RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 RIOK2Q9BVS4 552 aaKnown RBP21.79■■□□□ 1.08
LINC01960-201ENST00000563759 ARHGEF3Q9NR81 526 aa21.79■■□□□ 1.08
LINC01960-201ENST00000563759 COQ6Q9Y2Z9 468 aa21.79■■□□□ 1.08
LINC01960-201ENST00000563759 AGAP14A8MT82 685 aa21.78■■□□□ 1.08
LINC01960-201ENST00000563759 RHOBTB1O94844 696 aa21.78■■□□□ 1.08
LINC01960-201ENST00000563759 ESR1P03372 595 aa21.78■■□□□ 1.08
LINC01960-201ENST00000563759 PKMP14618 531 aaKnown RBP21.78■■□□□ 1.08
LINC01960-201ENST00000563759 CA5AP35218 305 aa21.78■■□□□ 1.08
LINC01960-201ENST00000563759 ETV4P43268 484 aa21.78■■□□□ 1.08
LINC01960-201ENST00000563759 PDAP1Q13442 181 aaKnown RBP21.78■■□□□ 1.08
LINC01960-201ENST00000563759 TMEM52BQ4KMG9 183 aa21.78■■□□□ 1.08
LINC01960-201ENST00000563759 NRSN1Q8IZ57 195 aa21.78■■□□□ 1.08
LINC01960-201ENST00000563759 PLD6Q8N2A8 252 aaKnown RBP21.78■■□□□ 1.08
LINC01960-201ENST00000563759 ARMC2Q8NEN0 867 aa21.78■■□□□ 1.08
LINC01960-201ENST00000563759 FAM136AQ96C01 138 aa21.78■■□□□ 1.08
LINC01960-201ENST00000563759 AP2M1Q96CW1 435 aa21.78■■□□□ 1.08
LINC01960-201ENST00000563759 DTD2Q96FN9 168 aa21.78■■□□□ 1.08
LINC01960-201ENST00000563759 COQ10AQ96MF6 247 aa21.78■■□□□ 1.08
LINC01960-201ENST00000563759 SLC6A17Q9H1V8 727 aa21.78■■□□□ 1.08
LINC01960-201ENST00000563759 TAS2R13Q9NYV9 303 aa21.78■■□□□ 1.08
LINC01960-201ENST00000563759 PCDHB1Q9Y5F3 818 aa21.78■■□□□ 1.08
LINC01960-201ENST00000563759 COMMD10Q9Y6G5 202 aa21.78■■□□□ 1.08
LINC01960-201ENST00000563759 LZTS3O60299 673 aaPredicted RBP21.77■■□□□ 1.08
LINC01960-201ENST00000563759 MMP20O60882 483 aa21.77■■□□□ 1.08
LINC01960-201ENST00000563759 DNAJC6O75061 913 aa21.77■■□□□ 1.08
LINC01960-201ENST00000563759 LCA5Q86VQ0 697 aa21.77■■□□□ 1.08
LINC01960-201ENST00000563759 RAVER1Q8IY67 606 aaKnown RBP21.77■■□□□ 1.08
LINC01960-201ENST00000563759 TRAM1L1Q8N609 369 aa21.77■■□□□ 1.08
LINC01960-201ENST00000563759 KCTD4Q8WVF5 259 aa21.77■■□□□ 1.08
LINC01960-201ENST00000563759 NUS1Q96E22 293 aa21.77■■□□□ 1.08
LINC01960-201ENST00000563759 BOCQ9BWV1 1114 aa21.77■■□□□ 1.08
LINC01960-201ENST00000563759 P2RY12Q9H244 342 aa21.77■■□□□ 1.08
LINC01960-201ENST00000563759 ZNF358Q9NW07 568 aa21.77■■□□□ 1.08
LINC01960-201ENST00000563759 SERGEFQ9UGK8 458 aa21.77■■□□□ 1.08
LINC01960-201ENST00000563759 E5RI56 91 aa21.77■■□□□ 1.08
LINC01960-201ENST00000563759 VPS26AO75436 327 aa21.77■■□□□ 1.08
LINC01960-201ENST00000563759 COL6A2P12110 1019 aa21.77■■□□□ 1.08
LINC01960-201ENST00000563759 GM2AP17900 193 aa21.77■■□□□ 1.08
LINC01960-201ENST00000563759 IRX4P78413 519 aa21.77■■□□□ 1.08
LINC01960-201ENST00000563759 GABPB1Q06547 395 aaPredicted RBP21.77■■□□□ 1.08
LINC01960-201ENST00000563759 ITIH4Q14624 930 aa21.77■■□□□ 1.08
LINC01960-201ENST00000563759 TTC31Q49AM3 519 aaPredicted RBP21.77■■□□□ 1.08
LINC01960-201ENST00000563759 CTSL3PQ5NE16 218 aa21.77■■□□□ 1.08
LINC01960-201ENST00000563759 C16orf46Q6P387 395 aa21.77■■□□□ 1.08
LINC01960-201ENST00000563759 CYP2U1Q7Z449 544 aa21.77■■□□□ 1.08
LINC01960-201ENST00000563759 CCDC91Q7Z6B0 441 aa21.77■■□□□ 1.08
LINC01960-201ENST00000563759 CENPLQ8N0S6 344 aaPredicted RBP21.77■■□□□ 1.08
LINC01960-201ENST00000563759 COPS8Q99627 209 aa21.77■■□□□ 1.08
LINC01960-201ENST00000563759 ABCG8Q9H221 673 aa21.77■■□□□ 1.08
LINC01960-201ENST00000563759 POPDC3Q9HBV1 291 aa21.77■■□□□ 1.08
LINC01960-201ENST00000563759 SMOXQ9NWM0 555 aa21.77■■□□□ 1.08
LINC01960-201ENST00000563759 FBXL12Q9NXK8 326 aa21.77■■□□□ 1.08
LINC01960-201ENST00000563759 ZDHHC3Q9NYG2 299 aa21.77■■□□□ 1.08
LINC01960-201ENST00000563759 PSD3Q9NYI0 1048 aa21.77■■□□□ 1.08
LINC01960-201ENST00000563759 TMEM216Q9P0N5 145 aa21.77■■□□□ 1.08
LINC01960-201ENST00000563759 CAMSAP3Q9P1Y5 1249 aaPredicted RBP21.77■■□□□ 1.08
LINC01960-201ENST00000563759 THEGQ9P2T0 379 aa21.77■■□□□ 1.08
LINC01960-201ENST00000563759 GNPTGQ9UJJ9 305 aa21.77■■□□□ 1.08
LINC01960-201ENST00000563759 FBXL21Q9UKT6 434 aa21.77■■□□□ 1.08
LINC01960-201ENST00000563759 MMP17Q9ULZ9 603 aa21.77■■□□□ 1.08
LINC01960-201ENST00000563759 TSPAN6O43657 245 aa21.76■■□□□ 1.07
LINC01960-201ENST00000563759 AP1G1O43747 822 aa21.76■■□□□ 1.07
LINC01960-201ENST00000563759 RECQL5O94762 991 aaPredicted RBP21.76■■□□□ 1.07
LINC01960-201ENST00000563759 PCDH8O95206 1070 aa21.76■■□□□ 1.07
LINC01960-201ENST00000563759 PRKCQQ04759 706 aa21.76■■□□□ 1.07
LINC01960-201ENST00000563759 CCDC153Q494R4 210 aa21.76■■□□□ 1.07
LINC01960-201ENST00000563759 SETMARQ53H47 684 aaPredicted RBP21.76■■□□□ 1.07
LINC01960-201ENST00000563759 PTRHD1Q6GMV3 140 aaKnown RBP21.76■■□□□ 1.07
LINC01960-201ENST00000563759 DTX3LQ8TDB6 740 aa21.76■■□□□ 1.07
LINC01960-201ENST00000563759 CKAP2Q8WWK9 683 aa21.76■■□□□ 1.07
LINC01960-201ENST00000563759 CCDC97Q96F63 343 aaPredicted RBP21.76■■□□□ 1.07
LINC01960-201ENST00000563759 EMCNQ9ULC0 261 aa21.76■■□□□ 1.07
LINC01960-201ENST00000563759 WDR91A4D1P6 747 aa21.75■■□□□ 1.07
LINC01960-201ENST00000563759 NIPSNAP2O75323 286 aa21.75■■□□□ 1.07
LINC01960-201ENST00000563759 PYGLP06737 847 aa21.75■■□□□ 1.07
LINC01960-201ENST00000563759 DHRS4L1P0CG22 281 aa21.75■■□□□ 1.07
LINC01960-201ENST00000563759 RPS3P23396 243 aaKnown RBP eCLIP21.75■■□□□ 1.07
LINC01960-201ENST00000563759 AKT1P31749 480 aa21.75■■□□□ 1.07
LINC01960-201ENST00000563759 SERPINB4P48594 390 aa21.75■■□□□ 1.07
LINC01960-201ENST00000563759 CSHL1Q14406 222 aa21.75■■□□□ 1.07
LINC01960-201ENST00000563759 TSNAXIP1Q2TAA8 658 aa21.75■■□□□ 1.07
LINC01960-201ENST00000563759 KCNJ9Q92806 393 aa21.75■■□□□ 1.07
LINC01960-201ENST00000563759 SIPA1Q96FS4 1042 aa21.75■■□□□ 1.07
LINC01960-201ENST00000563759 MAGEB18Q96M61 343 aa21.75■■□□□ 1.07
LINC01960-201ENST00000563759 C1QTNF1Q9BXJ1 281 aa21.75■■□□□ 1.07
LINC01960-201ENST00000563759 CCDC134Q9H6E4 229 aa21.75■■□□□ 1.07
LINC01960-201ENST00000563759 CD248Q9HCU0 757 aa21.75■■□□□ 1.07
LINC01960-201ENST00000563759 SCML1Q9UN30 329 aa21.75■■□□□ 1.07
LINC01960-201ENST00000563759 PLIN3O60664 434 aa21.75■■□□□ 1.07
LINC01960-201ENST00000563759 KLHL2O95198 593 aa21.75■■□□□ 1.07
LINC01960-201ENST00000563759 CCDC166P0CW27 439 aa21.75■■□□□ 1.07
LINC01960-201ENST00000563759 NSG1P42857 185 aa21.75■■□□□ 1.07
LINC01960-201ENST00000563759 GLRBP48167 497 aa21.75■■□□□ 1.07
LINC01960-201ENST00000563759 KPNA2P52292 529 aaKnown RBP21.75■■□□□ 1.07
LINC01960-201ENST00000563759 TAS2R38P59533 333 aa21.75■■□□□ 1.07
LINC01960-201ENST00000563759 GPRC6AQ5T6X5 926 aa21.75■■□□□ 1.07
LINC01960-201ENST00000563759 Q6ZS52 159 aa21.75■■□□□ 1.07
LINC01960-201ENST00000563759 SPATA6LQ8N4H0 392 aa21.75■■□□□ 1.07
LINC01960-201ENST00000563759 CLDN19Q8N6F1 224 aa21.75■■□□□ 1.07
LINC01960-201ENST00000563759 GPR21Q99679 349 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms