RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 TMEM98Q9Y2Y6 226 aa21.09■□□□□ 0.97
CASC4-204ENST00000557945 OAS3Q9Y6K5 1087 aaKnown RBP21.09■□□□□ 0.97
CASC4-204ENST00000557945 VPS13AQ96RL7 3174 aa21.08■□□□□ 0.97
CASC4-204ENST00000557945 TMEM202A6NGA9 273 aa21.08■□□□□ 0.96
CASC4-204ENST00000557945 ARHGAP33O14559 1287 aa21.08■□□□□ 0.96
CASC4-204ENST00000557945 MTX2O75431 263 aa21.08■□□□□ 0.96
CASC4-204ENST00000557945 TTC4O95801 387 aa21.08■□□□□ 0.96
CASC4-204ENST00000557945 ZNF806P0C7X5 589 aa21.08■□□□□ 0.96
CASC4-204ENST00000557945 CA5AP35218 305 aa21.08■□□□□ 0.96
CASC4-204ENST00000557945 CTSKP43235 329 aa21.08■□□□□ 0.96
CASC4-204ENST00000557945 CDKN1CP49918 316 aaPredicted RBP21.08■□□□□ 0.96
CASC4-204ENST00000557945 FZD2Q14332 565 aa21.08■□□□□ 0.96
CASC4-204ENST00000557945 CRYMQ14894 314 aa21.08■□□□□ 0.96
CASC4-204ENST00000557945 SF3A2Q15428 464 aaKnown RBP21.08■□□□□ 0.96
CASC4-204ENST00000557945 GPR33Q49SQ1 333 aa21.08■□□□□ 0.96
CASC4-204ENST00000557945 FASTKD1Q53R41 847 aaKnown RBP21.08■□□□□ 0.96
CASC4-204ENST00000557945 SPANXN3Q5MJ09 141 aa21.08■□□□□ 0.96
CASC4-204ENST00000557945 PRAMEF14Q5SWL7 426 aa21.08■□□□□ 0.96
CASC4-204ENST00000557945 ZNF648Q5T619 568 aaPredicted RBP21.08■□□□□ 0.96
CASC4-204ENST00000557945 GPRC6AQ5T6X5 926 aa21.08■□□□□ 0.96
CASC4-204ENST00000557945 ASCL5Q7RTU5 278 aa21.08■□□□□ 0.96
CASC4-204ENST00000557945 DCLK2Q8N568 766 aa21.08■□□□□ 0.96
CASC4-204ENST00000557945 GPR161Q8N6U8 529 aaKnown RBP21.08■□□□□ 0.96
CASC4-204ENST00000557945 OR56A4Q8NGH8 313 aa21.08■□□□□ 0.96
CASC4-204ENST00000557945 TBRG4Q969Z0 631 aaKnown RBP eCLIP21.08■□□□□ 0.964e-10■■■■■ 86.3
CASC4-204ENST00000557945 ULK4Q96C45 1275 aa21.08■□□□□ 0.96
CASC4-204ENST00000557945 GTPBP2Q9BX10 602 aaKnown RBP21.08■□□□□ 0.96
CASC4-204ENST00000557945 SEMA4GQ9NTN9 838 aa21.08■□□□□ 0.96
CASC4-204ENST00000557945 IL1RAPL1Q9NZN1 696 aa21.08■□□□□ 0.96
CASC4-204ENST00000557945 KLQ9UEF7 1012 aa21.08■□□□□ 0.96
CASC4-204ENST00000557945 MYO15AQ9UKN7 3530 aa21.07■□□□□ 0.96
CASC4-204ENST00000557945 KNL1Q8NG31 2342 aa21.07■□□□□ 0.96
CASC4-204ENST00000557945 ZCWPW2A0A1B0GU75 182 aa21.07■□□□□ 0.96
CASC4-204ENST00000557945 GOLGA8KD6RF30 607 aa21.07■□□□□ 0.96
CASC4-204ENST00000557945 GOLGA8TH3BQL2 631 aa21.07■□□□□ 0.96
CASC4-204ENST00000557945 LRP3O75074 770 aa21.07■□□□□ 0.96
CASC4-204ENST00000557945 FOXN2P32314 431 aa21.07■□□□□ 0.96
CASC4-204ENST00000557945 POLD2P49005 469 aa21.07■□□□□ 0.96
CASC4-204ENST00000557945 CBLBQ13191 982 aa21.07■□□□□ 0.96
CASC4-204ENST00000557945 LONRF1Q17RB8 773 aa21.07■□□□□ 0.96
CASC4-204ENST00000557945 ZNF542PQ5EBM4 170 aa21.07■□□□□ 0.96
CASC4-204ENST00000557945 LDLRAP1Q5SW96 308 aa21.07■□□□□ 0.96
CASC4-204ENST00000557945 PSAPL1Q6NUJ1 521 aa21.07■□□□□ 0.96
CASC4-204ENST00000557945 IL27RAQ6UWB1 636 aa21.07■□□□□ 0.96
CASC4-204ENST00000557945 UNC5AQ6ZN44 842 aa21.07■□□□□ 0.96
CASC4-204ENST00000557945 CEP128Q6ZU80 1094 aa21.07■□□□□ 0.96
CASC4-204ENST00000557945 MARK2Q7KZI7 788 aaKnown RBP21.07■□□□□ 0.96
CASC4-204ENST00000557945 PARGQ86W56 976 aa21.07■□□□□ 0.96
CASC4-204ENST00000557945 PALM2Q8IXS6 379 aa21.07■□□□□ 0.96
CASC4-204ENST00000557945 PIANPQ8IYJ0 282 aa21.07■□□□□ 0.96
CASC4-204ENST00000557945 ZDHHC5Q9C0B5 715 aa21.07■□□□□ 0.96
CASC4-204ENST00000557945 PHACTR1Q9C0D0 580 aa21.07■□□□□ 0.96
CASC4-204ENST00000557945 CATSPERZQ9NTU4 200 aa21.07■□□□□ 0.96
CASC4-204ENST00000557945 C20orf96Q9NUD7 363 aaPredicted RBP21.07■□□□□ 0.96
CASC4-204ENST00000557945 SMOXQ9NWM0 555 aa21.07■□□□□ 0.96
CASC4-204ENST00000557945 DNAJC28Q9NX36 388 aa21.07■□□□□ 0.96
CASC4-204ENST00000557945 FAM169AQ9Y6X4 670 aa21.07■□□□□ 0.96
CASC4-204ENST00000557945 ZNF106Q9H2Y7 1883 aaKnown RBP21.06■□□□□ 0.96
CASC4-204ENST00000557945 RALGAPA1Q6GYQ0 2036 aa21.06■□□□□ 0.96
CASC4-204ENST00000557945 CD3EAPO15446 510 aaKnown RBP21.06■□□□□ 0.96
CASC4-204ENST00000557945 ENGP17813 658 aa21.06■□□□□ 0.96
CASC4-204ENST00000557945 ARNTP27540 789 aa21.06■□□□□ 0.96
CASC4-204ENST00000557945 ECHS1P30084 290 aa21.06■□□□□ 0.96
CASC4-204ENST00000557945 AKT1P31749 480 aa21.06■□□□□ 0.96
CASC4-204ENST00000557945 MAGEA4P43358 317 aa21.06■□□□□ 0.96
CASC4-204ENST00000557945 ARCN1P48444 511 aaKnown RBP21.06■□□□□ 0.96
CASC4-204ENST00000557945 ATXN3P54252 364 aaPredicted RBP21.06■□□□□ 0.96
CASC4-204ENST00000557945 EIF2B5Q13144 721 aaKnown RBP21.06■□□□□ 0.96
CASC4-204ENST00000557945 THOC5Q13769 683 aaKnown RBP21.06■□□□□ 0.96
CASC4-204ENST00000557945 CSRP2Q16527 193 aa21.06■□□□□ 0.96
CASC4-204ENST00000557945 CAPN12Q6ZSI9 719 aa21.06■□□□□ 0.96
CASC4-204ENST00000557945 RD3Q7Z3Z2 195 aa21.06■□□□□ 0.96
CASC4-204ENST00000557945 SERPINA9Q86WD7 417 aa21.06■□□□□ 0.96
CASC4-204ENST00000557945 NXPE1Q8N323 547 aa21.06■□□□□ 0.96
CASC4-204ENST00000557945 OR1E3Q8WZA6 343 aa21.06■□□□□ 0.96
CASC4-204ENST00000557945 TSACCQ96A04 125 aaPredicted RBP21.06■□□□□ 0.96
CASC4-204ENST00000557945 C9orf72Q96LT7 481 aa21.06■□□□□ 0.96
CASC4-204ENST00000557945 TSPYL1Q9H0U9 437 aa21.06■□□□□ 0.96
CASC4-204ENST00000557945 OR2AG1Q9H205 316 aa21.06■□□□□ 0.96
CASC4-204ENST00000557945 ANKZF1Q9H8Y5 726 aa21.06■□□□□ 0.96
CASC4-204ENST00000557945 TRIM39Q9HCM9 518 aa21.06■□□□□ 0.96
CASC4-204ENST00000557945 FGF22Q9HCT0 170 aa21.06■□□□□ 0.96
CASC4-204ENST00000557945 PARD6AQ9NPB6 346 aa21.06■□□□□ 0.96
CASC4-204ENST00000557945 MRPL40Q9NQ50 206 aaKnown RBP21.06■□□□□ 0.96
CASC4-204ENST00000557945 OTOGLQ3ZCN5 2332 aa21.06■□□□□ 0.96
CASC4-204ENST00000557945 DMDP11532 3685 aa21.06■□□□□ 0.96
CASC4-204ENST00000557945 CACNA1EQ15878 2313 aa21.05■□□□□ 0.96
CASC4-204ENST00000557945 CEACAM5P06731 702 aa21.05■□□□□ 0.96
CASC4-204ENST00000557945 MSH3P20585 1137 aa21.05■□□□□ 0.96
CASC4-204ENST00000557945 SRP54P61011 504 aaKnown RBP21.05■□□□□ 0.96
CASC4-204ENST00000557945 PPARDQ03181 441 aa21.05■□□□□ 0.96
CASC4-204ENST00000557945 ALG11Q2TAA5 492 aa21.05■□□□□ 0.96
CASC4-204ENST00000557945 HLA-BQ31612 363 aa21.05■□□□□ 0.96
CASC4-204ENST00000557945 KHDC1Q4VXA5 237 aaKnown RBP21.05■□□□□ 0.96
CASC4-204ENST00000557945 STEAP4Q687X5 459 aa21.05■□□□□ 0.96
CASC4-204ENST00000557945 NEPROQ6NW34 567 aa21.05■□□□□ 0.96
CASC4-204ENST00000557945 ADGRG6Q86SQ4 1221 aa21.05■□□□□ 0.96
CASC4-204ENST00000557945 HID1Q8IV36 788 aa21.05■□□□□ 0.96
CASC4-204ENST00000557945 DDHD1Q8NEL9 900 aa21.05■□□□□ 0.96
CASC4-204ENST00000557945 PDXPQ96GD0 296 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms