RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 TSTD2Q5T7W7 516 aa11.33□□□□□ -0.6
SNX1-204ENST00000559061 PPP1R21Q6ZMI0 780 aa11.33□□□□□ -0.6
SNX1-204ENST00000559061 LINC00523Q86TU6 105 aa11.33□□□□□ -0.6
SNX1-204ENST00000559061 PIANPQ8IYJ0 282 aa11.33□□□□□ -0.6
SNX1-204ENST00000559061 MCUQ8NE86 351 aa11.33□□□□□ -0.6
SNX1-204ENST00000559061 GRK7Q8WTQ7 553 aa11.33□□□□□ -0.6
SNX1-204ENST00000559061 CDKN2AIPNLQ96HQ2 116 aa11.33□□□□□ -0.6
SNX1-204ENST00000559061 SERPINB12Q96P63 405 aa11.33□□□□□ -0.6
SNX1-204ENST00000559061 C19orf43Q9BQ61 176 aa11.33□□□□□ -0.6
SNX1-204ENST00000559061 RTKNQ9BST9 563 aa11.33□□□□□ -0.6
SNX1-204ENST00000559061 CDH19Q9H159 772 aa11.33□□□□□ -0.6
SNX1-204ENST00000559061 FAM96AQ9H5X1 160 aa11.33□□□□□ -0.6
SNX1-204ENST00000559061 CYP4F12Q9HCS2 524 aa11.33□□□□□ -0.6
SNX1-204ENST00000559061 CHRAC1Q9NRG0 131 aa11.33□□□□□ -0.6
SNX1-204ENST00000559061 PRKAB1Q9Y478 270 aa11.33□□□□□ -0.6
SNX1-204ENST00000559061 CNOT1A5YKK6 2376 aaKnown RBP11.32□□□□□ -0.6
SNX1-204ENST00000559061 SPAARA0A1B0GVQ0 90 aa11.32□□□□□ -0.6
SNX1-204ENST00000559061 CCDC162PA2VCL2 907 aa11.32□□□□□ -0.6
SNX1-204ENST00000559061 GOLGA8MH3BSY2 632 aa11.32□□□□□ -0.6
SNX1-204ENST00000559061 CHUKO15111 745 aa11.32□□□□□ -0.6
SNX1-204ENST00000559061 YKT6O15498 198 aa11.32□□□□□ -0.6
SNX1-204ENST00000559061 FFAR2O15552 330 aa11.32□□□□□ -0.6
SNX1-204ENST00000559061 FLRT2O43155 660 aa11.32□□□□□ -0.6
SNX1-204ENST00000559061 AQP9O43315 295 aa11.32□□□□□ -0.6
SNX1-204ENST00000559061 SIGLEC6O43699 453 aa11.32□□□□□ -0.6
SNX1-204ENST00000559061 SRP72O76094 671 aaKnown RBP11.32□□□□□ -0.6
SNX1-204ENST00000559061 DKK1O94907 266 aa11.32□□□□□ -0.6
SNX1-204ENST00000559061 RASGRP1O95267 797 aa11.32□□□□□ -0.6
SNX1-204ENST00000559061 CRTAMO95727 393 aa11.32□□□□□ -0.6
SNX1-204ENST00000559061 EML2O95834 649 aa11.32□□□□□ -0.6
SNX1-204ENST00000559061 GAS8O95995 478 aa11.32□□□□□ -0.6
SNX1-204ENST00000559061 CSRP1P21291 193 aaKnown RBP11.32□□□□□ -0.6
SNX1-204ENST00000559061 AK4P27144 223 aaPredicted RBP11.32□□□□□ -0.6
SNX1-204ENST00000559061 NMBRP28336 390 aa11.32□□□□□ -0.6
SNX1-204ENST00000559061 PAFAH1B1P43034 410 aa11.32□□□□□ -0.6
SNX1-204ENST00000559061 RPL21P46778 160 aaKnown RBP11.32□□□□□ -0.6
SNX1-204ENST00000559061 GNPDA1P46926 289 aa11.32□□□□□ -0.6
SNX1-204ENST00000559061 CTSCP53634 463 aa11.32□□□□□ -0.6
SNX1-204ENST00000559061 CDK16Q00536 496 aa11.32□□□□□ -0.6
SNX1-204ENST00000559061 NFATC2Q13469 925 aa11.32□□□□□ -0.6
SNX1-204ENST00000559061 TRADDQ15628 312 aa11.32□□□□□ -0.6
SNX1-204ENST00000559061 DEFB133Q30KQ1 61 aa11.32□□□□□ -0.6
SNX1-204ENST00000559061 FNBP1LQ5T0N5 605 aa11.32□□□□□ -0.6
SNX1-204ENST00000559061 GPRC6AQ5T6X5 926 aa11.32□□□□□ -0.6
SNX1-204ENST00000559061 PDPK2PQ6A1A2 396 aa11.32□□□□□ -0.6
SNX1-204ENST00000559061 PSAPL1Q6NUJ1 521 aa11.32□□□□□ -0.6
SNX1-204ENST00000559061 HIBCHQ6NVY1 386 aaPredicted RBP11.32□□□□□ -0.6
SNX1-204ENST00000559061 MARK2Q7KZI7 788 aaKnown RBP11.32□□□□□ -0.6
SNX1-204ENST00000559061 RD3Q7Z3Z2 195 aa11.32□□□□□ -0.6
SNX1-204ENST00000559061 C11orf96Q7Z7L8 435 aa11.32□□□□□ -0.6
SNX1-204ENST00000559061 EID2Q8N6I1 236 aa11.32□□□□□ -0.6
SNX1-204ENST00000559061 RASGEF1AQ8N9B8 481 aa11.32□□□□□ -0.6
SNX1-204ENST00000559061 DNAAF3Q8N9W5 541 aa11.32□□□□□ -0.6
SNX1-204ENST00000559061 LRRN4CLQ8ND94 238 aa11.32□□□□□ -0.6
SNX1-204ENST00000559061 DDHD1Q8NEL9 900 aa11.32□□□□□ -0.6
SNX1-204ENST00000559061 OR4C6Q8NH72 309 aa11.32□□□□□ -0.6
SNX1-204ENST00000559061 GPBAR1Q8TDU6 330 aa11.32□□□□□ -0.6
SNX1-204ENST00000559061 LMX1AQ8TE12 382 aa11.32□□□□□ -0.6
SNX1-204ENST00000559061 STYXQ8WUJ0 223 aa11.32□□□□□ -0.6
SNX1-204ENST00000559061 KIFC1Q9BW19 673 aa11.32□□□□□ -0.6
SNX1-204ENST00000559061 OR2AG1Q9H205 316 aa11.32□□□□□ -0.6
SNX1-204ENST00000559061 CARS2Q9HA77 564 aaKnown RBP11.32□□□□□ -0.6
SNX1-204ENST00000559061 RAD18Q9NS91 495 aa11.32□□□□□ -0.6
SNX1-204ENST00000559061 GRHL1Q9NZI5 618 aa11.32□□□□□ -0.6
SNX1-204ENST00000559061 VPS18Q9P253 973 aa11.32□□□□□ -0.6
SNX1-204ENST00000559061 GULP1Q9UBP9 304 aa11.32□□□□□ -0.6
SNX1-204ENST00000559061 SLC23A2Q9UGH3 650 aa11.32□□□□□ -0.6
SNX1-204ENST00000559061 RIMKLBQ9ULI2 386 aa11.32□□□□□ -0.6
SNX1-204ENST00000559061 PKP3Q9Y446 797 aa11.32□□□□□ -0.6
SNX1-204ENST00000559061 PTPRBP23467 1997 aa11.32□□□□□ -0.6
SNX1-204ENST00000559061 PIKFYVEQ9Y2I7 2098 aa11.31□□□□□ -0.6
SNX1-204ENST00000559061 CACNA1AO00555 2505 aa11.31□□□□□ -0.6
SNX1-204ENST00000559061 IGLV3-16A0A075B6K0 115 aa11.31□□□□□ -0.6
SNX1-204ENST00000559061 C2orf81A6NN90 581 aa11.31□□□□□ -0.6
SNX1-204ENST00000559061 LMO7DNF2Z398 122 aa11.31□□□□□ -0.6
SNX1-204ENST00000559061 YY2O15391 372 aa11.31□□□□□ -0.6
SNX1-204ENST00000559061 NUAK1O60285 661 aa11.31□□□□□ -0.6
SNX1-204ENST00000559061 PPFIA2O75334 1257 aa11.31□□□□□ -0.6
SNX1-204ENST00000559061 URI1O94763 535 aaPredicted RBP11.31□□□□□ -0.6
SNX1-204ENST00000559061 SEC31AO94979 1220 aaKnown RBP11.31□□□□□ -0.6
SNX1-204ENST00000559061 KCNK5O95279 499 aa11.31□□□□□ -0.6
SNX1-204ENST00000559061 PYGLP06737 847 aa11.31□□□□□ -0.6
SNX1-204ENST00000559061 ADRA1DP25100 572 aa11.31□□□□□ -0.6
SNX1-204ENST00000559061 HTR1BP28222 390 aa11.31□□□□□ -0.6
SNX1-204ENST00000559061 MC4RP32245 332 aa11.31□□□□□ -0.6
SNX1-204ENST00000559061 ADCY8P40145 1251 aa11.31□□□□□ -0.6
SNX1-204ENST00000559061 GRK6P43250 576 aa11.31□□□□□ -0.6
SNX1-204ENST00000559061 TNNT3P45378 269 aaPredicted RBP11.31□□□□□ -0.6
SNX1-204ENST00000559061 LMAN1P49257 510 aa11.31□□□□□ -0.6
SNX1-204ENST00000559061 HNRNPKP61978 463 aaKnown RBP eCLIP11.31□□□□□ -0.6
SNX1-204ENST00000559061 DHX34Q14147 1143 aaKnown RBP11.31□□□□□ -0.6
SNX1-204ENST00000559061 PPP1R7Q15435 360 aa11.31□□□□□ -0.6
SNX1-204ENST00000559061 ZNF658BQ4V348 819 aaPredicted RBP11.31□□□□□ -0.6
SNX1-204ENST00000559061 IZUMO3Q5VZ72 239 aa11.31□□□□□ -0.6
SNX1-204ENST00000559061 CES3Q6UWW8 571 aa11.31□□□□□ -0.6
SNX1-204ENST00000559061 GLRX5Q86SX6 157 aa11.31□□□□□ -0.6
SNX1-204ENST00000559061 IGDCC3Q8IVU1 814 aa11.31□□□□□ -0.6
SNX1-204ENST00000559061 PPIL6Q8IXY8 311 aa11.31□□□□□ -0.6
SNX1-204ENST00000559061 NOA1Q8NC60 698 aaKnown RBP11.31□□□□□ -0.6
SNX1-204ENST00000559061 ZNF398Q8TD17 642 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms