RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 ANKS6Q68DC2 871 aa9.74□□□□□ -0.85
SMG1-205ENST00000561947 UGT3A1Q6NUS8 523 aa9.74□□□□□ -0.85
SMG1-205ENST00000561947 CERS6Q6ZMG9 384 aa9.74□□□□□ -0.85
SMG1-205ENST00000561947 SLC26A7Q8TE54 656 aa9.74□□□□□ -0.85
SMG1-205ENST00000561947 TRPC4APQ8TEL6 797 aa9.74□□□□□ -0.85
SMG1-205ENST00000561947 LINGO1Q96FE5 620 aa9.74□□□□□ -0.85
SMG1-205ENST00000561947 CDRT15Q96T59 188 aa9.74□□□□□ -0.85
SMG1-205ENST00000561947 TTC1Q99614 292 aa9.74□□□□□ -0.85
SMG1-205ENST00000561947 C19orf43Q9BQ61 176 aa9.74□□□□□ -0.85
SMG1-205ENST00000561947 C1QTNF3Q9BXJ4 246 aa9.74□□□□□ -0.85
SMG1-205ENST00000561947 SLC46A2Q9BY10 475 aa9.74□□□□□ -0.85
SMG1-205ENST00000561947 WDR41Q9HAD4 459 aa9.74□□□□□ -0.85
SMG1-205ENST00000561947 INTS6Q9UL03 887 aaKnown RBP9.74□□□□□ -0.85
SMG1-205ENST00000561947 TMCO1Q9UM00 188 aa9.74□□□□□ -0.85
SMG1-205ENST00000561947 DNAJC15Q9Y5T4 150 aa9.74□□□□□ -0.85
SMG1-205ENST00000561947 E5RI56 91 aa9.73□□□□□ -0.85
SMG1-205ENST00000561947 PSMD12O00232 456 aaPredicted RBP9.73□□□□□ -0.85
SMG1-205ENST00000561947 CCL16O15467 120 aa9.73□□□□□ -0.85
SMG1-205ENST00000561947 MAP3K7O43318 606 aa9.73□□□□□ -0.85
SMG1-205ENST00000561947 ZNF821O75541 412 aaPredicted RBP9.73□□□□□ -0.85
SMG1-205ENST00000561947 BAG2O95816 211 aa9.73□□□□□ -0.85
SMG1-205ENST00000561947 CYBBP04839 570 aa9.73□□□□□ -0.85
SMG1-205ENST00000561947 CHRM3P20309 590 aa9.73□□□□□ -0.85
SMG1-205ENST00000561947 GKP32189 559 aa9.73□□□□□ -0.85
SMG1-205ENST00000561947 LCP2Q13094 533 aa9.73□□□□□ -0.85
SMG1-205ENST00000561947 EML3Q32P44 896 aa9.73□□□□□ -0.85
SMG1-205ENST00000561947 PIGGQ5H8A4 983 aa9.73□□□□□ -0.85
SMG1-205ENST00000561947 TXNDC11Q6PKC3 985 aa9.73□□□□□ -0.85
SMG1-205ENST00000561947 CPNE9Q8IYJ1 553 aa9.73□□□□□ -0.85
SMG1-205ENST00000561947 GRIN3AQ8TCU5 1115 aa9.73□□□□□ -0.85
SMG1-205ENST00000561947 EEF1AKMT1Q8WVE0 214 aa9.73□□□□□ -0.85
SMG1-205ENST00000561947 TWIST2Q8WVJ9 160 aa9.73□□□□□ -0.85
SMG1-205ENST00000561947 PYDC1Q8WXC3 89 aa9.73□□□□□ -0.85
SMG1-205ENST00000561947 CLP1Q92989 425 aaKnown RBP9.73□□□□□ -0.85
SMG1-205ENST00000561947 LMLNQ96KR4 655 aa9.73□□□□□ -0.85
SMG1-205ENST00000561947 C3orf30Q96M34 536 aa9.73□□□□□ -0.85
SMG1-205ENST00000561947 NPAS2Q99743 824 aa9.73□□□□□ -0.85
SMG1-205ENST00000561947 SMG9Q9H0W8 520 aaKnown RBP9.73□□□□□ -0.85
SMG1-205ENST00000561947 TNKS2Q9H2K2 1166 aa9.73□□□□□ -0.85
SMG1-205ENST00000561947 ATP13A3Q9H7F0 1226 aa9.73□□□□□ -0.85
SMG1-205ENST00000561947 ZFYVE1Q9HBF4 777 aa9.73□□□□□ -0.85
SMG1-205ENST00000561947 PCDHB1Q9Y5F3 818 aa9.73□□□□□ -0.85
SMG1-205ENST00000561947 DOCK6Q96HP0 2047 aa9.73□□□□□ -0.85
SMG1-205ENST00000561947 C1orf232A0A0U1RR37 186 aa9.73□□□□□ -0.85
SMG1-205ENST00000561947 CXorf51AA0A1B0GTR3 108 aa9.73□□□□□ -0.85
SMG1-205ENST00000561947 CAPN8A6NHC0 703 aa9.73□□□□□ -0.85
SMG1-205ENST00000561947 GAPDHSO14556 408 aaPredicted RBP9.73□□□□□ -0.85
SMG1-205ENST00000561947 PRMT5O14744 637 aaPredicted RBP9.73□□□□□ -0.85
SMG1-205ENST00000561947 PRAMEF1O95521 474 aa9.73□□□□□ -0.85
SMG1-205ENST00000561947 GLUD1P00367 558 aa9.73□□□□□ -0.85
SMG1-205ENST00000561947 CLCN7P51798 805 aa9.73□□□□□ -0.85
SMG1-205ENST00000561947 FOXA1P55317 472 aa9.73□□□□□ -0.85
SMG1-205ENST00000561947 CDKN3Q16667 212 aa9.73□□□□□ -0.85
SMG1-205ENST00000561947 GEN1Q17RS7 908 aa9.73□□□□□ -0.85
SMG1-205ENST00000561947 ZNF423Q2M1K9 1284 aa9.73□□□□□ -0.85
SMG1-205ENST00000561947 AGKQ53H12 422 aa9.73□□□□□ -0.85
SMG1-205ENST00000561947 DGKKQ5KSL6 1271 aa9.73□□□□□ -0.85
SMG1-205ENST00000561947 FAM151BQ6UXP7 276 aa9.73□□□□□ -0.85
SMG1-205ENST00000561947 PAF1Q8N7H5 531 aa9.73□□□□□ -0.85
SMG1-205ENST00000561947 ZNF483Q8TF39 744 aaPredicted RBP9.73□□□□□ -0.85
SMG1-205ENST00000561947 SLC22A17Q8WUG5 538 aa9.73□□□□□ -0.85
SMG1-205ENST00000561947 EMILIN2Q9BXX0 1053 aa9.73□□□□□ -0.85
SMG1-205ENST00000561947 MRPL1Q9BYD6 325 aaKnown RBP9.73□□□□□ -0.85
SMG1-205ENST00000561947 AKTIPQ9H8T0 292 aa9.73□□□□□ -0.85
SMG1-205ENST00000561947 UTP6Q9NYH9 597 aaKnown RBP9.73□□□□□ -0.85
SMG1-205ENST00000561947 PACSIN3Q9UKS6 424 aa9.73□□□□□ -0.85
SMG1-205ENST00000561947 ATP6AP2A0A1C7CYW4 349 aa9.72□□□□□ -0.85
SMG1-205ENST00000561947 GOLGA8CPA6NN73 597 aa9.72□□□□□ -0.85
SMG1-205ENST00000561947 PIP5K1BO14986 540 aa9.72□□□□□ -0.85
SMG1-205ENST00000561947 CFLARO15519 480 aa9.72□□□□□ -0.85
SMG1-205ENST00000561947 ATP6AP2O75787 350 aa9.72□□□□□ -0.85
SMG1-205ENST00000561947 SRCP12931 536 aa9.72□□□□□ -0.85
SMG1-205ENST00000561947 BMP1P13497 986 aa9.72□□□□□ -0.85
SMG1-205ENST00000561947 RPS3P23396 243 aaKnown RBP eCLIP9.72□□□□□ -0.85
SMG1-205ENST00000561947 HNF1BP35680 557 aa9.72□□□□□ -0.85
SMG1-205ENST00000561947 THOP1P52888 689 aa9.72□□□□□ -0.85
SMG1-205ENST00000561947 CLNS1AP54105 237 aaKnown RBP9.72□□□□□ -0.85
SMG1-205ENST00000561947 STX5Q13190 355 aa9.72□□□□□ -0.85
SMG1-205ENST00000561947 PITRM1Q5JRX3 1037 aa9.72□□□□□ -0.85
SMG1-205ENST00000561947 TRIM68Q6AZZ1 485 aa9.72□□□□□ -0.85
SMG1-205ENST00000561947 ANKRD12Q6UB98 2062 aa9.72□□□□□ -0.85
SMG1-205ENST00000561947 SNX20Q7Z614 316 aa9.72□□□□□ -0.85
SMG1-205ENST00000561947 SERPINA9Q86WD7 417 aa9.72□□□□□ -0.85
SMG1-205ENST00000561947 GPSM1Q86YR5 675 aa9.72□□□□□ -0.85
SMG1-205ENST00000561947 CMTM8Q8IZV2 173 aa9.72□□□□□ -0.85
SMG1-205ENST00000561947 OR2AP1Q8NGE2 309 aa9.72□□□□□ -0.85
SMG1-205ENST00000561947 ARMC5Q96C12 935 aa9.72□□□□□ -0.85
SMG1-205ENST00000561947 KCNA7Q96RP8 456 aa9.72□□□□□ -0.85
SMG1-205ENST00000561947 TCF25Q9BQ70 676 aa9.72□□□□□ -0.85
SMG1-205ENST00000561947 SARS2Q9NP81 518 aaKnown RBP9.72□□□□□ -0.85
SMG1-205ENST00000561947 SEMA4BQ9NPR2 832 aaPredicted RBP9.72□□□□□ -0.85
SMG1-205ENST00000561947 MYOFQ9NZM1 2061 aa9.72□□□□□ -0.85
SMG1-205ENST00000561947 DHRS7Q9Y394 339 aa9.72□□□□□ -0.85
SMG1-205ENST00000561947 NCF1BA6NI72 391 aaPredicted RBP9.72□□□□□ -0.85
SMG1-205ENST00000561947 IQCF5A8MTL0 148 aa9.72□□□□□ -0.85
SMG1-205ENST00000561947 NCF1CA8MVU1 366 aaPredicted RBP9.72□□□□□ -0.85
SMG1-205ENST00000561947 CLDN7O95471 211 aa9.72□□□□□ -0.85
SMG1-205ENST00000561947 SNRPB2P08579 225 aaKnown RBP9.72□□□□□ -0.85
SMG1-205ENST00000561947 ALDOCP09972 364 aaKnown RBP9.72□□□□□ -0.85
SMG1-205ENST00000561947 NCF1P14598 390 aaPredicted RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms