8NDL9 886 aa18.33■□□□□ 0.52
CLN6-204ENST00000564752 EXTL1Q92935 676 aa18.33■□□□□ 0.52
CLN6-204ENST00000564752 AGAP3Q96P47 875 aa18.33■□□□□ 0.52
CLN6-204ENST00000564752 VPS18Q9P253 973 aa18.33■□□□□ 0.52
CLN6-204ENST00000564752 ZNHIT2Q9UHR6 403 aa18.33■□□□□ 0.52
CLN6-204ENST00000564752 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.33■□□□□ 0.52
CLN6-204ENST00000564752 PCDHGA4Q9Y5G9 962 aa18.33■□□□□ 0.52
CLN6-204ENST00000564752 PCYT1BQ9Y5K3 369 aaPredicted RBP18.33■□□□□ 0.52
CLN6-204ENST00000564752 STMND1H3BQB6 276 aa18.32■□□□□ 0.52
CLN6-204ENST00000564752 CST8O60676 142 aa18.32■□□□□ 0.52
CLN6-204ENST00000564752 ASMTLO95671 621 aa18.32■□□□□ 0.52
CLN6-204ENST00000564752 MMP2P08253 660 aa18.32■□□□□ 0.52
CLN6-204ENST00000564752 THRAP10827 490 aa18.32■□□□□ 0.52
CLN6-204ENST00000564752 MPSTP25325 297 aa18.32■□□□□ 0.52
CLN6-204ENST00000564752 CSF2RBP32927 897 aa18.32■□□□□ 0.52
CLN6-204ENST00000564752 MARCKSL1P49006 195 aa18.32■□□□□ 0.52
CLN6-204ENST00000564752 NR2C2P49116 596 aa18.32■□□□□ 0.52
CLN6-204ENST00000564752 SPINT3P49223 89 aa18.32■□□□□ 0.52
CLN6-204ENST00000564752 LLGL1Q15334 1064 aa18.32■□□□□ 0.52
CLN6-204ENST00000564752 TAZQ16635 292 aa18.32■□□□□ 0.52
CLN6-204ENST00000564752 TFDP3Q5H9I0 405 aa18.32■□□□□ 0.52
CLN6-204ENST00000564752 TMEM71Q6P5X7 295 aa18.32■□□□□ 0.52
CLN6-204ENST00000564752 ZSCAN1Q8NBB4 408 aa18.32■□□□□ 0.52
CLN6-204ENST00000564752 SLC37A2Q8TED4 501 aa18.32■□□□□ 0.52
CLN6-204ENST00000564752 RBM41Q96IZ5 413 aaKnown RBP18.32■□□□□ 0.52
CLN6-204ENST00000564752 ADGRE3Q9BY15 652 aa18.32■□□□□ 0.52
CLN6-204ENST00000564752 FAM83DQ9H4H8 585 aa18.32■□□□□ 0.52
CLN6-204ENST00000564752 TMEM9Q9P0T7 183 aa18.32■□□□□ 0.52
CLN6-204ENST00000564752 PDP2Q9P2J9 529 aa18.32■□□□□ 0.52
CLN6-204ENST00000564752 OAS3Q9Y6K5 1087 aaKnown RBP18.32■□□□□ 0.52
CLN6-204ENST00000564752 C1orf232A0A0U1RR37 186 aa18.31■□□□□ 0.52
CLN6-204ENST00000564752 RGSL1A5PLK6 1076 aa18.31■□□□□ 0.52
CLN6-204ENST00000564752 ANKRD66B4E2M5 251 aa18.31■□□□□ 0.52
CLN6-204ENST00000564752 ZRANB2O95218 330 aaKnown RBP eCLIP18.31■□□□□ 0.52
CLN6-204ENST00000564752 EML2O95834 649 aa18.31■□□□□ 0.52
CLN6-204ENST00000564752 ATP1A1P05023 1023 aaKnown RBP18.31■□□□□ 0.52
CLN6-204ENST00000564752 PECAM1P16284 738 aaPredicted RBP18.31■□□□□ 0.52
CLN6-204ENST00000564752 CSTF2P33240 577 aaKnown RBP eCLIP18.31■□□□□ 0.52
CLN6-204ENST00000564752 PRKD1Q15139 912 aaPredicted RBP18.31■□□□□ 0.52
CLN6-204ENST00000564752 QPCTQ16769 361 aa18.31■□□□□ 0.52
CLN6-204ENST00000564752 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.31■□□□□ 0.52
CLN6-204ENST00000564752 HENMT1Q5T8I9 393 aaKnown RBP18.31■□□□□ 0.52
CLN6-204ENST00000564752 B4GALNT4Q76KP1 1039 aa18.31■□□□□ 0.52
CLN6-204ENST00000564752 NT5DC3Q86UY8 548 aa18.31■□□□□ 0.52
CLN6-204ENST00000564752 TFB1MQ8WVM0 346 aaKnown RBP18.31■□□□□ 0.52
CLN6-204ENST00000564752 PMEPA1Q969W9 287 aa18.31■□□□□ 0.52
CLN6-204ENST00000564752 SLC38A3Q99624 504 aa18.31■□□□□ 0.52
CLN6-204ENST00000564752 ARHGAP9Q9BRR9 750 aa18.31■□□□□ 0.52
CLN6-204ENST00000564752 MLPHQ9BV36 600 aaPredicted RBP18.31■□□□□ 0.52
CLN6-204ENST00000564752 SAE1Q9UBE0 346 aaPredicted RBP18.31■□□□□ 0.52
CLN6-204ENST00000564752 PRKAB1Q9Y478 270 aa18.31■□□□□ 0.52
CLN6-204ENST00000564752 hCG_1818297A0A087WSY0 165 aa18.3■□□□□ 0.52
CLN6-204ENST00000564752 B4E171 279 aa18.3■□□□□ 0.52
CLN6-204ENST00000564752 PYCARD-AS1I3L0S3 204 aa18.3■□□□□ 0.52
CLN6-204ENST00000564752 TSPAN7P41732 249 aa18.3■□□□□ 0.52
CLN6-204ENST00000564752 NAP1L1P55209 391 aaKnown RBP18.3■□□□□ 0.52
CLN6-204ENST00000564752 GALNT3Q14435 633 aa18.3■□□□□ 0.52
CLN6-204ENST00000564752 TBR1Q16650 682 aa18.3■□□□□ 0.52
CLN6-204ENST00000564752 FAM182AQ5T1J6 154 aa18.3■□□□□ 0.52
CLN6-204ENST00000564752 IYDQ6PHW0 289 aa18.3■□□□□ 0.52
CLN6-204ENST00000564752 RAD9BQ6WBX8 426 aa18.3■□□□□ 0.52
CLN6-204ENST00000564752 CHST15Q7LFX5 561 aaPredicted RBP18.3■□□□□ 0.52
CLN6-204ENST00000564752 ZNF761Q86XN6 746 aaPredicted RBP18.3■□□□□ 0.52
CLN6-204ENST00000564752 RCOR2Q8IZ40 523 aa18.3■□□□□ 0.52
CLN6-204ENST00000564752 CCDC112Q8NEF3 446 aa18.3■□□□□ 0.52
CLN6-204ENST00000564752 CCHCR1Q8TD31 782 aa18.3■□□□□ 0.52
CLN6-204ENST00000564752 JPH3Q8WXH2 748 aaPredicted RBP18.3■□□□□ 0.52
CLN6-204ENST00000564752 KRT35Q92764 455 aa18.3■□□□□ 0.52
CLN6-204ENST00000564752 P3H4Q92791 437 aa18.3■□□□□ 0.52
CLN6-204ENST00000564752 ART4Q93070 314 aa18.3■□□□□ 0.52
CLN6-204ENST00000564752 NKD1Q969G9 470 aa18.3■□□□□ 0.52
CLN6-204ENST00000564752 IMP4Q96G21 291 aaKnown RBP18.3■□□□□ 0.52
CLN6-204ENST00000564752 AHCYL2Q96HN2 611 aaKnown RBP18.3■□□□□ 0.52
CLN6-204ENST00000564752 CALR3Q96L12 384 aaKnown RBP18.3■□□□□ 0.52
CLN6-204ENST00000564752 DDA1Q9BW61 102 aa18.3■□□□□ 0.52
CLN6-204ENST00000564752 SLC25A51Q9H1U9 297 aa18.3■□□□□ 0.52
CLN6-204ENST00000564752 RMI1Q9H9A7 625 aa18.3■□□□□ 0.52
CLN6-204ENST00000564752 OCIAD1Q9NX40 245 aa18.3■□□□□ 0.52
CLN6-204ENST00000564752 PKD2L2Q9NZM6 624 aa18.3■□□□□ 0.52
CLN6-204ENST00000564752 TBC1D29Q9UFV1 150 aa18.3■□□□□ 0.52
CLN6-204ENST00000564752 B3GALT1Q9Y5Z6 326 aa18.3■□□□□ 0.52
CLN6-204ENST00000564752 MYO18BQ8IUG5 2567 aa18.3■□□□□ 0.52
CLN6-204ENST00000564752 RCCD1A6NED2 376 aa18.29■□□□□ 0.52
CLN6-204ENST00000564752 FADS2P1A8MWK0 482 aa18.29■□□□□ 0.52
CLN6-204ENST00000564752 ITGB6P18564 788 aa18.29■□□□□ 0.52
CLN6-204ENST00000564752 PTPN3P26045 913 aa18.29■□□□□ 0.52
CLN6-204ENST00000564752 CYP4F2P78329 520 aa18.29■□□□□ 0.52
CLN6-204ENST00000564752 PCSK7Q16549 785 aa18.29■□□□□ 0.52
CLN6-204ENST00000564752 TEX44Q53QW1 395 aa18.29■□□□□ 0.52
CLN6-204ENST00000564752 WDR74Q6RFH5 385 aaPredicted RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms