RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 C13orf42A0A1B0GVH6 325 aa3.79□□□□□ -1.8
TDP1-217ENST00000557782 KRTAP23-1A1A580 65 aa3.79□□□□□ -1.8
TDP1-217ENST00000557782 C17orf102A2RUQ5 167 aa3.79□□□□□ -1.8
TDP1-217ENST00000557782 CPED1A4D0V7 1026 aa3.79□□□□□ -1.8
TDP1-217ENST00000557782 FOXS1O43638 330 aa3.79□□□□□ -1.8
TDP1-217ENST00000557782 CRCPO75575 148 aa3.79□□□□□ -1.8
TDP1-217ENST00000557782 AKAP3O75969 853 aa3.79□□□□□ -1.8
TDP1-217ENST00000557782 IGHA1P01876 353 aa3.79□□□□□ -1.8
TDP1-217ENST00000557782 C8AP07357 584 aa3.79□□□□□ -1.8
TDP1-217ENST00000557782 FAM86B2P0C5J1 330 aa3.79□□□□□ -1.8
TDP1-217ENST00000557782 ELFN1P0C7U0 828 aa3.79□□□□□ -1.8
TDP1-217ENST00000557782 TFPIP10646 304 aa3.79□□□□□ -1.8
TDP1-217ENST00000557782 EPORP19235 508 aa3.79□□□□□ -1.8
TDP1-217ENST00000557782 NR2F2P24468 414 aa3.79□□□□□ -1.8
TDP1-217ENST00000557782 HOXC9P31274 260 aa3.79□□□□□ -1.8
TDP1-217ENST00000557782 RABIFP47224 123 aa3.79□□□□□ -1.8
TDP1-217ENST00000557782 FASLGP48023 281 aa3.79□□□□□ -1.8
TDP1-217ENST00000557782 KCNJ1P48048 391 aa3.79□□□□□ -1.8
TDP1-217ENST00000557782 CAMLGP49069 296 aa3.79□□□□□ -1.8
TDP1-217ENST00000557782 GFPT1Q06210 699 aaPredicted RBP3.79□□□□□ -1.8
TDP1-217ENST00000557782 ARHGEF6Q15052 776 aa3.79□□□□□ -1.8
TDP1-217ENST00000557782 VMACQ2NL98 169 aa3.79□□□□□ -1.8
TDP1-217ENST00000557782 ATP13A5Q4VNC0 1218 aa3.79□□□□□ -1.8
TDP1-217ENST00000557782 SYTL3Q4VX76 610 aa3.79□□□□□ -1.8
TDP1-217ENST00000557782 TEX35Q5T0J7 233 aa3.79□□□□□ -1.8
TDP1-217ENST00000557782 LAIR1Q6GTX8 287 aa3.79□□□□□ -1.8
TDP1-217ENST00000557782 NCAPH2Q6IBW4 605 aa3.79□□□□□ -1.8
TDP1-217ENST00000557782 TEX38Q6PEX7 206 aa3.79□□□□□ -1.8
TDP1-217ENST00000557782 FBXO46Q6PJ61 603 aaPredicted RBP3.79□□□□□ -1.8
TDP1-217ENST00000557782 LINGO2Q7L985 606 aa3.79□□□□□ -1.8
TDP1-217ENST00000557782 TMEM173Q86WV6 379 aaPredicted RBP3.79□□□□□ -1.8
TDP1-217ENST00000557782 ANKRD13BQ86YJ7 626 aa3.79□□□□□ -1.8
TDP1-217ENST00000557782 UXS1Q8NBZ7 420 aa3.79□□□□□ -1.8
TDP1-217ENST00000557782 DBF4BQ8NFT6 615 aa3.79□□□□□ -1.8
TDP1-217ENST00000557782 CEP76Q8TAP6 659 aa3.79□□□□□ -1.8
TDP1-217ENST00000557782 KIAA1524Q8TCG1 905 aa3.79□□□□□ -1.8
TDP1-217ENST00000557782 NEU4Q8WWR8 484 aaPredicted RBP3.79□□□□□ -1.8
TDP1-217ENST00000557782 TFAP2BQ92481 460 aa3.79□□□□□ -1.8
TDP1-217ENST00000557782 BCL2L2Q92843 193 aaPredicted RBP3.79□□□□□ -1.8
TDP1-217ENST00000557782 ERLEC1Q96DZ1 483 aa3.79□□□□□ -1.8
TDP1-217ENST00000557782 DAZAP1Q96EP5 407 aaKnown RBP3.79□□□□□ -1.8
TDP1-217ENST00000557782 CDCA5Q96FF9 252 aa3.79□□□□□ -1.8
TDP1-217ENST00000557782 P2RY11Q96G91 374 aa3.79□□□□□ -1.8
TDP1-217ENST00000557782 C5orf30Q96GV9 206 aa3.79□□□□□ -1.8
TDP1-217ENST00000557782 EGLN2Q96KS0 407 aa3.79□□□□□ -1.8
TDP1-217ENST00000557782 CTAGE1Q96RT6 745 aa3.79□□□□□ -1.8
TDP1-217ENST00000557782 KCNK16Q96T55 309 aa3.79□□□□□ -1.8
TDP1-217ENST00000557782 DDOQ99489 341 aa3.79□□□□□ -1.8
TDP1-217ENST00000557782 AIFM2Q9BRQ8 373 aa3.79□□□□□ -1.8
TDP1-217ENST00000557782 SCNM1Q9BWG6 230 aa3.79□□□□□ -1.8
TDP1-217ENST00000557782 KLC2Q9H0B6 622 aa3.79□□□□□ -1.8
TDP1-217ENST00000557782 CDT1Q9H211 546 aa3.79□□□□□ -1.8
TDP1-217ENST00000557782 PIGMQ9H3S5 423 aa3.79□□□□□ -1.8
TDP1-217ENST00000557782 FZD8Q9H461 694 aa3.79□□□□□ -1.8
TDP1-217ENST00000557782 EQTNQ9NQ60 294 aa3.79□□□□□ -1.8
TDP1-217ENST00000557782 TMEM161AQ9NX61 479 aa3.79□□□□□ -1.8
TDP1-217ENST00000557782 CGNQ9P2M7 1197 aaKnown RBP3.79□□□□□ -1.8
TDP1-217ENST00000557782 POLLQ9UGP5 575 aa3.79□□□□□ -1.8
TDP1-217ENST00000557782 NDRG3Q9UGV2 375 aa3.79□□□□□ -1.8
TDP1-217ENST00000557782 DBNLQ9UJU6 430 aaKnown RBP3.79□□□□□ -1.8
TDP1-217ENST00000557782 ITM2BQ9Y287 266 aa3.79□□□□□ -1.8
TDP1-217ENST00000557782 ARHGEF40Q8TER5 1519 aa3.79□□□□□ -1.8
TDP1-217ENST00000557782 TMEM202A6NGA9 273 aa3.78□□□□□ -1.8
TDP1-217ENST00000557782 WIPF3A6NGB9 483 aa3.78□□□□□ -1.8
TDP1-217ENST00000557782 SDR42E2A6NKP2 422 aa3.78□□□□□ -1.8
TDP1-217ENST00000557782 BTBD19C9JJ37 291 aa3.78□□□□□ -1.8
TDP1-217ENST00000557782 TRIM77I1YAP6 450 aa3.78□□□□□ -1.8
TDP1-217ENST00000557782 CLDN4O14493 209 aa3.78□□□□□ -1.8
TDP1-217ENST00000557782 VCYO14598 125 aa3.78□□□□□ -1.8
TDP1-217ENST00000557782 KLK8O60259 260 aa3.78□□□□□ -1.8
TDP1-217ENST00000557782 PEX11AO75192 247 aa3.78□□□□□ -1.8
TDP1-217ENST00000557782 LETM1O95202 739 aaPredicted RBP3.78□□□□□ -1.8
TDP1-217ENST00000557782 PGLSO95336 258 aa3.78□□□□□ -1.8
TDP1-217ENST00000557782 GH1P01241 217 aa3.78□□□□□ -1.8
TDP1-217ENST00000557782 CYP2D6P10635 497 aa3.78□□□□□ -1.8
TDP1-217ENST00000557782 GHRP10912 638 aa3.78□□□□□ -1.8
TDP1-217ENST00000557782 ITGAMP11215 1152 aa3.78□□□□□ -1.8
TDP1-217ENST00000557782 ACO1P21399 889 aaKnown RBP3.78□□□□□ -1.8
TDP1-217ENST00000557782 BMP5P22003 454 aa3.78□□□□□ -1.8
TDP1-217ENST00000557782 UBA1P22314 1058 aaKnown RBP3.78□□□□□ -1.8
TDP1-217ENST00000557782 PEX19P40855 299 aa3.78□□□□□ -1.8
TDP1-217ENST00000557782 FRKP42685 505 aaPredicted RBP3.78□□□□□ -1.8
TDP1-217ENST00000557782 ACAA2P42765 397 aaKnown RBP3.78□□□□□ -1.8
TDP1-217ENST00000557782 PSMC4P43686 418 aa3.78□□□□□ -1.8
TDP1-217ENST00000557782 SOX2P48431 317 aa3.78□□□□□ -1.8
TDP1-217ENST00000557782 TDO2P48775 406 aa3.78□□□□□ -1.8
TDP1-217ENST00000557782 MTA1Q13330 715 aa3.78□□□□□ -1.8
TDP1-217ENST00000557782 TRA2AQ13595 282 aaKnown RBP eCLIP3.78□□□□□ -1.8
TDP1-217ENST00000557782 TP53BP2Q13625 1128 aa3.78□□□□□ -1.8
TDP1-217ENST00000557782 ZXDCQ2QGD7 858 aaPredicted RBP3.78□□□□□ -1.8
TDP1-217ENST00000557782 PLEKHO1Q53GL0 409 aaPredicted RBP3.78□□□□□ -1.8
TDP1-217ENST00000557782 ESCO2Q56NI9 601 aa3.78□□□□□ -1.8
TDP1-217ENST00000557782 SGO1Q5FBB7 561 aa3.78□□□□□ -1.8
TDP1-217ENST00000557782 PRAMEF19Q5SWL8 479 aa3.78□□□□□ -1.8
TDP1-217ENST00000557782 RNASEH2BQ5TBB1 312 aaKnown RBP3.78□□□□□ -1.8
TDP1-217ENST00000557782 PLEKHA7Q6IQ23 1121 aa3.78□□□□□ -1.8
TDP1-217ENST00000557782 AAGABQ6PD74 315 aa3.78□□□□□ -1.8
TDP1-217ENST00000557782 MFSD7Q6UXD7 560 aa3.78□□□□□ -1.8
TDP1-217ENST00000557782 LRIG3Q6UXM1 1119 aa3.78□□□□□ -1.8
TDP1-217ENST00000557782 PQLC2Q6ZP29 291 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms