RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 SDK1Q7Z5N4 2213 aa18.66■□□□□ 0.58
RAB40C-207ENST00000563109 PCDH15Q96QU1 1955 aa18.66■□□□□ 0.58
RAB40C-207ENST00000563109 TMEM131Q92545 1883 aa18.65■□□□□ 0.58
RAB40C-207ENST00000563109 OR51F1A6NGY5 319 aa18.65■□□□□ 0.58
RAB40C-207ENST00000563109 GPR39O43194 453 aa18.65■□□□□ 0.58
RAB40C-207ENST00000563109 CER1O95813 267 aa18.65■□□□□ 0.58
RAB40C-207ENST00000563109 ZNF806P0C7X5 589 aa18.65■□□□□ 0.58
RAB40C-207ENST00000563109 FOXN2P32314 431 aa18.65■□□□□ 0.58
RAB40C-207ENST00000563109 PPARGP37231 505 aaPredicted RBP18.65■□□□□ 0.58
RAB40C-207ENST00000563109 CTSKP43235 329 aa18.65■□□□□ 0.58
RAB40C-207ENST00000563109 ATXN3P54252 364 aaPredicted RBP18.65■□□□□ 0.58
RAB40C-207ENST00000563109 FASTKD3Q14CZ7 662 aaKnown RBP18.65■□□□□ 0.58
RAB40C-207ENST00000563109 LYPLAL1Q5VWZ2 237 aa18.65■□□□□ 0.58
RAB40C-207ENST00000563109 NXPE1Q8N323 547 aa18.65■□□□□ 0.58
RAB40C-207ENST00000563109 DDHD1Q8NEL9 900 aa18.65■□□□□ 0.58
RAB40C-207ENST00000563109 SGSM3Q96HU1 749 aa18.65■□□□□ 0.58
RAB40C-207ENST00000563109 TTC25Q96NG3 672 aa18.65■□□□□ 0.58
RAB40C-207ENST00000563109 PHOX2BQ99453 314 aa18.65■□□□□ 0.58
RAB40C-207ENST00000563109 TRIM56Q9BRZ2 755 aaKnown RBP18.65■□□□□ 0.58
RAB40C-207ENST00000563109 FAM96AQ9H5X1 160 aa18.65■□□□□ 0.58
RAB40C-207ENST00000563109 RRAGDQ9NQL2 400 aaPredicted RBP18.65■□□□□ 0.58
RAB40C-207ENST00000563109 SEMA4GQ9NTN9 838 aa18.65■□□□□ 0.58
RAB40C-207ENST00000563109 MOSPD1Q9UJG1 213 aa18.65■□□□□ 0.58
RAB40C-207ENST00000563109 CNOT6Q9ULM6 557 aaKnown RBP18.65■□□□□ 0.58
RAB40C-207ENST00000563109 SNX11Q9Y5W9 270 aa18.65■□□□□ 0.58
RAB40C-207ENST00000563109 FAM169AQ9Y6X4 670 aa18.65■□□□□ 0.58
RAB40C-207ENST00000563109 PI4KAP42356 2102 aa18.65■□□□□ 0.58
RAB40C-207ENST00000563109 LRP4O75096 1905 aa18.64■□□□□ 0.58
RAB40C-207ENST00000563109 ADAMTS9Q9P2N4 1935 aa18.64■□□□□ 0.58
RAB40C-207ENST00000563109 GON4LQ3T8J9 2241 aa18.64■□□□□ 0.57
RAB40C-207ENST00000563109 CFAP99D6REC4 459 aa18.64■□□□□ 0.57
RAB40C-207ENST00000563109 H3BM21 787 aa18.64■□□□□ 0.57
RAB40C-207ENST00000563109 ARHGAP33O14559 1287 aa18.64■□□□□ 0.57
RAB40C-207ENST00000563109 TNFRSF10CO14798 259 aa18.64■□□□□ 0.57
RAB40C-207ENST00000563109 FOXD2O60548 495 aaPredicted RBP18.64■□□□□ 0.57
RAB40C-207ENST00000563109 RALBP11234 206 aa18.64■□□□□ 0.57
RAB40C-207ENST00000563109 MSH3P20585 1137 aa18.64■□□□□ 0.57
RAB40C-207ENST00000563109 THOC5Q13769 683 aaKnown RBP18.64■□□□□ 0.57
RAB40C-207ENST00000563109 FZD2Q14332 565 aa18.64■□□□□ 0.57
RAB40C-207ENST00000563109 CSRP2Q16527 193 aa18.64■□□□□ 0.57
RAB40C-207ENST00000563109 TPRG1LQ5T0D9 272 aa18.64■□□□□ 0.57
RAB40C-207ENST00000563109 GPRC6AQ5T6X5 926 aa18.64■□□□□ 0.57
RAB40C-207ENST00000563109 TCEAL6Q6IPX3 200 aa18.64■□□□□ 0.57
RAB40C-207ENST00000563109 MRNIPQ6NTE8 343 aa18.64■□□□□ 0.57
RAB40C-207ENST00000563109 CERS6Q6ZMG9 384 aa18.64■□□□□ 0.57
RAB40C-207ENST00000563109 SPATS2Q86XZ4 545 aaKnown RBP18.64■□□□□ 0.57
RAB40C-207ENST00000563109 IGDCC3Q8IVU1 814 aa18.64■□□□□ 0.57
RAB40C-207ENST00000563109 PALM2Q8IXS6 379 aa18.64■□□□□ 0.57
RAB40C-207ENST00000563109 HEXDCQ8WVB3 486 aa18.64■□□□□ 0.57
RAB40C-207ENST00000563109 TCEAL3Q969E4 200 aa18.64■□□□□ 0.57
RAB40C-207ENST00000563109 DCUN1D1Q96GG9 259 aa18.64■□□□□ 0.57
RAB40C-207ENST00000563109 FCRL3Q96P31 734 aaPredicted RBP18.64■□□□□ 0.57
RAB40C-207ENST00000563109 COPS8Q99627 209 aa18.64■□□□□ 0.57
RAB40C-207ENST00000563109 WDR83Q9BRX9 315 aaKnown RBP18.64■□□□□ 0.57
RAB40C-207ENST00000563109 GTPBP2Q9BX10 602 aaKnown RBP18.64■□□□□ 0.57
RAB40C-207ENST00000563109 ERVMER34-1Q9H9K5 563 aa18.64■□□□□ 0.57
RAB40C-207ENST00000563109 TRIM39Q9HCM9 518 aa18.64■□□□□ 0.57
RAB40C-207ENST00000563109 FSCN3Q9NQT6 498 aa18.64■□□□□ 0.57
RAB40C-207ENST00000563109 C20orf96Q9NUD7 363 aaPredicted RBP18.64■□□□□ 0.57
RAB40C-207ENST00000563109 DNAJC28Q9NX36 388 aa18.64■□□□□ 0.57
RAB40C-207ENST00000563109 VPS18Q9P253 973 aa18.64■□□□□ 0.57
RAB40C-207ENST00000563109 NFU1Q9UMS0 254 aa18.64■□□□□ 0.57
RAB40C-207ENST00000563109 TRBV5-4A0A0C4DH59 114 aa18.63■□□□□ 0.57
RAB40C-207ENST00000563109 ZCWPW2A0A1B0GU75 182 aa18.63■□□□□ 0.57
RAB40C-207ENST00000563109 TMEM202A6NGA9 273 aa18.63■□□□□ 0.57
RAB40C-207ENST00000563109 AGAP14A8MT82 685 aa18.63■□□□□ 0.57
RAB40C-207ENST00000563109 PFDN6O15212 129 aa18.63■□□□□ 0.57
RAB40C-207ENST00000563109 CD3EAPO15446 510 aaKnown RBP18.63■□□□□ 0.57
RAB40C-207ENST00000563109 VEGFDO43915 354 aa18.63■□□□□ 0.57
RAB40C-207ENST00000563109 DFNA5O60443 496 aa18.63■□□□□ 0.57
RAB40C-207ENST00000563109 RASGRP1O95267 797 aa18.63■□□□□ 0.57
RAB40C-207ENST00000563109 ENGP17813 658 aa18.63■□□□□ 0.57
RAB40C-207ENST00000563109 ACRV1P26436 265 aa18.63■□□□□ 0.57
RAB40C-207ENST00000563109 TNFRSF8P28908 595 aa18.63■□□□□ 0.57
RAB40C-207ENST00000563109 ECHS1P30084 290 aa18.63■□□□□ 0.57
RAB40C-207ENST00000563109 MAGEA4P43358 317 aa18.63■□□□□ 0.57
RAB40C-207ENST00000563109 ARRB1P49407 418 aaPredicted RBP18.63■□□□□ 0.57
RAB40C-207ENST00000563109 BLKP51451 505 aa18.63■□□□□ 0.57
RAB40C-207ENST00000563109 SRP54P61011 504 aaKnown RBP18.63■□□□□ 0.57
RAB40C-207ENST00000563109 IRX4P78413 519 aa18.63■□□□□ 0.57
RAB40C-207ENST00000563109 BNC1Q01954 994 aa18.63■□□□□ 0.57
RAB40C-207ENST00000563109 PPARDQ03181 441 aa18.63■□□□□ 0.57
RAB40C-207ENST00000563109 SMAD1Q15797 465 aaKnown RBP18.63■□□□□ 0.57
RAB40C-207ENST00000563109 STEAP4Q687X5 459 aa18.63■□□□□ 0.57
RAB40C-207ENST00000563109 PSAPL1Q6NUJ1 521 aa18.63■□□□□ 0.57
RAB40C-207ENST00000563109 UNC5AQ6ZN44 842 aa18.63■□□□□ 0.57
RAB40C-207ENST00000563109 SDCCAG8Q86SQ7 713 aaPredicted RBP18.63■□□□□ 0.57
RAB40C-207ENST00000563109 SERPINA9Q86WD7 417 aa18.63■□□□□ 0.57
RAB40C-207ENST00000563109 EIF1ADQ8N9N8 165 aaKnown RBP18.63■□□□□ 0.57
RAB40C-207ENST00000563109 GSDMBQ8TAX9 411 aa18.63■□□□□ 0.57
RAB40C-207ENST00000563109 CALML6Q8TD86 181 aa18.63■□□□□ 0.57
RAB40C-207ENST00000563109 FAM167BQ9BTA0 163 aa18.63■□□□□ 0.57
RAB40C-207ENST00000563109 ANKZF1Q9H8Y5 726 aa18.63■□□□□ 0.57
RAB40C-207ENST00000563109 RMI1Q9H9A7 625 aa18.63■□□□□ 0.57
RAB40C-207ENST00000563109 FGF22Q9HCT0 170 aa18.63■□□□□ 0.57
RAB40C-207ENST00000563109 ARFGAP3Q9NP61 516 aa18.63■□□□□ 0.57
RAB40C-207ENST00000563109 ZDHHC3Q9NYG2 299 aa18.63■□□□□ 0.57
RAB40C-207ENST00000563109 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.63■□□□□ 0.57
RAB40C-207ENST00000563109 TMPRSS11EQ9UL52 423 aa18.63■□□□□ 0.57
RAB40C-207ENST00000563109 SLC17A4Q9Y2C5 497 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms