RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 SLC15A5A6NIM6 579 aa13.14□□□□□ -0.31
CSPG4P11-201ENST00000560634 MATN2O00339 956 aa13.14□□□□□ -0.31
CSPG4P11-201ENST00000560634 ELFN1P0C7U0 828 aa13.14□□□□□ -0.31
CSPG4P11-201ENST00000560634 SIM2Q14190 667 aaPredicted RBP13.14□□□□□ -0.31
CSPG4P11-201ENST00000560634 SLC26A9Q7LBE3 791 aa13.14□□□□□ -0.31
CSPG4P11-201ENST00000560634 SPPL2CQ8IUH8 684 aa13.14□□□□□ -0.31
CSPG4P11-201ENST00000560634 JOSD2Q8TAC2 188 aa13.14□□□□□ -0.31
CSPG4P11-201ENST00000560634 OR8D1Q8WZ84 308 aa13.14□□□□□ -0.31
CSPG4P11-201ENST00000560634 SLC38A4Q969I6 547 aa13.14□□□□□ -0.31
CSPG4P11-201ENST00000560634 CLCC1Q96S66 551 aa13.14□□□□□ -0.31
CSPG4P11-201ENST00000560634 TPK1Q9H3S4 243 aa13.14□□□□□ -0.31
CSPG4P11-201ENST00000560634 RMI1Q9H9A7 625 aa13.14□□□□□ -0.31
CSPG4P11-201ENST00000560634 PPIEQ9UNP9 301 aaKnown RBP13.14□□□□□ -0.31
CSPG4P11-201ENST00000560634 MAN2B2Q9Y2E5 1009 aa13.14□□□□□ -0.31
CSPG4P11-201ENST00000560634 A0A1W2PQ72 361 aa13.14□□□□□ -0.31
CSPG4P11-201ENST00000560634 FAM25EA8MYX2 175 aa13.14□□□□□ -0.31
CSPG4P11-201ENST00000560634 KERAO60938 352 aa13.14□□□□□ -0.31
CSPG4P11-201ENST00000560634 TCEA3O75764 348 aa13.14□□□□□ -0.31
CSPG4P11-201ENST00000560634 CTPS1P17812 591 aa13.14□□□□□ -0.31
CSPG4P11-201ENST00000560634 PPM1AP35813 382 aa13.14□□□□□ -0.31
CSPG4P11-201ENST00000560634 ALDH3A2P51648 485 aa13.14□□□□□ -0.31
CSPG4P11-201ENST00000560634 LARS2Q15031 903 aaKnown RBP13.14□□□□□ -0.31
CSPG4P11-201ENST00000560634 QPCTQ16769 361 aa13.14□□□□□ -0.31
CSPG4P11-201ENST00000560634 FAM151BQ6UXP7 276 aa13.14□□□□□ -0.31
CSPG4P11-201ENST00000560634 SLC4A11Q8NBS3 891 aa13.14□□□□□ -0.31
CSPG4P11-201ENST00000560634 STYXQ8WUJ0 223 aa13.14□□□□□ -0.31
CSPG4P11-201ENST00000560634 ROPN1LQ96C74 230 aa13.14□□□□□ -0.31
CSPG4P11-201ENST00000560634 EXOC2Q96KP1 924 aa13.14□□□□□ -0.31
CSPG4P11-201ENST00000560634 MIOSQ9NXC5 875 aa13.14□□□□□ -0.31
CSPG4P11-201ENST00000560634 REXO2Q9Y3B8 237 aaKnown RBP13.14□□□□□ -0.31
CSPG4P11-201ENST00000560634 TNFRSF11BO00300 401 aa13.14□□□□□ -0.31
CSPG4P11-201ENST00000560634 PAGE1O75459 146 aa13.14□□□□□ -0.31
CSPG4P11-201ENST00000560634 FABP3P05413 133 aa13.14□□□□□ -0.31
CSPG4P11-201ENST00000560634 SPATA31C1P0DKV0 1188 aa13.14□□□□□ -0.31
CSPG4P11-201ENST00000560634 IL18Q14116 193 aa13.14□□□□□ -0.31
CSPG4P11-201ENST00000560634 VSTM1Q6UX27 236 aa13.14□□□□□ -0.31
CSPG4P11-201ENST00000560634 ZNF730Q6ZMV8 503 aa13.14□□□□□ -0.31
CSPG4P11-201ENST00000560634 TDRPQ86YL5 185 aa13.14□□□□□ -0.31
CSPG4P11-201ENST00000560634 GPC2Q8N158 579 aa13.14□□□□□ -0.31
CSPG4P11-201ENST00000560634 FERD3LQ96RJ6 166 aa13.14□□□□□ -0.31
CSPG4P11-201ENST00000560634 TRPV5Q9NQA5 729 aa13.14□□□□□ -0.31
CSPG4P11-201ENST00000560634 NKIRAS2Q9NYR9 191 aa13.14□□□□□ -0.31
CSPG4P11-201ENST00000560634 NUDT4Q9NZJ9 180 aa13.14□□□□□ -0.31
CSPG4P11-201ENST00000560634 TECPR2O15040 1411 aa13.13□□□□□ -0.31
CSPG4P11-201ENST00000560634 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.13□□□□□ -0.31
CSPG4P11-201ENST00000560634 NELFEP18615 380 aaKnown RBP13.13□□□□□ -0.31
CSPG4P11-201ENST00000560634 LIMK2P53671 638 aa13.13□□□□□ -0.31
CSPG4P11-201ENST00000560634 PNLIPRP1P54315 467 aa13.13□□□□□ -0.31
CSPG4P11-201ENST00000560634 PPP2R2BQ00005 443 aa13.13□□□□□ -0.31
CSPG4P11-201ENST00000560634 BEX3Q00994 111 aa13.13□□□□□ -0.31
CSPG4P11-201ENST00000560634 LIPEQ05469 1076 aa13.13□□□□□ -0.31
CSPG4P11-201ENST00000560634 LCP2Q13094 533 aa13.13□□□□□ -0.31
CSPG4P11-201ENST00000560634 CBX2Q14781 532 aaPredicted RBP13.13□□□□□ -0.31
CSPG4P11-201ENST00000560634 ZBTB6Q15916 424 aa13.13□□□□□ -0.31
CSPG4P11-201ENST00000560634 PTPN20Q4JDL3 420 aa13.13□□□□□ -0.31
CSPG4P11-201ENST00000560634 GCNT6Q5T4J0 391 aa13.13□□□□□ -0.31
CSPG4P11-201ENST00000560634 ZYG11AQ6WRX3 759 aa13.13□□□□□ -0.31
CSPG4P11-201ENST00000560634 ZBTB46Q86UZ6 589 aa13.13□□□□□ -0.31
CSPG4P11-201ENST00000560634 P2RY8Q86VZ1 359 aa13.13□□□□□ -0.31
CSPG4P11-201ENST00000560634 SVOPLQ8N434 492 aa13.13□□□□□ -0.31
CSPG4P11-201ENST00000560634 RFKQ969G6 155 aa13.13□□□□□ -0.31
CSPG4P11-201ENST00000560634 AKT1S1Q96B36 256 aa13.13□□□□□ -0.31
CSPG4P11-201ENST00000560634 MCMBPQ9BTE3 642 aa13.13□□□□□ -0.31
CSPG4P11-201ENST00000560634 TMPRSS4Q9NRS4 437 aa13.13□□□□□ -0.31
CSPG4P11-201ENST00000560634 LGALS13Q9UHV8 139 aa13.13□□□□□ -0.31
CSPG4P11-201ENST00000560634 CLDN25C9JDP6 229 aa13.13□□□□□ -0.31
CSPG4P11-201ENST00000560634 TEX46H3BTG2 121 aa13.13□□□□□ -0.31
CSPG4P11-201ENST00000560634 SLC1A5Q15758 541 aa13.13□□□□□ -0.31
CSPG4P11-201ENST00000560634 NEK7Q8TDX7 302 aa13.13□□□□□ -0.31
CSPG4P11-201ENST00000560634 TWIST2Q8WVJ9 160 aa13.13□□□□□ -0.31
CSPG4P11-201ENST00000560634 DPF3Q92784 378 aa13.13□□□□□ -0.31
CSPG4P11-201ENST00000560634 NODALQ96S42 347 aa13.13□□□□□ -0.31
CSPG4P11-201ENST00000560634 TTYH1Q9H313 450 aaPredicted RBP13.13□□□□□ -0.31
CSPG4P11-201ENST00000560634 SP140LQ9H930 580 aa13.13□□□□□ -0.31
CSPG4P11-201ENST00000560634 AGO3Q9H9G7 860 aaKnown RBP13.13□□□□□ -0.31
CSPG4P11-201ENST00000560634 PER2O15055 1255 aa13.13□□□□□ -0.31
CSPG4P11-201ENST00000560634 ATP13A5Q4VNC0 1218 aa13.13□□□□□ -0.31
CSPG4P11-201ENST00000560634 EEF1DP3Q658K8 133 aa13.13□□□□□ -0.31
CSPG4P11-201ENST00000560634 RAVER1Q8IY67 606 aaKnown RBP13.13□□□□□ -0.31
CSPG4P11-201ENST00000560634 CORO1BQ9BR76 489 aa13.13□□□□□ -0.31
CSPG4P11-201ENST00000560634 CLDN9O95484 217 aa13.13□□□□□ -0.31
CSPG4P11-201ENST00000560634 PRPS2P11908 318 aa13.13□□□□□ -0.31
CSPG4P11-201ENST00000560634 GALK1P51570 392 aa13.13□□□□□ -0.31
CSPG4P11-201ENST00000560634 BLMHQ13867 455 aa13.13□□□□□ -0.31
CSPG4P11-201ENST00000560634 ACAP2Q15057 778 aa13.13□□□□□ -0.31
CSPG4P11-201ENST00000560634 ARL13AQ5H913 290 aaPredicted RBP13.13□□□□□ -0.31
CSPG4P11-201ENST00000560634 CXCL17Q6UXB2 119 aa13.13□□□□□ -0.31
CSPG4P11-201ENST00000560634 LAPTM4BQ86VI4 370 aa13.13□□□□□ -0.31
CSPG4P11-201ENST00000560634 C12orf29Q8N999 325 aa13.13□□□□□ -0.31
CSPG4P11-201ENST00000560634 HTRA1Q92743 480 aa13.13□□□□□ -0.31
CSPG4P11-201ENST00000560634 CXorf21Q9HAI6 301 aa13.13□□□□□ -0.31
CSPG4P11-201ENST00000560634 AP2A1O95782 977 aa13.12□□□□□ -0.31
CSPG4P11-201ENST00000560634 C9P02748 559 aa13.12□□□□□ -0.31
CSPG4P11-201ENST00000560634 ZNF12P17014 697 aa13.12□□□□□ -0.31
CSPG4P11-201ENST00000560634 ITPKBP27987 946 aa13.12□□□□□ -0.31
CSPG4P11-201ENST00000560634 RHBDL3P58872 404 aa13.12□□□□□ -0.31
CSPG4P11-201ENST00000560634 VBP1P61758 197 aa13.12□□□□□ -0.31
CSPG4P11-201ENST00000560634 PRKD1Q15139 912 aaPredicted RBP13.12□□□□□ -0.31
CSPG4P11-201ENST00000560634 DCST1Q5T197 706 aa13.12□□□□□ -0.31
CSPG4P11-201ENST00000560634 CCNYL2Q5T2Q4 361 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms