RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 IL26Q9NPH9 171 aa13.88□□□□□ -0.19
PKNOX1-209ENST00000560448 BFARQ9NZS9 450 aa13.88□□□□□ -0.19
PKNOX1-209ENST00000560448 ZNF106Q9H2Y7 1883 aaKnown RBP13.87□□□□□ -0.19
PKNOX1-209ENST00000560448 A0A0U1RQS6 177 aa13.87□□□□□ -0.19
PKNOX1-209ENST00000560448 KLHL33A6NCF5 533 aa13.87□□□□□ -0.19
PKNOX1-209ENST00000560448 TMEM202A6NGA9 273 aa13.87□□□□□ -0.19
PKNOX1-209ENST00000560448 FADS2P1A8MWK0 482 aa13.87□□□□□ -0.19
PKNOX1-209ENST00000560448 LMO7DNF2Z398 122 aa13.87□□□□□ -0.19
PKNOX1-209ENST00000560448 CBFA2T3O75081 653 aa13.87□□□□□ -0.19
PKNOX1-209ENST00000560448 SLC25A14O95258 325 aaPredicted RBP13.87□□□□□ -0.19
PKNOX1-209ENST00000560448 CEACAM5P06731 702 aa13.87□□□□□ -0.19
PKNOX1-209ENST00000560448 DR1Q01658 176 aa13.87□□□□□ -0.19
PKNOX1-209ENST00000560448 CUL1Q13616 776 aa13.87□□□□□ -0.19
PKNOX1-209ENST00000560448 PTK6Q13882 451 aa13.87□□□□□ -0.19
PKNOX1-209ENST00000560448 KCNJ11Q14654 390 aa13.87□□□□□ -0.19
PKNOX1-209ENST00000560448 GPR33Q49SQ1 333 aa13.87□□□□□ -0.19
PKNOX1-209ENST00000560448 TPRG1LQ5T0D9 272 aa13.87□□□□□ -0.19
PKNOX1-209ENST00000560448 DUPD1Q68J44 220 aa13.87□□□□□ -0.19
PKNOX1-209ENST00000560448 RFLNAQ6ZTI6 216 aa13.87□□□□□ -0.19
PKNOX1-209ENST00000560448 HOOK3Q86VS8 718 aa13.87□□□□□ -0.19
PKNOX1-209ENST00000560448 KRT222Q8N1A0 295 aa13.87□□□□□ -0.19
PKNOX1-209ENST00000560448 FAM181AQ8N9Y4 354 aa13.87□□□□□ -0.19
PKNOX1-209ENST00000560448 OR4K2Q8NGD2 314 aa13.87□□□□□ -0.19
PKNOX1-209ENST00000560448 OR52K1Q8NGK4 314 aa13.87□□□□□ -0.19
PKNOX1-209ENST00000560448 RHBDD1Q8TEB9 315 aa13.87□□□□□ -0.19
PKNOX1-209ENST00000560448 ULK4Q96C45 1275 aa13.87□□□□□ -0.19
PKNOX1-209ENST00000560448 TRIM51Q9BSJ1 452 aa13.87□□□□□ -0.19
PKNOX1-209ENST00000560448 LRRC61Q9BV99 259 aa13.87□□□□□ -0.19
PKNOX1-209ENST00000560448 XAB2Q9HCS7 855 aaKnown RBP13.87□□□□□ -0.19
PKNOX1-209ENST00000560448 FGF22Q9HCT0 170 aa13.87□□□□□ -0.19
PKNOX1-209ENST00000560448 NLE1Q9NVX2 485 aaPredicted RBP13.87□□□□□ -0.19
PKNOX1-209ENST00000560448 NFU1Q9UMS0 254 aa13.87□□□□□ -0.19
PKNOX1-209ENST00000560448 ARL5AQ9Y689 179 aa13.87□□□□□ -0.19
PKNOX1-209ENST00000560448 CFAP54Q96N23 3096 aa13.87□□□□□ -0.19
PKNOX1-209ENST00000560448 LRP4O75096 1905 aa13.86□□□□□ -0.19
PKNOX1-209ENST00000560448 AGAP14A8MT82 685 aa13.86□□□□□ -0.19
PKNOX1-209ENST00000560448 TNFSF14O43557 240 aa13.86□□□□□ -0.19
PKNOX1-209ENST00000560448 SH3BP5O60239 455 aa13.86□□□□□ -0.19
PKNOX1-209ENST00000560448 PRAMEF1O95521 474 aa13.86□□□□□ -0.19
PKNOX1-209ENST00000560448 FAM153BP0C7A2 387 aa13.86□□□□□ -0.19
PKNOX1-209ENST00000560448 ITGALP20701 1170 aa13.86□□□□□ -0.19
PKNOX1-209ENST00000560448 DRG2P55039 364 aaKnown RBP13.86□□□□□ -0.19
PKNOX1-209ENST00000560448 ILF3Q12906 894 aaKnown RBP eCLIP13.86□□□□□ -0.19
PKNOX1-209ENST00000560448 BNIP3Q12983 259 aa13.86□□□□□ -0.19
PKNOX1-209ENST00000560448 POU6F1Q14863 301 aa13.86□□□□□ -0.19
PKNOX1-209ENST00000560448 FAM153CQ494X1 144 aa13.86□□□□□ -0.19
PKNOX1-209ENST00000560448 PRRT3Q5FWE3 981 aa13.86□□□□□ -0.19
PKNOX1-209ENST00000560448 PCID2Q5JVF3 399 aa13.86□□□□□ -0.19
PKNOX1-209ENST00000560448 PRAMEF14Q5SWL7 426 aa13.86□□□□□ -0.19
PKNOX1-209ENST00000560448 ALS2CLQ60I27 953 aa13.86□□□□□ -0.19
PKNOX1-209ENST00000560448 ZCCHC8Q6NZY4 707 aaKnown RBP13.86□□□□□ -0.19
PKNOX1-209ENST00000560448 ERMP1Q7Z2K6 904 aa13.86□□□□□ -0.19
PKNOX1-209ENST00000560448 SNX20Q7Z614 316 aa13.86□□□□□ -0.19
PKNOX1-209ENST00000560448 JAMLQ86YT9 394 aa13.86□□□□□ -0.19
PKNOX1-209ENST00000560448 HID1Q8IV36 788 aa13.86□□□□□ -0.19
PKNOX1-209ENST00000560448 PELI3Q8N2H9 469 aa13.86□□□□□ -0.19
PKNOX1-209ENST00000560448 SLC25A45Q8N413 288 aa13.86□□□□□ -0.19
PKNOX1-209ENST00000560448 DDHD1Q8NEL9 900 aa13.86□□□□□ -0.19
PKNOX1-209ENST00000560448 PPHLN1Q8NEY8 458 aaKnown RBP13.86□□□□□ -0.19
PKNOX1-209ENST00000560448 IFT81Q8WYA0 676 aa13.86□□□□□ -0.19
PKNOX1-209ENST00000560448 PDXPQ96GD0 296 aa13.86□□□□□ -0.19
PKNOX1-209ENST00000560448 SGSM3Q96HU1 749 aa13.86□□□□□ -0.19
PKNOX1-209ENST00000560448 ZNF514Q96K75 400 aaPredicted RBP13.86□□□□□ -0.19
PKNOX1-209ENST00000560448 AGAP2Q99490 1192 aa13.86□□□□□ -0.19
PKNOX1-209ENST00000560448 ERP44Q9BS26 406 aa13.86□□□□□ -0.19
PKNOX1-209ENST00000560448 GSDMCQ9BYG8 508 aa13.86□□□□□ -0.19
PKNOX1-209ENST00000560448 MRM3Q9HC36 420 aaKnown RBP13.86□□□□□ -0.19
PKNOX1-209ENST00000560448 FTSJ1Q9UET6 329 aa13.86□□□□□ -0.19
PKNOX1-209ENST00000560448 KLF15Q9UIH9 416 aa13.86□□□□□ -0.19
PKNOX1-209ENST00000560448 CNOT6Q9ULM6 557 aaKnown RBP13.86□□□□□ -0.19
PKNOX1-209ENST00000560448 DOLKQ9UPQ8 538 aa13.86□□□□□ -0.19
PKNOX1-209ENST00000560448 CEP250Q9BV73 2442 aa13.85□□□□□ -0.19
PKNOX1-209ENST00000560448 MAGEB16A2A368 324 aa13.85□□□□□ -0.19
PKNOX1-209ENST00000560448 GOLGA8CPA6NN73 597 aa13.85□□□□□ -0.19
PKNOX1-209ENST00000560448 KCNJ13O60928 360 aa13.85□□□□□ -0.19
PKNOX1-209ENST00000560448 SRP72O76094 671 aaKnown RBP13.85□□□□□ -0.19
PKNOX1-209ENST00000560448 KCNK5O95279 499 aa13.85□□□□□ -0.19
PKNOX1-209ENST00000560448 ANXA6P08133 673 aa13.85□□□□□ -0.19
PKNOX1-209ENST00000560448 RPIAP49247 311 aa13.85□□□□□ -0.19
PKNOX1-209ENST00000560448 DUSP3P51452 185 aaPredicted RBP13.85□□□□□ -0.19
PKNOX1-209ENST00000560448 NOVA1P51513 510 aaKnown RBP13.85□□□□□ -0.19
PKNOX1-209ENST00000560448 IL9RQ01113 521 aa13.85□□□□□ -0.19
PKNOX1-209ENST00000560448 ILKQ13418 452 aa13.85□□□□□ -0.19
PKNOX1-209ENST00000560448 NFATC2Q13469 925 aa13.85□□□□□ -0.19
PKNOX1-209ENST00000560448 OLIG2Q13516 323 aa13.85□□□□□ -0.19
PKNOX1-209ENST00000560448 TRIP6Q15654 476 aaKnown RBP13.85□□□□□ -0.19
PKNOX1-209ENST00000560448 PRUNE1Q86TP1 453 aa13.85□□□□□ -0.19
PKNOX1-209ENST00000560448 GATAD2AQ86YP4 633 aa13.85□□□□□ -0.19
PKNOX1-209ENST00000560448 GALNT13Q8IUC8 556 aa13.85□□□□□ -0.19
PKNOX1-209ENST00000560448 PPIL6Q8IXY8 311 aa13.85□□□□□ -0.19
PKNOX1-209ENST00000560448 MREGQ8N565 214 aa13.85□□□□□ -0.19
PKNOX1-209ENST00000560448 TAB3Q8N5C8 712 aaPredicted RBP13.85□□□□□ -0.19
PKNOX1-209ENST00000560448 OR6C4Q8NGE1 309 aa13.85□□□□□ -0.19
PKNOX1-209ENST00000560448 ZNF398Q8TD17 642 aa13.85□□□□□ -0.19
PKNOX1-209ENST00000560448 GPBAR1Q8TDU6 330 aa13.85□□□□□ -0.19
PKNOX1-209ENST00000560448 LMX1AQ8TE12 382 aa13.85□□□□□ -0.19
PKNOX1-209ENST00000560448 OR1E3Q8WZA6 343 aa13.85□□□□□ -0.19
PKNOX1-209ENST00000560448 TTC25Q96NG3 672 aa13.85□□□□□ -0.19
PKNOX1-209ENST00000560448 OR2M4Q96R27 311 aa13.85□□□□□ -0.19
PKNOX1-209ENST00000560448 TTC1Q99614 292 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms