RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 NT5C1AQ9BXI3 368 aa10.44□□□□□ -0.74
HDGFL3-204ENST00000563790 OSBPL1AQ9BXW6 950 aa10.44□□□□□ -0.74
HDGFL3-204ENST00000563790 LHPPQ9H008 270 aa10.44□□□□□ -0.74
HDGFL3-204ENST00000563790 SEMA5BQ9P283 1151 aa10.44□□□□□ -0.74
HDGFL3-204ENST00000563790 NOTCH3Q9UM47 2321 aa10.44□□□□□ -0.74
HDGFL3-204ENST00000563790 A0A087X1B8 175 aa10.43□□□□□ -0.74
HDGFL3-204ENST00000563790 DYTNA2CJ06 578 aa10.43□□□□□ -0.74
HDGFL3-204ENST00000563790 KLHL18O94889 574 aa10.43□□□□□ -0.74
HDGFL3-204ENST00000563790 JCHAINP01591 159 aa10.43□□□□□ -0.74
HDGFL3-204ENST00000563790 PVRP15151 417 aa10.43□□□□□ -0.74
HDGFL3-204ENST00000563790 DNA2P51530 1060 aa10.43□□□□□ -0.74
HDGFL3-204ENST00000563790 ELP6Q0PNE2 266 aa10.43□□□□□ -0.74
HDGFL3-204ENST00000563790 ADIGQ0VDE8 80 aa10.43□□□□□ -0.74
HDGFL3-204ENST00000563790 IL17AQ16552 155 aa10.43□□□□□ -0.74
HDGFL3-204ENST00000563790 FGD2Q7Z6J4 655 aa10.43□□□□□ -0.74
HDGFL3-204ENST00000563790 CHERPQ8IWX8 916 aaKnown RBP10.43□□□□□ -0.74
HDGFL3-204ENST00000563790 SCML4Q8N228 414 aa10.43□□□□□ -0.74
HDGFL3-204ENST00000563790 FAM222BQ8WU58 562 aa10.43□□□□□ -0.74
HDGFL3-204ENST00000563790 SERPINB11Q96P15 392 aa10.43□□□□□ -0.74
HDGFL3-204ENST00000563790 PLIN2Q99541 437 aa10.43□□□□□ -0.74
HDGFL3-204ENST00000563790 FRMD8Q9BZ67 464 aaPredicted RBP10.43□□□□□ -0.74
HDGFL3-204ENST00000563790 SLC6A20Q9NP91 592 aa10.43□□□□□ -0.74
HDGFL3-204ENST00000563790 SEPT11Q9NVA2 429 aaKnown RBP10.43□□□□□ -0.74
HDGFL3-204ENST00000563790 RAI1Q7Z5J4 1906 aaPredicted RBP10.43□□□□□ -0.74
HDGFL3-204ENST00000563790 C17orf113A0A1B0GUU1 675 aa10.42□□□□□ -0.74
HDGFL3-204ENST00000563790 A8MV72 311 aaPredicted RBP10.42□□□□□ -0.74
HDGFL3-204ENST00000563790 C9J4A7 227 aa10.42□□□□□ -0.74
HDGFL3-204ENST00000563790 EBLN1P0CF75 366 aa10.42□□□□□ -0.74
HDGFL3-204ENST00000563790 PEX19P40855 299 aa10.42□□□□□ -0.74
HDGFL3-204ENST00000563790 SERPINH1P50454 418 aaKnown RBP10.42□□□□□ -0.74
HDGFL3-204ENST00000563790 IRAK1P51617 712 aa10.42□□□□□ -0.74
HDGFL3-204ENST00000563790 OTUD1Q5VV17 481 aaPredicted RBP10.42□□□□□ -0.74
HDGFL3-204ENST00000563790 FBXW10Q5XX13 1052 aa10.42□□□□□ -0.74
HDGFL3-204ENST00000563790 TMEM211Q6ICI0 200 aa10.42□□□□□ -0.74
HDGFL3-204ENST00000563790 USP45Q70EL2 814 aa10.42□□□□□ -0.74
HDGFL3-204ENST00000563790 SLC9B2Q86UD5 537 aa10.42□□□□□ -0.74
HDGFL3-204ENST00000563790 CCDC71Q8IV32 467 aaPredicted RBP10.42□□□□□ -0.74
HDGFL3-204ENST00000563790 OR6K2Q8NGY2 324 aa10.42□□□□□ -0.74
HDGFL3-204ENST00000563790 OR8K5Q8NH50 307 aa10.42□□□□□ -0.74
HDGFL3-204ENST00000563790 RND1Q92730 232 aa10.42□□□□□ -0.74
HDGFL3-204ENST00000563790 DNAJB6O75190 326 aa10.41□□□□□ -0.74
HDGFL3-204ENST00000563790 CLDN11O75508 207 aa10.41□□□□□ -0.74
HDGFL3-204ENST00000563790 UBXN7O94888 489 aa10.41□□□□□ -0.74
HDGFL3-204ENST00000563790 CLSTN1O94985 981 aa10.41□□□□□ -0.74
HDGFL3-204ENST00000563790 MLYCDO95822 493 aa10.41□□□□□ -0.74
HDGFL3-204ENST00000563790 APOEP02649 317 aa10.41□□□□□ -0.74
HDGFL3-204ENST00000563790 IVLP07476 585 aa10.41□□□□□ -0.74
HDGFL3-204ENST00000563790 ASPAP45381 313 aa10.41□□□□□ -0.74
HDGFL3-204ENST00000563790 LIG3P49916 1009 aa10.41□□□□□ -0.74
HDGFL3-204ENST00000563790 TOB1P50616 345 aaPredicted RBP10.41□□□□□ -0.74
HDGFL3-204ENST00000563790 SUOXP51687 545 aa10.41□□□□□ -0.74
HDGFL3-204ENST00000563790 DAOAP59103 153 aa10.41□□□□□ -0.74
HDGFL3-204ENST00000563790 ANAPC15P60006 121 aa10.41□□□□□ -0.74
HDGFL3-204ENST00000563790 TUBB4BP68371 445 aa10.41□□□□□ -0.74
HDGFL3-204ENST00000563790 PMP22Q01453 160 aa10.41□□□□□ -0.74
HDGFL3-204ENST00000563790 SNTB1Q13884 538 aaKnown RBP10.41□□□□□ -0.74
HDGFL3-204ENST00000563790 TUBB2AQ13885 445 aa10.41□□□□□ -0.74
HDGFL3-204ENST00000563790 PSMD6Q15008 389 aa10.41□□□□□ -0.74
HDGFL3-204ENST00000563790 FILIP1LQ4L180 1135 aa10.41□□□□□ -0.74
HDGFL3-204ENST00000563790 TMEM119Q4V9L6 283 aa10.41□□□□□ -0.74
HDGFL3-204ENST00000563790 IYDQ6PHW0 289 aa10.41□□□□□ -0.74
HDGFL3-204ENST00000563790 SYCP3Q8IZU3 236 aa10.41□□□□□ -0.74
HDGFL3-204ENST00000563790 HAS2Q92819 552 aa10.41□□□□□ -0.74
HDGFL3-204ENST00000563790 PIGTQ969N2 578 aa10.41□□□□□ -0.74
HDGFL3-204ENST00000563790 DPH2Q9BQC3 489 aaPredicted RBP10.41□□□□□ -0.74
HDGFL3-204ENST00000563790 TUBB2BQ9BVA1 445 aa10.41□□□□□ -0.74
HDGFL3-204ENST00000563790 TM6SF2Q9BZW4 377 aa10.41□□□□□ -0.74
HDGFL3-204ENST00000563790 UCK1Q9HA47 277 aa10.41□□□□□ -0.74
HDGFL3-204ENST00000563790 LRRC4Q9HBW1 653 aa10.41□□□□□ -0.74
HDGFL3-204ENST00000563790 KCND1Q9NSA2 647 aa10.41□□□□□ -0.74
HDGFL3-204ENST00000563790 PCMTD2Q9NV79 361 aa10.41□□□□□ -0.74
HDGFL3-204ENST00000563790 IGHV5-51A0A0C4DH38 117 aa10.4□□□□□ -0.74
HDGFL3-204ENST00000563790 MBD3L4A6NDZ8 208 aaPredicted RBP10.4□□□□□ -0.74
HDGFL3-204ENST00000563790 MBD3L5A6NJ08 208 aaPredicted RBP10.4□□□□□ -0.74
HDGFL3-204ENST00000563790 KDM4EB2RXH2 506 aaPredicted RBP10.4□□□□□ -0.74
HDGFL3-204ENST00000563790 TULP2O00295 520 aa10.4□□□□□ -0.74
HDGFL3-204ENST00000563790 ALOX12BO75342 701 aa10.4□□□□□ -0.74
HDGFL3-204ENST00000563790 KRT18P05783 430 aaKnown RBP10.4□□□□□ -0.74
HDGFL3-204ENST00000563790 ZNF30P17039 623 aa10.4□□□□□ -0.74
HDGFL3-204ENST00000563790 FOLR3P41439 243 aa10.4□□□□□ -0.74
HDGFL3-204ENST00000563790 SLC8A3P57103 927 aa10.4□□□□□ -0.74
HDGFL3-204ENST00000563790 GUCY1B3Q02153 619 aa10.4□□□□□ -0.74
HDGFL3-204ENST00000563790 SLC20A2Q08357 652 aa10.4□□□□□ -0.74
HDGFL3-204ENST00000563790 NCOA4Q13772 614 aa10.4□□□□□ -0.74
HDGFL3-204ENST00000563790 CAPRIN1Q14444 709 aaKnown RBP10.4□□□□□ -0.74
HDGFL3-204ENST00000563790 LIPNQ5VXI9 398 aa10.4□□□□□ -0.74
HDGFL3-204ENST00000563790 FBXL22Q6P050 247 aa10.4□□□□□ -0.74
HDGFL3-204ENST00000563790 FAM92BQ6ZTR7 304 aa10.4□□□□□ -0.74
HDGFL3-204ENST00000563790 GUF1Q8N442 669 aaKnown RBP10.4□□□□□ -0.74
HDGFL3-204ENST00000563790 OR2Y1Q8NGV0 311 aa10.4□□□□□ -0.74
HDGFL3-204ENST00000563790 DQX1Q8TE96 717 aaKnown RBP10.4□□□□□ -0.74
HDGFL3-204ENST00000563790 UBXN4Q92575 508 aa10.4□□□□□ -0.74
HDGFL3-204ENST00000563790 ISG20Q96AZ6 181 aaKnown RBP10.4□□□□□ -0.74
HDGFL3-204ENST00000563790 CLIP3Q96DZ5 547 aa10.4□□□□□ -0.74
HDGFL3-204ENST00000563790 SEC16BQ96JE7 1060 aa10.4□□□□□ -0.74
HDGFL3-204ENST00000563790 PCMTD1Q96MG8 357 aaPredicted RBP10.4□□□□□ -0.74
HDGFL3-204ENST00000563790 RPRD1AQ96P16 312 aaPredicted RBP10.4□□□□□ -0.74
HDGFL3-204ENST00000563790 ZNF696Q9H7X3 374 aa10.4□□□□□ -0.74
HDGFL3-204ENST00000563790 KIAA1586Q9HCI6 787 aa10.4□□□□□ -0.74
HDGFL3-204ENST00000563790 CNGB3Q9NQW8 809 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms