RNA–Protein interactions for RNA: ENST00000558936.5

RABGGTA-207, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-207ENST00000558936 CDK4P11802 303 aa12.51□□□□□ -0.41
RABGGTA-207ENST00000558936 DAB2P98082 770 aa12.51□□□□□ -0.41
RABGGTA-207ENST00000558936 TARDBPQ13148 414 aaKnown RBP eCLIP12.51□□□□□ -0.41
RABGGTA-207ENST00000558936 P3H1Q32P28 736 aa12.51□□□□□ -0.41
RABGGTA-207ENST00000558936 HS1BP3Q53T59 392 aa12.51□□□□□ -0.41
RABGGTA-207ENST00000558936 ZNF569Q5MCW4 686 aa12.51□□□□□ -0.41
RABGGTA-207ENST00000558936 CERCAMQ5T4B2 595 aa12.51□□□□□ -0.41
RABGGTA-207ENST00000558936 LVRNQ6Q4G3 990 aa12.51□□□□□ -0.41
RABGGTA-207ENST00000558936 TMPRSS12Q86WS5 348 aa12.51□□□□□ -0.41
RABGGTA-207ENST00000558936 AGGF1Q8N302 714 aaeCLIP12.51□□□□□ -0.41
RABGGTA-207ENST00000558936 TXLNBQ8N3L3 684 aa12.51□□□□□ -0.41
RABGGTA-207ENST00000558936 GALNT15Q8N3T1 639 aa12.51□□□□□ -0.41
RABGGTA-207ENST00000558936 FSTL5Q8N475 847 aaPredicted RBP12.51□□□□□ -0.41
RABGGTA-207ENST00000558936 DCBLD1Q8N8Z6 715 aa12.51□□□□□ -0.41
RABGGTA-207ENST00000558936 FAM46DQ8NEK8 389 aa12.51□□□□□ -0.41
RABGGTA-207ENST00000558936 OR4K2Q8NGD2 314 aa12.51□□□□□ -0.41
RABGGTA-207ENST00000558936 ATL2Q8NHH9 583 aa12.51□□□□□ -0.41
RABGGTA-207ENST00000558936 GLYATL1Q969I3 302 aa12.51□□□□□ -0.41
RABGGTA-207ENST00000558936 PRR11Q96HE9 360 aaPredicted RBP12.51□□□□□ -0.41
RABGGTA-207ENST00000558936 PLEKHG4BQ96PX9 1271 aa12.51□□□□□ -0.41
RABGGTA-207ENST00000558936 TBL1YQ9BQ87 522 aa12.51□□□□□ -0.41
RABGGTA-207ENST00000558936 SPATA16Q9BXB7 569 aa12.51□□□□□ -0.41
RABGGTA-207ENST00000558936 OR2AG1Q9H205 316 aa12.51□□□□□ -0.41
RABGGTA-207ENST00000558936 TBC1D29Q9UFV1 150 aa12.51□□□□□ -0.41
RABGGTA-207ENST00000558936 FKBPLQ9UIM3 349 aa12.51□□□□□ -0.41
RABGGTA-207ENST00000558936 MOSPD1Q9UJG1 213 aa12.51□□□□□ -0.41
RABGGTA-207ENST00000558936 GPR34Q9UPC5 381 aa12.51□□□□□ -0.41
RABGGTA-207ENST00000558936 DRG1Q9Y295 367 aaKnown RBP12.51□□□□□ -0.41
RABGGTA-207ENST00000558936 LOC400499M0QZD8 3231 aa12.51□□□□□ -0.41
RABGGTA-207ENST00000558936 CPED1A4D0V7 1026 aa12.5□□□□□ -0.41
RABGGTA-207ENST00000558936 TRABD2BA6NFA1 517 aa12.5□□□□□ -0.41
RABGGTA-207ENST00000558936 MROH6A6NGR9 719 aa12.5□□□□□ -0.41
RABGGTA-207ENST00000558936 PDE2AO00408 941 aaPredicted RBP12.5□□□□□ -0.41
RABGGTA-207ENST00000558936 ANXA9O76027 345 aa12.5□□□□□ -0.41
RABGGTA-207ENST00000558936 SUN1O94901 812 aa12.5□□□□□ -0.41
RABGGTA-207ENST00000558936 ECEL1O95672 775 aa12.5□□□□□ -0.41
RABGGTA-207ENST00000558936 ANXA6P08133 673 aa12.5□□□□□ -0.41
RABGGTA-207ENST00000558936 CTSEP14091 401 aa12.5□□□□□ -0.41
RABGGTA-207ENST00000558936 BRAFP15056 766 aa12.5□□□□□ -0.41
RABGGTA-207ENST00000558936 KELP23276 732 aa12.5□□□□□ -0.41
RABGGTA-207ENST00000558936 SEMA5AQ13591 1074 aa12.5□□□□□ -0.41
RABGGTA-207ENST00000558936 ELOCQ15369 112 aa12.5□□□□□ -0.41
RABGGTA-207ENST00000558936 TAF1AQ15573 450 aaPredicted RBP12.5□□□□□ -0.41
RABGGTA-207ENST00000558936 ZNF658BQ4V348 819 aaPredicted RBP12.5□□□□□ -0.41
RABGGTA-207ENST00000558936 SEL1L2Q5TEA6 688 aa12.5□□□□□ -0.41
RABGGTA-207ENST00000558936 ITPRIPL1Q6GPH6 555 aa12.5□□□□□ -0.41
RABGGTA-207ENST00000558936 SLC30A9Q6PML9 568 aa12.5□□□□□ -0.41
RABGGTA-207ENST00000558936 FAM151BQ6UXP7 276 aa12.5□□□□□ -0.41
RABGGTA-207ENST00000558936 ZNF574Q6ZN55 896 aaPredicted RBP12.5□□□□□ -0.41
RABGGTA-207ENST00000558936 FAM83HQ6ZRV2 1179 aaPredicted RBP12.5□□□□□ -0.41
RABGGTA-207ENST00000558936 GLT6D1Q7Z4J2 308 aa12.5□□□□□ -0.41
RABGGTA-207ENST00000558936 TAF8Q7Z7C8 310 aa12.5□□□□□ -0.41
RABGGTA-207ENST00000558936 B3GNT8Q7Z7M8 397 aa12.5□□□□□ -0.41
RABGGTA-207ENST00000558936 SPNS2Q8IVW8 549 aa12.5□□□□□ -0.41
RABGGTA-207ENST00000558936 PIANPQ8IYJ0 282 aa12.5□□□□□ -0.41
RABGGTA-207ENST00000558936 ARL14Q8N4G2 192 aa12.5□□□□□ -0.41
RABGGTA-207ENST00000558936 ARL10Q8N8L6 244 aa12.5□□□□□ -0.41
RABGGTA-207ENST00000558936 RASGEF1AQ8N9B8 481 aa12.5□□□□□ -0.41
RABGGTA-207ENST00000558936 KDF1Q8NAX2 398 aaPredicted RBP12.5□□□□□ -0.41
RABGGTA-207ENST00000558936 OR52K1Q8NGK4 314 aa12.5□□□□□ -0.41
RABGGTA-207ENST00000558936 MDM1Q8TC05 714 aa12.5□□□□□ -0.41
RABGGTA-207ENST00000558936 CCHCR1Q8TD31 782 aa12.5□□□□□ -0.41
RABGGTA-207ENST00000558936 DTX3LQ8TDB6 740 aa12.5□□□□□ -0.41
RABGGTA-207ENST00000558936 BRSK1Q8TDC3 778 aa12.5□□□□□ -0.41
RABGGTA-207ENST00000558936 CCDC74AQ96AQ1 378 aa12.5□□□□□ -0.41
RABGGTA-207ENST00000558936 VPS35Q96QK1 796 aa12.5□□□□□ -0.41
RABGGTA-207ENST00000558936 CCDC3Q9BQI4 270 aa12.5□□□□□ -0.41
RABGGTA-207ENST00000558936 AP1M1Q9BXS5 423 aa12.5□□□□□ -0.41
RABGGTA-207ENST00000558936 TRABDQ9H4I3 376 aa12.5□□□□□ -0.41
RABGGTA-207ENST00000558936 FAM96AQ9H5X1 160 aa12.5□□□□□ -0.41
RABGGTA-207ENST00000558936 TRIM39Q9HCM9 518 aa12.5□□□□□ -0.41
RABGGTA-207ENST00000558936 VPS18Q9P253 973 aa12.5□□□□□ -0.41
RABGGTA-207ENST00000558936 SLC2A6Q9UGQ3 507 aa12.5□□□□□ -0.41
RABGGTA-207ENST00000558936 TTC7AQ9ULT0 858 aaPredicted RBP12.5□□□□□ -0.41
RABGGTA-207ENST00000558936 PADI4Q9UM07 663 aa12.5□□□□□ -0.41
RABGGTA-207ENST00000558936 AAR2Q9Y312 384 aaKnown RBP12.5□□□□□ -0.41
RABGGTA-207ENST00000558936 APC2O95996 2303 aa12.5□□□□□ -0.41
RABGGTA-207ENST00000558936 TRBV23OR9-2A0A075B6M9 112 aa12.49□□□□□ -0.41
RABGGTA-207ENST00000558936 GOLGA6L9A6NEM1 432 aa12.49□□□□□ -0.41
RABGGTA-207ENST00000558936 OR51F1A6NGY5 319 aa12.49□□□□□ -0.41
RABGGTA-207ENST00000558936 MT-CO3P00414 261 aa12.49□□□□□ -0.41
RABGGTA-207ENST00000558936 GP1BAP07359 652 aa12.49□□□□□ -0.41
RABGGTA-207ENST00000558936 STIP1P31948 543 aaKnown RBP12.49□□□□□ -0.41
RABGGTA-207ENST00000558936 DUSP3P51452 185 aaPredicted RBP12.49□□□□□ -0.41
RABGGTA-207ENST00000558936 CCL7P80098 99 aa12.49□□□□□ -0.41
RABGGTA-207ENST00000558936 TMPRSS15P98073 1019 aa12.49□□□□□ -0.41
RABGGTA-207ENST00000558936 E2F1Q01094 437 aa12.49□□□□□ -0.41
RABGGTA-207ENST00000558936 GSE1Q14687 1217 aa12.49□□□□□ -0.41
RABGGTA-207ENST00000558936 NR0B2Q15466 257 aa12.49□□□□□ -0.41
RABGGTA-207ENST00000558936 CYP1B1Q16678 543 aa12.49□□□□□ -0.41
RABGGTA-207ENST00000558936 CCDC38Q502W7 563 aa12.49□□□□□ -0.41
RABGGTA-207ENST00000558936 GPRC6AQ5T6X5 926 aa12.49□□□□□ -0.41
RABGGTA-207ENST00000558936 ANKRD22Q5VYY1 191 aa12.49□□□□□ -0.41
RABGGTA-207ENST00000558936 ZNF438Q7Z4V0 828 aa12.49□□□□□ -0.41
RABGGTA-207ENST00000558936 SDR16C5Q8N3Y7 309 aa12.49□□□□□ -0.41
RABGGTA-207ENST00000558936 LILRA3Q8N6C8 439 aaPredicted RBP12.49□□□□□ -0.41
RABGGTA-207ENST00000558936 OR13J1Q8NGT2 312 aa12.49□□□□□ -0.41
RABGGTA-207ENST00000558936 DNAJC1Q96KC8 554 aaKnown RBP12.49□□□□□ -0.41
RABGGTA-207ENST00000558936 OR2M4Q96R27 311 aa12.49□□□□□ -0.41
RABGGTA-207ENST00000558936 OSBPL9Q96SU4 736 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms