RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 ECI2O75521 394 aa13□□□□□ -0.33
USB1-207ENST00000563149 OR1E1P30953 314 aa13□□□□□ -0.33
USB1-207ENST00000563149 CAPGP40121 348 aa13□□□□□ -0.33
USB1-207ENST00000563149 EMP3P54852 163 aa13□□□□□ -0.33
USB1-207ENST00000563149 ADARP55265 1226 aaKnown RBP13□□□□□ -0.33
USB1-207ENST00000563149 ERVK-8P63133 956 aa13□□□□□ -0.33
USB1-207ENST00000563149 CAPRIN1Q14444 709 aaKnown RBP13□□□□□ -0.33
USB1-207ENST00000563149 LPIN1Q14693 890 aa13□□□□□ -0.33
USB1-207ENST00000563149 FXNQ16595 210 aa13□□□□□ -0.33
USB1-207ENST00000563149 DDR2Q16832 855 aa13□□□□□ -0.33
USB1-207ENST00000563149 CYP51A1Q16850 503 aa13□□□□□ -0.33
USB1-207ENST00000563149 C5orf22Q49AR2 442 aa13□□□□□ -0.33
USB1-207ENST00000563149 PAQR3Q6TCH7 311 aa13□□□□□ -0.33
USB1-207ENST00000563149 ABRAXAS1Q6UWZ7 409 aa13□□□□□ -0.33
USB1-207ENST00000563149 PATL1Q86TB9 770 aaKnown RBP13□□□□□ -0.33
USB1-207ENST00000563149 ZNF786Q8N393 782 aa13□□□□□ -0.33
USB1-207ENST00000563149 TMEM199Q8N511 208 aa13□□□□□ -0.33
USB1-207ENST00000563149 DHRSXQ8N5I4 330 aa13□□□□□ -0.33
USB1-207ENST00000563149 OR56A4Q8NGH8 313 aa13□□□□□ -0.33
USB1-207ENST00000563149 GRIN3AQ8TCU5 1115 aa13□□□□□ -0.33
USB1-207ENST00000563149 OSCP1Q8WVF1 389 aa13□□□□□ -0.33
USB1-207ENST00000563149 PLEKHG4BQ96PX9 1271 aa13□□□□□ -0.33
USB1-207ENST00000563149 KCNA7Q96RP8 456 aa13□□□□□ -0.33
USB1-207ENST00000563149 MARCH2Q9P0N8 246 aa13□□□□□ -0.33
USB1-207ENST00000563149 ZNF639Q9UID6 485 aa13□□□□□ -0.33
USB1-207ENST00000563149 BTRCQ9Y297 605 aa13□□□□□ -0.33
USB1-207ENST00000563149 PTGDR2Q9Y5Y4 395 aa13□□□□□ -0.33
USB1-207ENST00000563149 UBA6A0AVT1 1052 aaPredicted RBP12.99□□□□□ -0.33
USB1-207ENST00000563149 FAM234BA2RU67 622 aa12.99□□□□□ -0.33
USB1-207ENST00000563149 IFRD1O00458 451 aaPredicted RBP12.99□□□□□ -0.33
USB1-207ENST00000563149 GIPC1O14908 333 aa12.99□□□□□ -0.33
USB1-207ENST00000563149 INPP4BO15327 924 aa12.99□□□□□ -0.33
USB1-207ENST00000563149 CLOCKO15516 846 aa12.99□□□□□ -0.33
USB1-207ENST00000563149 SNX2O60749 519 aa12.99□□□□□ -0.33
USB1-207ENST00000563149 NDUFS3O75489 264 aa12.99□□□□□ -0.33
USB1-207ENST00000563149 SLC22A3O75751 556 aa12.99□□□□□ -0.33
USB1-207ENST00000563149 ENO2P09104 434 aaPredicted RBP12.99□□□□□ -0.33
USB1-207ENST00000563149 NELFEP18615 380 aaKnown RBP12.99□□□□□ -0.33
USB1-207ENST00000563149 CES1P23141 567 aa12.99□□□□□ -0.33
USB1-207ENST00000563149 ZFP36L2P47974 494 aaKnown RBP12.99□□□□□ -0.33
USB1-207ENST00000563149 ZNF140P52738 457 aaPredicted RBP12.99□□□□□ -0.33
USB1-207ENST00000563149 EMX2Q04743 252 aa12.99□□□□□ -0.33
USB1-207ENST00000563149 LIPEQ05469 1076 aa12.99□□□□□ -0.33
USB1-207ENST00000563149 GALNT3Q14435 633 aa12.99□□□□□ -0.33
USB1-207ENST00000563149 TAF1AQ15573 450 aaPredicted RBP12.99□□□□□ -0.33
USB1-207ENST00000563149 SETMARQ53H47 684 aaPredicted RBP12.99□□□□□ -0.33
USB1-207ENST00000563149 FAM26DQ5JW98 314 aa12.99□□□□□ -0.33
USB1-207ENST00000563149 GPR180Q86V85 440 aa12.99□□□□□ -0.33
USB1-207ENST00000563149 CHCHD4Q8N4Q1 142 aa12.99□□□□□ -0.33
USB1-207ENST00000563149 PNPT1Q8TCS8 783 aaKnown RBP12.99□□□□□ -0.33
USB1-207ENST00000563149 FBXO32Q969P5 355 aa12.99□□□□□ -0.33
USB1-207ENST00000563149 CNDP2Q96KP4 475 aaKnown RBP12.99□□□□□ -0.33
USB1-207ENST00000563149 MGME1Q9BQP7 344 aa12.99□□□□□ -0.33
USB1-207ENST00000563149 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.99□□□□□ -0.33
USB1-207ENST00000563149 MAGEH1Q9H213 219 aa12.99□□□□□ -0.33
USB1-207ENST00000563149 HIPK3Q9H422 1215 aa12.99□□□□□ -0.33
USB1-207ENST00000563149 PLGRKTQ9HBL7 147 aa12.99□□□□□ -0.33
USB1-207ENST00000563149 PREBQ9HCU5 417 aa12.99□□□□□ -0.33
USB1-207ENST00000563149 SEMA4BQ9NPR2 832 aaPredicted RBP12.99□□□□□ -0.33
USB1-207ENST00000563149 GALNT8Q9NY28 637 aa12.99□□□□□ -0.33
USB1-207ENST00000563149 SMPD3Q9NY59 655 aaPredicted RBP12.99□□□□□ -0.33
USB1-207ENST00000563149 GIMAP2Q9UG22 337 aa12.99□□□□□ -0.33
USB1-207ENST00000563149 SEPT3Q9UH03 358 aa12.99□□□□□ -0.33
USB1-207ENST00000563149 SUN2Q9UH99 717 aa12.99□□□□□ -0.33
USB1-207ENST00000563149 CDH7Q9ULB5 785 aa12.99□□□□□ -0.33
USB1-207ENST00000563149 COMMD10Q9Y6G5 202 aa12.99□□□□□ -0.33
USB1-207ENST00000563149 DOCK3Q8IZD9 2030 aa12.99□□□□□ -0.33
USB1-207ENST00000563149 A0A0J9YVX5 310 aa12.99□□□□□ -0.33
USB1-207ENST00000563149 SLC12A8A0AV02 714 aa12.99□□□□□ -0.33
USB1-207ENST00000563149 H0YAE9 185 aa12.99□□□□□ -0.33
USB1-207ENST00000563149 SYN3O14994 580 aa12.99□□□□□ -0.33
USB1-207ENST00000563149 MUSKO15146 869 aa12.99□□□□□ -0.33
USB1-207ENST00000563149 VPS26AO75436 327 aa12.99□□□□□ -0.33
USB1-207ENST00000563149 EOMESO95936 686 aa12.99□□□□□ -0.33
USB1-207ENST00000563149 LDLRP01130 860 aa12.99□□□□□ -0.33
USB1-207ENST00000563149 FMO4P31512 558 aa12.99□□□□□ -0.33
USB1-207ENST00000563149 ACVRL1P37023 503 aa12.99□□□□□ -0.33
USB1-207ENST00000563149 CLCN4P51793 760 aa12.99□□□□□ -0.33
USB1-207ENST00000563149 POLR2JP52435 117 aaKnown RBP12.99□□□□□ -0.33
USB1-207ENST00000563149 DIO3P55073 304 aa12.99□□□□□ -0.33
USB1-207ENST00000563149 CDH15P55291 814 aa12.99□□□□□ -0.33
USB1-207ENST00000563149 CACNB2Q08289 660 aaPredicted RBP12.99□□□□□ -0.33
USB1-207ENST00000563149 DSC1Q08554 894 aa12.99□□□□□ -0.33
USB1-207ENST00000563149 PTPRCAPQ14761 206 aa12.99□□□□□ -0.33
USB1-207ENST00000563149 SDHAF4Q5VUM1 108 aa12.99□□□□□ -0.33
USB1-207ENST00000563149 C17orf99Q6UX52 265 aa12.99□□□□□ -0.33
USB1-207ENST00000563149 FKBP9P1Q75LS8 142 aa12.99□□□□□ -0.33
USB1-207ENST00000563149 CLVS1Q8IUQ0 354 aaPredicted RBP12.99□□□□□ -0.33
USB1-207ENST00000563149 FAM110BQ8TC76 370 aa12.99□□□□□ -0.33
USB1-207ENST00000563149 FUBP1Q96AE4 644 aaKnown RBP12.99□□□□□ -0.33
USB1-207ENST00000563149 ISOC1Q96CN7 298 aa12.99□□□□□ -0.33
USB1-207ENST00000563149 DOK1Q99704 481 aa12.99□□□□□ -0.33
USB1-207ENST00000563149 BDH2Q9BUT1 245 aa12.99□□□□□ -0.33
USB1-207ENST00000563149 OSBPL6Q9BZF3 934 aa12.99□□□□□ -0.33
USB1-207ENST00000563149 ZFYVE28Q9HCC9 887 aa12.99□□□□□ -0.33
USB1-207ENST00000563149 PKD2L2Q9NZM6 624 aa12.99□□□□□ -0.33
USB1-207ENST00000563149 ZNHIT2Q9UHR6 403 aa12.99□□□□□ -0.33
USB1-207ENST00000563149 PCTPQ9UKL6 214 aa12.99□□□□□ -0.33
USB1-207ENST00000563149 OAZ3Q9UMX2 235 aa12.99□□□□□ -0.33
USB1-207ENST00000563149 FADS3Q9Y5Q0 445 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms