RNA–Protein interactions for RNA: ENST00000560467.1

LDLR-212, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 928 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-212ENST00000560467 ARID1BQ8NFD5 2236 aaPredicted RBP11.76□□□□□ -0.53
LDLR-212ENST00000560467 TEX51A0A1B0GUA7 166 aa11.75□□□□□ -0.53
LDLR-212ENST00000560467 TTC24A2A3L6 582 aaPredicted RBP11.75□□□□□ -0.53
LDLR-212ENST00000560467 PFDN6O15212 129 aa11.75□□□□□ -0.53
LDLR-212ENST00000560467 TP73O15350 636 aa11.75□□□□□ -0.53
LDLR-212ENST00000560467 SLC31A1O15431 190 aa11.75□□□□□ -0.53
LDLR-212ENST00000560467 SLC7A4O43246 635 aa11.75□□□□□ -0.53
LDLR-212ENST00000560467 RIPK2O43353 540 aa11.75□□□□□ -0.53
LDLR-212ENST00000560467 PGLSO95336 258 aa11.75□□□□□ -0.53
LDLR-212ENST00000560467 MPOP05164 745 aa11.75□□□□□ -0.53
LDLR-212ENST00000560467 MMP2P08253 660 aa11.75□□□□□ -0.53
LDLR-212ENST00000560467 MYF5P13349 255 aa11.75□□□□□ -0.53
LDLR-212ENST00000560467 ADRA1AP35348 466 aa11.75□□□□□ -0.53
LDLR-212ENST00000560467 RGRP47804 291 aa11.75□□□□□ -0.53
LDLR-212ENST00000560467 SUOXP51687 545 aa11.75□□□□□ -0.53
LDLR-212ENST00000560467 TAS2R38P59533 333 aa11.75□□□□□ -0.53
LDLR-212ENST00000560467 DAB2P98082 770 aa11.75□□□□□ -0.53
LDLR-212ENST00000560467 OVGP1Q12889 678 aa11.75□□□□□ -0.53
LDLR-212ENST00000560467 POU6F1Q14863 301 aa11.75□□□□□ -0.53
LDLR-212ENST00000560467 KLHL38Q2WGJ6 581 aa11.75□□□□□ -0.53
LDLR-212ENST00000560467 SETMARQ53H47 684 aaPredicted RBP11.75□□□□□ -0.53
LDLR-212ENST00000560467 ERAP2Q6P179 960 aa11.75□□□□□ -0.53
LDLR-212ENST00000560467 ZNF605Q86T29 641 aa11.75□□□□□ -0.53
LDLR-212ENST00000560467 CACTIN-AS1Q8N1I8 211 aa11.75□□□□□ -0.53
LDLR-212ENST00000560467 TMEM145Q8NBT3 493 aa11.75□□□□□ -0.53
LDLR-212ENST00000560467 LSM14AQ8ND56 463 aaKnown RBP11.75□□□□□ -0.53
LDLR-212ENST00000560467 TMIEQ8NEW7 156 aa11.75□□□□□ -0.53
LDLR-212ENST00000560467 OR2A12Q8NGT7 310 aa11.75□□□□□ -0.53
LDLR-212ENST00000560467 OR6K2Q8NGY2 324 aa11.75□□□□□ -0.53
LDLR-212ENST00000560467 GSDMBQ8TAX9 411 aa11.75□□□□□ -0.53
LDLR-212ENST00000560467 GRIN3AQ8TCU5 1115 aa11.75□□□□□ -0.53
LDLR-212ENST00000560467 BRSK1Q8TDC3 778 aa11.75□□□□□ -0.53
LDLR-212ENST00000560467 BLOC1S5Q8TDH9 187 aa11.75□□□□□ -0.53
LDLR-212ENST00000560467 TADA1Q96BN2 335 aa11.75□□□□□ -0.53
LDLR-212ENST00000560467 PWWP2AQ96N64 755 aa11.75□□□□□ -0.53
LDLR-212ENST00000560467 CYTH2Q99418 400 aa11.75□□□□□ -0.53
LDLR-212ENST00000560467 FZD3Q9NPG1 666 aa11.75□□□□□ -0.53
LDLR-212ENST00000560467 PPM1HQ9ULR3 514 aa11.75□□□□□ -0.53
LDLR-212ENST00000560467 PKP3Q9Y446 797 aa11.75□□□□□ -0.53
LDLR-212ENST00000560467 TEX264Q9Y6I9 313 aa11.75□□□□□ -0.53
LDLR-212ENST00000560467 RPS6KL1Q9Y6S9 549 aa11.75□□□□□ -0.53
LDLR-212ENST00000560467 FAM237BA0A1B0GVD1 139 aa11.74□□□□□ -0.53
LDLR-212ENST00000560467 PRAMEF26H0Y7S4 382 aa11.74□□□□□ -0.53
LDLR-212ENST00000560467 KPNA3O00505 521 aaPredicted RBP11.74□□□□□ -0.53
LDLR-212ENST00000560467 MAGEC1O60732 1142 aa11.74□□□□□ -0.53
LDLR-212ENST00000560467 RNGTTO60942 597 aaKnown RBP11.74□□□□□ -0.53
LDLR-212ENST00000560467 UGT2B4P06133 528 aa11.74□□□□□ -0.53
LDLR-212ENST00000560467 ABHD2P08910 425 aa11.74□□□□□ -0.53
LDLR-212ENST00000560467 MYZAPP0CAP1 466 aa11.74□□□□□ -0.53
LDLR-212ENST00000560467 THEGLP0DJG4 465 aa11.74□□□□□ -0.53
LDLR-212ENST00000560467 CYP2A6P11509 494 aaPredicted RBP11.74□□□□□ -0.53
LDLR-212ENST00000560467 DGKAP23743 735 aa11.74□□□□□ -0.53
LDLR-212ENST00000560467 NUDT1P36639 197 aa11.74□□□□□ -0.53
LDLR-212ENST00000560467 GRIA1P42261 906 aa11.74□□□□□ -0.53
LDLR-212ENST00000560467 MAGEA3P43357 314 aa11.74□□□□□ -0.53
LDLR-212ENST00000560467 E2F1Q01094 437 aa11.74□□□□□ -0.53
LDLR-212ENST00000560467 CFHR1Q03591 330 aa11.74□□□□□ -0.53
LDLR-212ENST00000560467 ILF2Q12905 390 aaKnown RBP11.74□□□□□ -0.53
LDLR-212ENST00000560467 MTM1Q13496 603 aa11.74□□□□□ -0.53
LDLR-212ENST00000560467 THOC5Q13769 683 aaKnown RBP11.74□□□□□ -0.53
LDLR-212ENST00000560467 ARHGEF7Q14155 803 aa11.74□□□□□ -0.53
LDLR-212ENST00000560467 GALNT3Q14435 633 aa11.74□□□□□ -0.53
LDLR-212ENST00000560467 SLC29A2Q14542 456 aa11.74□□□□□ -0.53
LDLR-212ENST00000560467 ZNF805Q5CZA5 627 aa11.74□□□□□ -0.53
LDLR-212ENST00000560467 ARSIQ5FYB1 569 aa11.74□□□□□ -0.53
LDLR-212ENST00000560467 FAM182AQ5T1J6 154 aa11.74□□□□□ -0.53
LDLR-212ENST00000560467 CERCAMQ5T4B2 595 aa11.74□□□□□ -0.53
LDLR-212ENST00000560467 PIP5KL1Q5T9C9 394 aa11.74□□□□□ -0.53
LDLR-212ENST00000560467 CDCP2Q5VXM1 449 aa11.74□□□□□ -0.53
LDLR-212ENST00000560467 LRIG3Q6UXM1 1119 aa11.74□□□□□ -0.53
LDLR-212ENST00000560467 TAOK1Q7L7X3 1001 aa11.74□□□□□ -0.53
LDLR-212ENST00000560467 TTC7BQ86TV6 843 aa11.74□□□□□ -0.53
LDLR-212ENST00000560467 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.74□□□□□ -0.53
LDLR-212ENST00000560467 OR4C6Q8NH72 309 aa11.74□□□□□ -0.53
LDLR-212ENST00000560467 PEX13Q92968 403 aa11.74□□□□□ -0.53
LDLR-212ENST00000560467 KLHDC7BQ96G42 594 aa11.74□□□□□ -0.53
LDLR-212ENST00000560467 SIGLEC10Q96LC7 697 aa11.74□□□□□ -0.53
LDLR-212ENST00000560467 RANBP9Q96S59 729 aa11.74□□□□□ -0.53
LDLR-212ENST00000560467 GPR63Q9BZJ6 419 aa11.74□□□□□ -0.53
LDLR-212ENST00000560467 ROPN1BQ9BZX4 212 aaPredicted RBP11.74□□□□□ -0.53
LDLR-212ENST00000560467 KDM4CQ9H3R0 1056 aa11.74□□□□□ -0.53
LDLR-212ENST00000560467 ROPN1Q9HAT0 212 aaPredicted RBP11.74□□□□□ -0.53
LDLR-212ENST00000560467 MRM3Q9HC36 420 aaKnown RBP11.74□□□□□ -0.53
LDLR-212ENST00000560467 CPNE5Q9HCH3 593 aa11.74□□□□□ -0.53
LDLR-212ENST00000560467 MAGEE1Q9HCI5 957 aa11.74□□□□□ -0.53
LDLR-212ENST00000560467 PIH1D1Q9NWS0 290 aaKnown RBP11.74□□□□□ -0.53
LDLR-212ENST00000560467 SYBUQ9NX95 663 aa11.74□□□□□ -0.53
LDLR-212ENST00000560467 NSMCE4AQ9NXX6 385 aa11.74□□□□□ -0.53
LDLR-212ENST00000560467 NINJ2Q9NZG7 142 aa11.74□□□□□ -0.53
LDLR-212ENST00000560467 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.74□□□□□ -0.53
LDLR-212ENST00000560467 PLAAQ9Y263 795 aa11.74□□□□□ -0.53
LDLR-212ENST00000560467 DOCK4Q8N1I0 1966 aa11.74□□□□□ -0.53
LDLR-212ENST00000560467 TENM4Q6N022 2769 aa11.73□□□□□ -0.53
LDLR-212ENST00000560467 EXOC1LA0A1B0GW35 172 aa11.73□□□□□ -0.53
LDLR-212ENST00000560467 A0A1W2PQU0 124 aa11.73□□□□□ -0.53
LDLR-212ENST00000560467 NEMP1O14524 444 aa11.73□□□□□ -0.53
LDLR-212ENST00000560467 STX7O15400 261 aaKnown RBP11.73□□□□□ -0.53
LDLR-212ENST00000560467 HTRA2O43464 458 aaPredicted RBP11.73□□□□□ -0.53
LDLR-212ENST00000560467 LEFTY1O75610 366 aa11.73□□□□□ -0.53
LDLR-212ENST00000560467 USP1O94782 785 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms