RNA–Protein interactions for RNA: ENST00000558288.1

HMG20A-204, Transcript of high mobility group 20A, humanhuman

Gene HMG20A, Length 3,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-204ENST00000558288 TMBIM1Q969X1 311 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 GDF15Q99988 308 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 C17orf80Q9BSJ5 609 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 ASPSCR1Q9BZE9 553 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 MTIF3Q9H2K0 278 aaKnown RBP5.04□□□□□ -1.6
HMG20A-204ENST00000558288 TRIT1Q9H3H1 467 aaKnown RBP5.04□□□□□ -1.6
HMG20A-204ENST00000558288 TOR3AQ9H497 397 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 SMURF2Q9HAU4 748 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 MOV10Q9HCE1 1003 aaKnown RBP5.04□□□□□ -1.6
HMG20A-204ENST00000558288 CASS4Q9NQ75 786 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 ITM2CQ9NQX7 267 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 WDR70Q9NW82 654 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 USP22Q9UPT9 525 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 BTRCQ9Y297 605 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 MAFBQ9Y5Q3 323 aaPredicted RBP5.04□□□□□ -1.6
HMG20A-204ENST00000558288 A0A087WZ62 844 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 GRXCR1A8MXD5 290 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 ZNF99A8MXY4 864 aaPredicted RBP5.04□□□□□ -1.6
HMG20A-204ENST00000558288 TARM1B6A8C7 271 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 M0QYT0 321 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 SEPT4O43236 478 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 KPNA6O60684 536 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 UGT2B11O75310 529 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 CCNKO75909 580 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 LRIG2O94898 1065 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 PARNO95453 639 aaKnown RBP5.04□□□□□ -1.6
HMG20A-204ENST00000558288 JCHAINP01591 159 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 LINC00032P0C843 101 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 HGFP14210 728 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 GPX3P22352 226 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 SLC1A2P43004 574 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 IL5RAQ01344 420 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 CDH17Q12864 832 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 PPP1R8Q12972 351 aaKnown RBP5.04□□□□□ -1.6
HMG20A-204ENST00000558288 DAG1Q14118 895 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.04□□□□□ -1.6
HMG20A-204ENST00000558288 NAPEPLDQ6IQ20 393 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 SLC16A12Q6ZSM3 486 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 RALGPS2Q86X27 583 aaPredicted RBP5.04□□□□□ -1.6
HMG20A-204ENST00000558288 MFSD6LQ8IWD5 586 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 SLC22A17Q8WUG5 538 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 NSMCE2Q96MF7 247 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 MRPL45Q9BRJ2 306 aaKnown RBP5.04□□□□□ -1.6
HMG20A-204ENST00000558288 MLPHQ9BV36 600 aaPredicted RBP5.04□□□□□ -1.6
HMG20A-204ENST00000558288 C6orf62Q9GZU0 229 aaPredicted RBP5.04□□□□□ -1.6
HMG20A-204ENST00000558288 ALG9Q9H6U8 611 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 MID1IP1Q9NPA3 183 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 TRPV5Q9NQA5 729 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 OGDHLQ9ULD0 1010 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 KIAA1257Q9ULG3 409 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 PCDHGA8Q9Y5G5 932 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 UNC80Q8N2C7 3258 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 A0A087X1B8 175 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 TTC24A2A3L6 582 aaPredicted RBP5.04□□□□□ -1.6
HMG20A-204ENST00000558288 ZNF487B1APH4 448 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 SPATA31C2B4DYI2 1134 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 VWA5AO00534 786 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 PIP5K1BO14986 540 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 HCRTO43612 131 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 HS6ST1O60243 411 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 RFPL2O75678 378 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 SLC4A1P02730 911 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 CPB1P15086 417 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 CD40LGP29965 261 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 ATICP31939 592 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 MTHFRP42898 656 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 ALDH3A2P51648 485 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 IST1P53990 364 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 TPI1P60174 286 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 NCS1P62166 190 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 PITX1P78337 314 aaPredicted RBP5.04□□□□□ -1.6
HMG20A-204ENST00000558288 RBP5P82980 135 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 IFITM2Q01629 132 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 GRB7Q14451 532 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 MXD4Q14582 209 aaPredicted RBP5.04□□□□□ -1.6
HMG20A-204ENST00000558288 PYCR3Q53H96 274 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 C6orf141Q5SZD1 244 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 RBM20Q5T481 1227 aaKnown RBP5.04□□□□□ -1.6
HMG20A-204ENST00000558288 IRAK1BP1Q5VVH5 260 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 IER5Q5VY09 327 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 FAM160B1Q5W0V3 765 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 TTC23Q5W5X9 447 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 ESRP1Q6NXG1 681 aaKnown RBP5.04□□□□□ -1.6
HMG20A-204ENST00000558288 USP51Q70EK9 711 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 OTOP3Q7RTS5 596 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 TFAP2DQ7Z6R9 452 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 GATAD2AQ86YP4 633 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 SYTL1Q8IYJ3 562 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 MINDY1Q8N5J2 469 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 PNPLA1Q8N8W4 532 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 ATP6V0D2Q8N8Y2 350 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 LEMD2Q8NC56 503 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 TTC16Q8NEE8 873 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 PPHLN1Q8NEY8 458 aaKnown RBP5.04□□□□□ -1.6
HMG20A-204ENST00000558288 BIRC7Q96CA5 298 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 CCDC126Q96EE4 140 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 CELF6Q96J87 481 aaKnown RBP5.04□□□□□ -1.6
HMG20A-204ENST00000558288 GPR78Q96P69 363 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 CDX2Q99626 313 aaPredicted RBP5.04□□□□□ -1.6
HMG20A-204ENST00000558288 TINF2Q9BSI4 451 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms