RNA–Protein interactions for RNA: ENST00000561381.5

USP3-220, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 979 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-220ENST00000561381 KDELC2Q7Z4H8 507 aa11.52□□□□□ -0.57
USP3-220ENST00000561381 MAP7D3Q8IWC1 876 aa11.52□□□□□ -0.57
USP3-220ENST00000561381 PLD5Q8N7P1 536 aa11.52□□□□□ -0.57
USP3-220ENST00000561381 BMPERQ8N8U9 685 aa11.52□□□□□ -0.57
USP3-220ENST00000561381 ZSCAN1Q8NBB4 408 aa11.52□□□□□ -0.57
USP3-220ENST00000561381 OR10G6Q8NH81 332 aa11.52□□□□□ -0.57
USP3-220ENST00000561381 AHCYL2Q96HN2 611 aaKnown RBP11.52□□□□□ -0.57
USP3-220ENST00000561381 CTRCQ99895 268 aa11.52□□□□□ -0.57
USP3-220ENST00000561381 MLPHQ9BV36 600 aaPredicted RBP11.52□□□□□ -0.57
USP3-220ENST00000561381 DDA1Q9BW61 102 aa11.52□□□□□ -0.57
USP3-220ENST00000561381 SLC12A9Q9BXP2 914 aa11.52□□□□□ -0.57
USP3-220ENST00000561381 CEP41Q9BYV8 373 aa11.52□□□□□ -0.57
USP3-220ENST00000561381 FAM117AQ9C073 453 aa11.52□□□□□ -0.57
USP3-220ENST00000561381 FAM83DQ9H4H8 585 aa11.52□□□□□ -0.57
USP3-220ENST00000561381 VPS18Q9P253 973 aa11.52□□□□□ -0.57
USP3-220ENST00000561381 PDP2Q9P2J9 529 aa11.52□□□□□ -0.57
USP3-220ENST00000561381 UVRAGQ9P2Y5 699 aa11.52□□□□□ -0.57
USP3-220ENST00000561381 AMACRQ9UHK6 382 aa11.52□□□□□ -0.57
USP3-220ENST00000561381 DNPEPQ9ULA0 475 aa11.52□□□□□ -0.57
USP3-220ENST00000561381 RPL26L1Q9UNX3 145 aaKnown RBP11.52□□□□□ -0.57
USP3-220ENST00000561381 SETXQ7Z333 2677 aaKnown RBP11.52□□□□□ -0.57
USP3-220ENST00000561381 ASH1LQ9NR48 2969 aaKnown RBP11.51□□□□□ -0.57
USP3-220ENST00000561381 A6NCN8 305 aa11.51□□□□□ -0.57
USP3-220ENST00000561381 B4E171 279 aa11.51□□□□□ -0.57
USP3-220ENST00000561381 ANKRD66B4E2M5 251 aa11.51□□□□□ -0.57
USP3-220ENST00000561381 DUX1O43812 170 aa11.51□□□□□ -0.57
USP3-220ENST00000561381 KRT7P08729 469 aa11.51□□□□□ -0.57
USP3-220ENST00000561381 H2AFZP0C0S5 128 aa11.51□□□□□ -0.57
USP3-220ENST00000561381 PIRTP0C851 137 aa11.51□□□□□ -0.57
USP3-220ENST00000561381 LIFP15018 202 aa11.51□□□□□ -0.57
USP3-220ENST00000561381 ZNF8P17098 575 aaPredicted RBP11.51□□□□□ -0.57
USP3-220ENST00000561381 CA4P22748 312 aa11.51□□□□□ -0.57
USP3-220ENST00000561381 TSPAN7P41732 249 aa11.51□□□□□ -0.57
USP3-220ENST00000561381 MAPK9P45984 424 aa11.51□□□□□ -0.57
USP3-220ENST00000561381 ATP1A2P50993 1020 aa11.51□□□□□ -0.57
USP3-220ENST00000561381 PPIDQ08752 370 aaKnown RBP11.51□□□□□ -0.57
USP3-220ENST00000561381 MESDQ14696 234 aa11.51□□□□□ -0.57
USP3-220ENST00000561381 SLC18A3Q16572 532 aa11.51□□□□□ -0.57
USP3-220ENST00000561381 ASTE1Q2TB18 679 aaPredicted RBP11.51□□□□□ -0.57
USP3-220ENST00000561381 ALS2CLQ60I27 953 aa11.51□□□□□ -0.57
USP3-220ENST00000561381 H2AFVQ71UI9 128 aa11.51□□□□□ -0.57
USP3-220ENST00000561381 IL22RA1Q8N6P7 574 aa11.51□□□□□ -0.57
USP3-220ENST00000561381 GPR26Q8NDV2 337 aa11.51□□□□□ -0.57
USP3-220ENST00000561381 CTNNBL1Q8WYA6 563 aaPredicted RBP11.51□□□□□ -0.57
USP3-220ENST00000561381 NCSTNQ92542 709 aa11.51□□□□□ -0.57
USP3-220ENST00000561381 RNF157Q96PX1 679 aa11.51□□□□□ -0.57
USP3-220ENST00000561381 DPYSL5Q9BPU6 564 aa11.51□□□□□ -0.57
USP3-220ENST00000561381 CLMPQ9H6B4 373 aa11.51□□□□□ -0.57
USP3-220ENST00000561381 SARS2Q9NP81 518 aaKnown RBP11.51□□□□□ -0.57
USP3-220ENST00000561381 PRDM8Q9NQV8 689 aa11.51□□□□□ -0.57
USP3-220ENST00000561381 PKD2L2Q9NZM6 624 aa11.51□□□□□ -0.57
USP3-220ENST00000561381 ATXN10Q9UBB4 475 aa11.51□□□□□ -0.57
USP3-220ENST00000561381 KLHL3Q9UH77 587 aa11.51□□□□□ -0.57
USP3-220ENST00000561381 SHOC2Q9UQ13 582 aa11.51□□□□□ -0.57
USP3-220ENST00000561381 HEY1Q9Y5J3 304 aa11.51□□□□□ -0.57
USP3-220ENST00000561381 HEMK1Q9Y5R4 338 aaPredicted RBP11.51□□□□□ -0.57
USP3-220ENST00000561381 TENM4Q6N022 2769 aa11.51□□□□□ -0.57
USP3-220ENST00000561381 BOD1L1Q8NFC6 3051 aa11.51□□□□□ -0.57
USP3-220ENST00000561381 LRRD1A4D1F6 860 aa11.5□□□□□ -0.57
USP3-220ENST00000561381 C3orf70A6NLC5 250 aaPredicted RBP11.5□□□□□ -0.57
USP3-220ENST00000561381 GOLGA6L19H0YKK7 550 aa11.5□□□□□ -0.57
USP3-220ENST00000561381 GRID2O43424 1007 aa11.5□□□□□ -0.57
USP3-220ENST00000561381 NUAK1O60285 661 aa11.5□□□□□ -0.57
USP3-220ENST00000561381 RAD1O60671 282 aa11.5□□□□□ -0.57
USP3-220ENST00000561381 WISP1O95388 367 aa11.5□□□□□ -0.57
USP3-220ENST00000561381 SLC4A1P02730 911 aa11.5□□□□□ -0.57
USP3-220ENST00000561381 HNRNPH3P31942 346 aaKnown RBP11.5□□□□□ -0.57
USP3-220ENST00000561381 PRSS12P56730 875 aa11.5□□□□□ -0.57
USP3-220ENST00000561381 IFI35P80217 286 aaPredicted RBP11.5□□□□□ -0.57
USP3-220ENST00000561381 AP1B1Q10567 949 aa11.5□□□□□ -0.57
USP3-220ENST00000561381 DCAF12Q5T6F0 453 aa11.5□□□□□ -0.57
USP3-220ENST00000561381 WDR74Q6RFH5 385 aaPredicted RBP11.5□□□□□ -0.57
USP3-220ENST00000561381 XKR5Q6UX68 686 aa11.5□□□□□ -0.57
USP3-220ENST00000561381 NPNTQ6UXI9 565 aa11.5□□□□□ -0.57
USP3-220ENST00000561381 ARHGAP22Q7Z5H3 698 aa11.5□□□□□ -0.57
USP3-220ENST00000561381 SLC9B2Q86UD5 537 aa11.5□□□□□ -0.57
USP3-220ENST00000561381 RAVER1Q8IY67 606 aaKnown RBP11.5□□□□□ -0.57
USP3-220ENST00000561381 CACNA2D3Q8IZS8 1091 aa11.5□□□□□ -0.57
USP3-220ENST00000561381 CCDC112Q8NEF3 446 aa11.5□□□□□ -0.57
USP3-220ENST00000561381 CCHCR1Q8TD31 782 aa11.5□□□□□ -0.57
USP3-220ENST00000561381 RTP4Q96DX8 246 aa11.5□□□□□ -0.57
USP3-220ENST00000561381 IQCDQ96DY2 449 aa11.5□□□□□ -0.57
USP3-220ENST00000561381 RNF31Q96EP0 1072 aa11.5□□□□□ -0.57
USP3-220ENST00000561381 TRIB3Q96RU7 358 aa11.5□□□□□ -0.57
USP3-220ENST00000561381 SPATA16Q9BXB7 569 aa11.5□□□□□ -0.57
USP3-220ENST00000561381 TBC1D10AQ9BXI6 508 aa11.5□□□□□ -0.57
USP3-220ENST00000561381 XPO4Q9C0E2 1151 aaKnown RBP11.5□□□□□ -0.57
USP3-220ENST00000561381 OR2AG1Q9H205 316 aa11.5□□□□□ -0.57
USP3-220ENST00000561381 APMAPQ9HDC9 416 aa11.5□□□□□ -0.57
USP3-220ENST00000561381 HAUS2Q9NVX0 235 aa11.5□□□□□ -0.57
USP3-220ENST00000561381 SCHIP1Q9P0W5 487 aaPredicted RBP11.5□□□□□ -0.57
USP3-220ENST00000561381 ADGRG1Q9Y653 693 aa11.5□□□□□ -0.57
USP3-220ENST00000561381 SPTA1P02549 2419 aa11.5□□□□□ -0.57
USP3-220ENST00000561381 CYSRT1A8MQ03 144 aa11.49□□□□□ -0.57
USP3-220ENST00000561381 MTX2O75431 263 aa11.49□□□□□ -0.57
USP3-220ENST00000561381 TMEM253P0C7T8 217 aa11.49□□□□□ -0.57
USP3-220ENST00000561381 F3P13726 295 aa11.49□□□□□ -0.57
USP3-220ENST00000561381 MAN1A1P33908 653 aa11.49□□□□□ -0.57
USP3-220ENST00000561381 MC2RQ01718 297 aa11.49□□□□□ -0.57
USP3-220ENST00000561381 KCNC4Q03721 635 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms