RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 HDAC10Q969S8 669 aa10.8□□□□□ -0.68
TPM1-217ENST00000559108 HIC2Q96JB3 615 aa10.8□□□□□ -0.68
TPM1-217ENST00000559108 WDR92Q96MX6 357 aa10.8□□□□□ -0.68
TPM1-217ENST00000559108 VPS35Q96QK1 796 aa10.8□□□□□ -0.68
TPM1-217ENST00000559108 SRPK1Q96SB4 655 aaKnown RBP10.8□□□□□ -0.68
TPM1-217ENST00000559108 ELF4Q99607 663 aaPredicted RBP10.8□□□□□ -0.68
TPM1-217ENST00000559108 ZSCAN5AQ9BUG6 496 aa10.8□□□□□ -0.68
TPM1-217ENST00000559108 BOCQ9BWV1 1114 aa10.8□□□□□ -0.68
TPM1-217ENST00000559108 NUSAP1Q9BXS6 441 aaKnown RBP10.8□□□□□ -0.68
TPM1-217ENST00000559108 IL22Q9GZX6 179 aa10.8□□□□□ -0.68
TPM1-217ENST00000559108 XAB2Q9HCS7 855 aaKnown RBP10.8□□□□□ -0.68
TPM1-217ENST00000559108 GDF3Q9NR23 364 aa10.8□□□□□ -0.68
TPM1-217ENST00000559108 WHRNQ9P202 907 aa10.8□□□□□ -0.68
TPM1-217ENST00000559108 SLC17A6Q9P2U8 582 aa10.8□□□□□ -0.68
TPM1-217ENST00000559108 ATXN10Q9UBB4 475 aa10.8□□□□□ -0.68
TPM1-217ENST00000559108 ANAPC5Q9UJX4 755 aa10.8□□□□□ -0.68
TPM1-217ENST00000559108 PKP3Q9Y446 797 aa10.8□□□□□ -0.68
TPM1-217ENST00000559108 TEX264Q9Y6I9 313 aa10.8□□□□□ -0.68
TPM1-217ENST00000559108 COL5A1P20908 1838 aaPredicted RBP10.79□□□□□ -0.68
TPM1-217ENST00000559108 C4orf47A7E2U8 309 aa10.79□□□□□ -0.68
TPM1-217ENST00000559108 E7ESA3 106 aa10.79□□□□□ -0.68
TPM1-217ENST00000559108 PIAS2O75928 621 aa10.79□□□□□ -0.68
TPM1-217ENST00000559108 CSF2P04141 144 aa10.79□□□□□ -0.68
TPM1-217ENST00000559108 ZNF8P17098 575 aaPredicted RBP10.79□□□□□ -0.68
TPM1-217ENST00000559108 ELK3P41970 407 aa10.79□□□□□ -0.68
TPM1-217ENST00000559108 RXRGP48443 463 aa10.79□□□□□ -0.68
TPM1-217ENST00000559108 THOP1P52888 689 aa10.79□□□□□ -0.68
TPM1-217ENST00000559108 CTSCP53634 463 aa10.79□□□□□ -0.68
TPM1-217ENST00000559108 SRP54P61011 504 aaKnown RBP10.79□□□□□ -0.68
TPM1-217ENST00000559108 GUCY2DQ02846 1103 aa10.79□□□□□ -0.68
TPM1-217ENST00000559108 NFATC2Q13469 925 aa10.79□□□□□ -0.68
TPM1-217ENST00000559108 C1orf61Q13536 156 aa10.79□□□□□ -0.68
TPM1-217ENST00000559108 TUBB2AQ13885 445 aa10.79□□□□□ -0.68
TPM1-217ENST00000559108 DBN1Q16643 649 aa10.79□□□□□ -0.68
TPM1-217ENST00000559108 BBS9Q3SYG4 887 aa10.79□□□□□ -0.68
TPM1-217ENST00000559108 ANKRD20A4Q4UJ75 823 aa10.79□□□□□ -0.68
TPM1-217ENST00000559108 MAATS1Q7Z4T9 603 aa10.79□□□□□ -0.68
TPM1-217ENST00000559108 TMEM135Q86UB9 458 aa10.79□□□□□ -0.68
TPM1-217ENST00000559108 NRROSQ86YC3 692 aa10.79□□□□□ -0.68
TPM1-217ENST00000559108 HID1Q8IV36 788 aa10.79□□□□□ -0.68
TPM1-217ENST00000559108 ANKMY2Q8IV38 441 aa10.79□□□□□ -0.68
TPM1-217ENST00000559108 PHACTR4Q8IZ21 702 aa10.79□□□□□ -0.68
TPM1-217ENST00000559108 CEP112Q8N8E3 955 aa10.79□□□□□ -0.68
TPM1-217ENST00000559108 RASGEF1AQ8N9B8 481 aa10.79□□□□□ -0.68
TPM1-217ENST00000559108 ZNF548Q8NEK5 533 aaPredicted RBP10.79□□□□□ -0.68
TPM1-217ENST00000559108 DDHD1Q8NEL9 900 aa10.79□□□□□ -0.68
TPM1-217ENST00000559108 PPHLN1Q8NEY8 458 aaKnown RBP10.79□□□□□ -0.68
TPM1-217ENST00000559108 OR56A4Q8NGH8 313 aa10.79□□□□□ -0.68
TPM1-217ENST00000559108 ZNF398Q8TD17 642 aa10.79□□□□□ -0.68
TPM1-217ENST00000559108 DTX3LQ8TDB6 740 aa10.79□□□□□ -0.68
TPM1-217ENST00000559108 SAP25Q8TEE9 199 aa10.79□□□□□ -0.68
TPM1-217ENST00000559108 ZNF669Q96BR6 464 aaPredicted RBP10.79□□□□□ -0.68
TPM1-217ENST00000559108 FAM122AQ96E09 287 aa10.79□□□□□ -0.68
TPM1-217ENST00000559108 SCARF2Q96GP6 870 aaPredicted RBP10.79□□□□□ -0.68
TPM1-217ENST00000559108 CAMK1GQ96NX5 476 aa10.79□□□□□ -0.68
TPM1-217ENST00000559108 TUBB2BQ9BVA1 445 aa10.79□□□□□ -0.68
TPM1-217ENST00000559108 TMEM168Q9H0V1 697 aa10.79□□□□□ -0.68
TPM1-217ENST00000559108 ASB8Q9H765 288 aa10.79□□□□□ -0.68
TPM1-217ENST00000559108 ERVMER34-1Q9H9K5 563 aa10.79□□□□□ -0.68
TPM1-217ENST00000559108 MRM3Q9HC36 420 aaKnown RBP10.79□□□□□ -0.68
TPM1-217ENST00000559108 PHPT1Q9NRX4 125 aaPredicted RBP10.79□□□□□ -0.68
TPM1-217ENST00000559108 DNAAF2Q9NVR5 837 aaKnown RBP10.79□□□□□ -0.68
TPM1-217ENST00000559108 SMOXQ9NWM0 555 aa10.79□□□□□ -0.68
TPM1-217ENST00000559108 DNAJC28Q9NX36 388 aa10.79□□□□□ -0.68
TPM1-217ENST00000559108 BFARQ9NZS9 450 aa10.79□□□□□ -0.68
TPM1-217ENST00000559108 GULP1Q9UBP9 304 aa10.79□□□□□ -0.68
TPM1-217ENST00000559108 SLC23A2Q9UGH3 650 aa10.79□□□□□ -0.68
TPM1-217ENST00000559108 RIMKLBQ9ULI2 386 aa10.79□□□□□ -0.68
TPM1-217ENST00000559108 SUFUQ9UMX1 484 aa10.79□□□□□ -0.68
TPM1-217ENST00000559108 CHMP2BQ9UQN3 213 aa10.79□□□□□ -0.68
TPM1-217ENST00000559108 PRSS21Q9Y6M0 314 aa10.79□□□□□ -0.68
TPM1-217ENST00000559108 IGLV3-16A0A075B6K0 115 aa10.78□□□□□ -0.68
TPM1-217ENST00000559108 LY6G6EA0A0G2JKS1 128 aa10.78□□□□□ -0.68
TPM1-217ENST00000559108 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.78□□□□□ -0.68
TPM1-217ENST00000559108 FAM237BA0A1B0GVD1 139 aa10.78□□□□□ -0.68
TPM1-217ENST00000559108 PRSS38A1L453 326 aa10.78□□□□□ -0.68
TPM1-217ENST00000559108 PRR19A6NJB7 356 aa10.78□□□□□ -0.68
TPM1-217ENST00000559108 SDR42E2A6NKP2 422 aa10.78□□□□□ -0.68
TPM1-217ENST00000559108 CACNB4O00305 520 aaPredicted RBP10.78□□□□□ -0.68
TPM1-217ENST00000559108 TRIM38O00635 465 aa10.78□□□□□ -0.68
TPM1-217ENST00000559108 TM4SF5O14894 197 aa10.78□□□□□ -0.68
TPM1-217ENST00000559108 EML2O95834 649 aa10.78□□□□□ -0.68
TPM1-217ENST00000559108 C1QAP02745 245 aa10.78□□□□□ -0.68
TPM1-217ENST00000559108 RHOXF2BP0C7M4 288 aa10.78□□□□□ -0.68
TPM1-217ENST00000559108 MYF5P13349 255 aa10.78□□□□□ -0.68
TPM1-217ENST00000559108 GNPDA1P46926 289 aa10.78□□□□□ -0.68
TPM1-217ENST00000559108 HK3P52790 923 aa10.78□□□□□ -0.68
TPM1-217ENST00000559108 PLTPP55058 493 aa10.78□□□□□ -0.68
TPM1-217ENST00000559108 CBLBQ13191 982 aa10.78□□□□□ -0.68
TPM1-217ENST00000559108 AASDHQ4L235 1098 aaPredicted RBP10.78□□□□□ -0.68
TPM1-217ENST00000559108 ZNF789Q5FWF6 425 aa10.78□□□□□ -0.68
TPM1-217ENST00000559108 STPG1Q5TH74 334 aa10.78□□□□□ -0.68
TPM1-217ENST00000559108 TRMT10BQ6PF06 316 aaKnown RBP10.78□□□□□ -0.68
TPM1-217ENST00000559108 UNC5AQ6ZN44 842 aa10.78□□□□□ -0.68
TPM1-217ENST00000559108 RD3Q7Z3Z2 195 aa10.78□□□□□ -0.68
TPM1-217ENST00000559108 RABEPKQ7Z6M1 372 aa10.78□□□□□ -0.68
TPM1-217ENST00000559108 C11orf96Q7Z7L8 435 aa10.78□□□□□ -0.68
TPM1-217ENST00000559108 SERPINA9Q86WD7 417 aa10.78□□□□□ -0.68
TPM1-217ENST00000559108 GSPT2Q8IYD1 628 aaKnown RBP10.78□□□□□ -0.68
TPM1-217ENST00000559108 NXPE1Q8N323 547 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms