RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 SCML1Q9UN30 329 aa14.18□□□□□ -0.14
COMMD4-205ENST00000562310 CCDC189A1A4V9 331 aa14.17□□□□□ -0.14
COMMD4-205ENST00000562310 CFAP99D6REC4 459 aa14.17□□□□□ -0.14
COMMD4-205ENST00000562310 KLF11O14901 512 aa14.17□□□□□ -0.14
COMMD4-205ENST00000562310 TSPAN6O43657 245 aa14.17□□□□□ -0.14
COMMD4-205ENST00000562310 LTA4HP09960 611 aaKnown RBP14.17□□□□□ -0.14
COMMD4-205ENST00000562310 C7P10643 843 aa14.17□□□□□ -0.14
COMMD4-205ENST00000562310 NEFHP12036 1026 aa14.17□□□□□ -0.14
COMMD4-205ENST00000562310 NSG1P42857 185 aa14.17□□□□□ -0.14
COMMD4-205ENST00000562310 LIG3P49916 1009 aa14.17□□□□□ -0.14
COMMD4-205ENST00000562310 METAP1P53582 386 aa14.17□□□□□ -0.14
COMMD4-205ENST00000562310 RPS14P62263 151 aaKnown RBP14.17□□□□□ -0.14
COMMD4-205ENST00000562310 CREB5Q02930 508 aa14.17□□□□□ -0.14
COMMD4-205ENST00000562310 ZBTB16Q05516 673 aa14.17□□□□□ -0.14
COMMD4-205ENST00000562310 CNTN1Q12860 1018 aa14.17□□□□□ -0.14
COMMD4-205ENST00000562310 C2orf27AQ580R0 203 aa14.17□□□□□ -0.14
COMMD4-205ENST00000562310 CTSL3PQ5NE16 218 aa14.17□□□□□ -0.14
COMMD4-205ENST00000562310 HENMT1Q5T8I9 393 aaKnown RBP14.17□□□□□ -0.14
COMMD4-205ENST00000562310 PIP5KL1Q5T9C9 394 aa14.17□□□□□ -0.14
COMMD4-205ENST00000562310 Q6ZVL8 140 aa14.17□□□□□ -0.14
COMMD4-205ENST00000562310 CXorf40AQ8TE69 158 aa14.17□□□□□ -0.14
COMMD4-205ENST00000562310 KCTD4Q8WVF5 259 aa14.17□□□□□ -0.14
COMMD4-205ENST00000562310 VPS35Q96QK1 796 aa14.17□□□□□ -0.14
COMMD4-205ENST00000562310 COPS8Q99627 209 aa14.17□□□□□ -0.14
COMMD4-205ENST00000562310 TMEM216Q9P0N5 145 aa14.17□□□□□ -0.14
COMMD4-205ENST00000562310 SIRPGQ9P1W8 387 aa14.17□□□□□ -0.14
COMMD4-205ENST00000562310 TRMT6Q9UJA5 497 aaKnown RBP14.17□□□□□ -0.14
COMMD4-205ENST00000562310 DUSP12Q9UNI6 340 aa14.17□□□□□ -0.14
COMMD4-205ENST00000562310 ITM2BQ9Y287 266 aa14.17□□□□□ -0.14
COMMD4-205ENST00000562310 FADS3Q9Y5Q0 445 aa14.17□□□□□ -0.14
COMMD4-205ENST00000562310 OAS3Q9Y6K5 1087 aaKnown RBP14.17□□□□□ -0.14
COMMD4-205ENST00000562310 MYO10Q9HD67 2058 aa14.17□□□□□ -0.14
COMMD4-205ENST00000562310 IGLV3-16A0A075B6K0 115 aa14.16□□□□□ -0.14
COMMD4-205ENST00000562310 TCP11X1B4DZS4 312 aa14.16□□□□□ -0.14
COMMD4-205ENST00000562310 E5RI56 91 aa14.16□□□□□ -0.14
COMMD4-205ENST00000562310 MID1O15344 667 aa14.16□□□□□ -0.14
COMMD4-205ENST00000562310 NARSO43776 548 aaKnown RBP14.16□□□□□ -0.14
COMMD4-205ENST00000562310 H2AFYO75367 372 aaKnown RBP14.16□□□□□ -0.14
COMMD4-205ENST00000562310 TOP3BO95985 862 aaKnown RBP14.16□□□□□ -0.14
COMMD4-205ENST00000562310 FAM107AO95990 144 aa14.16□□□□□ -0.14
COMMD4-205ENST00000562310 BPGMP07738 259 aa14.16□□□□□ -0.14
COMMD4-205ENST00000562310 VIMP08670 466 aaKnown RBP14.16□□□□□ -0.14
COMMD4-205ENST00000562310 RBP1P09455 135 aa14.16□□□□□ -0.14
COMMD4-205ENST00000562310 RALBP11234 206 aa14.16□□□□□ -0.14
COMMD4-205ENST00000562310 ZNF37AP17032 561 aaPredicted RBP14.16□□□□□ -0.14
COMMD4-205ENST00000562310 TAC1P20366 129 aa14.16□□□□□ -0.14
COMMD4-205ENST00000562310 DRD3P35462 400 aa14.16□□□□□ -0.14
COMMD4-205ENST00000562310 ETV3P41162 512 aa14.16□□□□□ -0.14
COMMD4-205ENST00000562310 COPAP53621 1224 aa14.16□□□□□ -0.14
COMMD4-205ENST00000562310 PRKAA2P54646 552 aa14.16□□□□□ -0.14
COMMD4-205ENST00000562310 PRKCQQ04759 706 aa14.16□□□□□ -0.14
COMMD4-205ENST00000562310 ZNF460Q14592 562 aa14.16□□□□□ -0.14
COMMD4-205ENST00000562310 MLF2Q15773 248 aaPredicted RBP14.16□□□□□ -0.14
COMMD4-205ENST00000562310 TTC31Q49AM3 519 aaPredicted RBP14.16□□□□□ -0.14
COMMD4-205ENST00000562310 ATP13A5Q4VNC0 1218 aa14.16□□□□□ -0.14
COMMD4-205ENST00000562310 SLC44A4Q53GD3 710 aa14.16□□□□□ -0.14
COMMD4-205ENST00000562310 ATG16L1Q676U5 607 aa14.16□□□□□ -0.14
COMMD4-205ENST00000562310 PTRHD1Q6GMV3 140 aaKnown RBP14.16□□□□□ -0.14
COMMD4-205ENST00000562310 LRRC8EQ6NSJ5 796 aa14.16□□□□□ -0.14
COMMD4-205ENST00000562310 MACC1Q6ZN28 852 aa14.16□□□□□ -0.14
COMMD4-205ENST00000562310 NLRP8Q86W28 1048 aa14.16□□□□□ -0.14
COMMD4-205ENST00000562310 NUDCD3Q8IVD9 361 aa14.16□□□□□ -0.14
COMMD4-205ENST00000562310 PLD6Q8N2A8 252 aaKnown RBP14.16□□□□□ -0.14
COMMD4-205ENST00000562310 NKAPQ8N5F7 415 aaKnown RBP14.16□□□□□ -0.14
COMMD4-205ENST00000562310 TXNDC5Q8NBS9 432 aaKnown RBP14.16□□□□□ -0.14
COMMD4-205ENST00000562310 NUS1Q96E22 293 aa14.16□□□□□ -0.14
COMMD4-205ENST00000562310 SCYL1Q96KG9 808 aa14.16□□□□□ -0.14
COMMD4-205ENST00000562310 UBXN10Q96LJ8 280 aa14.16□□□□□ -0.14
COMMD4-205ENST00000562310 MRPL57Q9BQC6 102 aaKnown RBP14.16□□□□□ -0.14
COMMD4-205ENST00000562310 WRAP53Q9BUR4 548 aaKnown RBP14.16□□□□□ -0.14
COMMD4-205ENST00000562310 MRPL46Q9H2W6 279 aaKnown RBP14.16□□□□□ -0.14
COMMD4-205ENST00000562310 C12orf65Q9H3J6 166 aaKnown RBP14.16□□□□□ -0.14
COMMD4-205ENST00000562310 IGSF5Q9NSI5 407 aa14.16□□□□□ -0.14
COMMD4-205ENST00000562310 RUVBL2Q9Y230 463 aaKnown RBP14.16□□□□□ -0.14
COMMD4-205ENST00000562310 F5P12259 2224 aa14.15□□□□□ -0.14
COMMD4-205ENST00000562310 ANTXRLA6NF34 631 aa14.15□□□□□ -0.14
COMMD4-205ENST00000562310 QSOX1O00391 747 aa14.15□□□□□ -0.14
COMMD4-205ENST00000562310 GPR39O43194 453 aa14.15□□□□□ -0.14
COMMD4-205ENST00000562310 LZTS3O60299 673 aaPredicted RBP14.15□□□□□ -0.14
COMMD4-205ENST00000562310 OR1I1O60431 355 aa14.15□□□□□ -0.14
COMMD4-205ENST00000562310 ADAM23O75077 832 aa14.15□□□□□ -0.14
COMMD4-205ENST00000562310 AP2A2O94973 939 aa14.15□□□□□ -0.14
COMMD4-205ENST00000562310 DNTTP04053 509 aa14.15□□□□□ -0.14
COMMD4-205ENST00000562310 CCDC166P0CW27 439 aa14.15□□□□□ -0.14
COMMD4-205ENST00000562310 MYL2P10916 166 aa14.15□□□□□ -0.14
COMMD4-205ENST00000562310 C6P13671 934 aa14.15□□□□□ -0.14
COMMD4-205ENST00000562310 CPA3P15088 417 aa14.15□□□□□ -0.14
COMMD4-205ENST00000562310 IL9P15248 144 aa14.15□□□□□ -0.14
COMMD4-205ENST00000562310 UGT1A6P19224 532 aa14.15□□□□□ -0.14
COMMD4-205ENST00000562310 UGT1A1P22309 533 aa14.15□□□□□ -0.14
COMMD4-205ENST00000562310 UGT1A4P22310 534 aa14.15□□□□□ -0.14
COMMD4-205ENST00000562310 UGT1A3P35503 534 aa14.15□□□□□ -0.14
COMMD4-205ENST00000562310 UGT1A5P35504 534 aa14.15□□□□□ -0.14
COMMD4-205ENST00000562310 SEC24CP53992 1094 aa14.15□□□□□ -0.14
COMMD4-205ENST00000562310 ATP6V0D1P61421 351 aa14.15□□□□□ -0.14
COMMD4-205ENST00000562310 ASPHQ12797 758 aa14.15□□□□□ -0.14
COMMD4-205ENST00000562310 CCINQ13939 588 aa14.15□□□□□ -0.14
COMMD4-205ENST00000562310 CSHL1Q14406 222 aa14.15□□□□□ -0.14
COMMD4-205ENST00000562310 PCLAFQ15004 111 aa14.15□□□□□ -0.14
COMMD4-205ENST00000562310 ACAP2Q15057 778 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms