RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 DNAJC12Q9UKB3 198 aa5.85□□□□□ -1.47
VPS33B-207ENST00000557470 PILRAQ9UKJ1 303 aa5.85□□□□□ -1.47
VPS33B-207ENST00000557470 SPEF1Q9Y4P9 236 aa5.85□□□□□ -1.47
VPS33B-207ENST00000557470 CELSR2Q9HCU4 2923 aa5.85□□□□□ -1.47
VPS33B-207ENST00000557470 ANKRD36A6QL64 1941 aa5.85□□□□□ -1.47
VPS33B-207ENST00000557470 ABCA12Q86UK0 2595 aa5.85□□□□□ -1.47
VPS33B-207ENST00000557470 CRYBG3Q68DQ2 2970 aa5.85□□□□□ -1.47
VPS33B-207ENST00000557470 ARHGEF17Q96PE2 2063 aaPredicted RBP5.84□□□□□ -1.47
VPS33B-207ENST00000557470 IGHV1OR21-1A0A087WYE8 117 aa5.84□□□□□ -1.47
VPS33B-207ENST00000557470 LOC101059948A0A1B0GTJ6 334 aa5.84□□□□□ -1.47
VPS33B-207ENST00000557470 DYTNA2CJ06 578 aa5.84□□□□□ -1.47
VPS33B-207ENST00000557470 GTPBP10A4D1E9 387 aaKnown RBP5.84□□□□□ -1.47
VPS33B-207ENST00000557470 GOLGA6L4A6NEF3 574 aa5.84□□□□□ -1.47
VPS33B-207ENST00000557470 EFCAB7A8K855 629 aa5.84□□□□□ -1.47
VPS33B-207ENST00000557470 B4E171 279 aa5.84□□□□□ -1.47
VPS33B-207ENST00000557470 RASA4BC9J798 803 aa5.84□□□□□ -1.47
VPS33B-207ENST00000557470 K7EM74 188 aa5.84□□□□□ -1.47
VPS33B-207ENST00000557470 TEX33O43247 280 aa5.84□□□□□ -1.47
VPS33B-207ENST00000557470 RASA4O43374 803 aa5.84□□□□□ -1.47
VPS33B-207ENST00000557470 LSM8O95777 96 aaKnown RBP5.84□□□□□ -1.47
VPS33B-207ENST00000557470 FUCA1P04066 466 aa5.84□□□□□ -1.47
VPS33B-207ENST00000557470 KRT7P08729 469 aa5.84□□□□□ -1.47
VPS33B-207ENST00000557470 HOXC4P09017 264 aaPredicted RBP5.84□□□□□ -1.47
VPS33B-207ENST00000557470 ELFN1P0C7U0 828 aa5.84□□□□□ -1.47
VPS33B-207ENST00000557470 THRAP10827 490 aa5.84□□□□□ -1.47
VPS33B-207ENST00000557470 CCNB1P14635 433 aa5.84□□□□□ -1.47
VPS33B-207ENST00000557470 CYP11B1P15538 503 aa5.84□□□□□ -1.47
VPS33B-207ENST00000557470 NR1D1P20393 614 aa5.84□□□□□ -1.47
VPS33B-207ENST00000557470 KELP23276 732 aa5.84□□□□□ -1.47
VPS33B-207ENST00000557470 AK4P27144 223 aaPredicted RBP5.84□□□□□ -1.47
VPS33B-207ENST00000557470 CSTF2P33240 577 aaKnown RBP eCLIP5.84□□□□□ -1.47
VPS33B-207ENST00000557470 TRIM23P36406 574 aa5.84□□□□□ -1.47
VPS33B-207ENST00000557470 TSPAN7P41732 249 aa5.84□□□□□ -1.47
VPS33B-207ENST00000557470 STAT1P42224 750 aa5.84□□□□□ -1.47
VPS33B-207ENST00000557470 UQCRFS1P47985 274 aa5.84□□□□□ -1.47
VPS33B-207ENST00000557470 MLLT10P55197 1068 aa5.84□□□□□ -1.47
VPS33B-207ENST00000557470 ILF3Q12906 894 aaKnown RBP eCLIP5.84□□□□□ -1.47
VPS33B-207ENST00000557470 KLRB1Q12918 225 aa5.84□□□□□ -1.47
VPS33B-207ENST00000557470 TRA2AQ13595 282 aaKnown RBP eCLIP5.84□□□□□ -1.47
VPS33B-207ENST00000557470 CYTH1Q15438 398 aa5.84□□□□□ -1.47
VPS33B-207ENST00000557470 CLPPQ16740 277 aaPredicted RBP5.84□□□□□ -1.47
VPS33B-207ENST00000557470 DEFB109BQ30KR1 87 aa5.84□□□□□ -1.47
VPS33B-207ENST00000557470 CCDC14Q49A88 953 aa5.84□□□□□ -1.47
VPS33B-207ENST00000557470 CFAP58Q5T655 872 aa5.84□□□□□ -1.47
VPS33B-207ENST00000557470 DCAF12Q5T6F0 453 aa5.84□□□□□ -1.47
VPS33B-207ENST00000557470 NAA35Q5VZE5 725 aa5.84□□□□□ -1.47
VPS33B-207ENST00000557470 ANKS6Q68DC2 871 aa5.84□□□□□ -1.47
VPS33B-207ENST00000557470 SLC30A9Q6PML9 568 aa5.84□□□□□ -1.47
VPS33B-207ENST00000557470 C6orf15Q6UXA7 325 aaPredicted RBP5.84□□□□□ -1.47
VPS33B-207ENST00000557470 LIPIQ6XZB0 460 aa5.84□□□□□ -1.47
VPS33B-207ENST00000557470 C8orf86Q6ZUL3 223 aa5.84□□□□□ -1.47
VPS33B-207ENST00000557470 ARCQ7LC44 396 aa5.84□□□□□ -1.47
VPS33B-207ENST00000557470 STRA8Q7Z7C7 330 aa5.84□□□□□ -1.47
VPS33B-207ENST00000557470 PHLDB2Q86SQ0 1253 aa5.84□□□□□ -1.47
VPS33B-207ENST00000557470 DNAAF5Q86Y56 855 aa5.84□□□□□ -1.47
VPS33B-207ENST00000557470 CREBRFQ8IUR6 639 aa5.84□□□□□ -1.47
VPS33B-207ENST00000557470 NRSN1Q8IZ57 195 aa5.84□□□□□ -1.47
VPS33B-207ENST00000557470 NLGN4XQ8N0W4 816 aa5.84□□□□□ -1.47
VPS33B-207ENST00000557470 PYROXD2Q8N2H3 581 aa5.84□□□□□ -1.47
VPS33B-207ENST00000557470 RTL3Q8N8U3 475 aaKnown RBP5.84□□□□□ -1.47
VPS33B-207ENST00000557470 BMPERQ8N8U9 685 aa5.84□□□□□ -1.47
VPS33B-207ENST00000557470 NLGN4YQ8NFZ3 816 aaPredicted RBP5.84□□□□□ -1.47
VPS33B-207ENST00000557470 GPT2Q8TD30 523 aa5.84□□□□□ -1.47
VPS33B-207ENST00000557470 HCAR2Q8TDS4 363 aa5.84□□□□□ -1.47
VPS33B-207ENST00000557470 APOBEC4Q8WW27 367 aaKnown RBP5.84□□□□□ -1.47
VPS33B-207ENST00000557470 CPA5Q8WXQ8 436 aa5.84□□□□□ -1.47
VPS33B-207ENST00000557470 STARD8Q92502 1023 aa5.84□□□□□ -1.47
VPS33B-207ENST00000557470 KIAA1143Q96AT1 154 aaPredicted RBP5.84□□□□□ -1.47
VPS33B-207ENST00000557470 TRIM44Q96DX7 344 aaPredicted RBP5.84□□□□□ -1.47
VPS33B-207ENST00000557470 ZNF641Q96N77 438 aaPredicted RBP5.84□□□□□ -1.47
VPS33B-207ENST00000557470 CTRCQ99895 268 aa5.84□□□□□ -1.47
VPS33B-207ENST00000557470 ELAC2Q9BQ52 826 aaKnown RBP5.84□□□□□ -1.47
VPS33B-207ENST00000557470 GSDMCQ9BYG8 508 aa5.84□□□□□ -1.47
VPS33B-207ENST00000557470 SPRY4Q9C004 299 aa5.84□□□□□ -1.47
VPS33B-207ENST00000557470 GPN2Q9H9Y4 310 aaPredicted RBP5.84□□□□□ -1.47
VPS33B-207ENST00000557470 CARS2Q9HA77 564 aaKnown RBP5.84□□□□□ -1.47
VPS33B-207ENST00000557470 TAAR2Q9P1P5 351 aa5.84□□□□□ -1.47
VPS33B-207ENST00000557470 TP53TG5Q9Y2B4 290 aa5.84□□□□□ -1.47
VPS33B-207ENST00000557470 ST14Q9Y5Y6 855 aa5.84□□□□□ -1.47
VPS33B-207ENST00000557470 ADARB2-AS1A8MUL3 147 aa5.83□□□□□ -1.48
VPS33B-207ENST00000557470 A8MX80 341 aa5.83□□□□□ -1.48
VPS33B-207ENST00000557470 B2RBV5 119 aa5.83□□□□□ -1.48
VPS33B-207ENST00000557470 PPM1DO15297 605 aa5.83□□□□□ -1.48
VPS33B-207ENST00000557470 ZW10O43264 779 aa5.83□□□□□ -1.48
VPS33B-207ENST00000557470 FBXO24O75426 580 aa5.83□□□□□ -1.48
VPS33B-207ENST00000557470 AGFG2O95081 481 aa5.83□□□□□ -1.48
VPS33B-207ENST00000557470 ZRANB2O95218 330 aaKnown RBP eCLIP5.83□□□□□ -1.48
VPS33B-207ENST00000557470 FGFR1OPO95684 399 aaKnown RBP5.83□□□□□ -1.48
VPS33B-207ENST00000557470 CEACAM5P06731 702 aa5.83□□□□□ -1.48
VPS33B-207ENST00000557470 MMEP08473 750 aa5.83□□□□□ -1.48
VPS33B-207ENST00000557470 ALAS2P22557 587 aa5.83□□□□□ -1.48
VPS33B-207ENST00000557470 MAP4P27816 1152 aaKnown RBP5.83□□□□□ -1.48
VPS33B-207ENST00000557470 EPHB2P29323 1055 aa5.83□□□□□ -1.48
VPS33B-207ENST00000557470 SDC4P31431 198 aa5.83□□□□□ -1.48
VPS33B-207ENST00000557470 HALP42357 657 aa5.83□□□□□ -1.48
VPS33B-207ENST00000557470 PTPN9P43378 593 aa5.83□□□□□ -1.48
VPS33B-207ENST00000557470 GPR3P46089 330 aa5.83□□□□□ -1.48
VPS33B-207ENST00000557470 GNPDA1P46926 289 aa5.83□□□□□ -1.48
VPS33B-207ENST00000557470 RGRP47804 291 aa5.83□□□□□ -1.48
VPS33B-207ENST00000557470 HDAC4P56524 1084 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms