RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 SLC18B1Q6NT16 456 aa4.82□□□□□ -1.64
ATXN3-246ENST00000557030 PPP1R2P3Q6NXS1 205 aa4.82□□□□□ -1.64
ATXN3-246ENST00000557030 TTC27Q6P3X3 843 aa4.82□□□□□ -1.64
ATXN3-246ENST00000557030 TMEM65Q6PI78 240 aa4.82□□□□□ -1.64
ATXN3-246ENST00000557030 VSTM1Q6UX27 236 aa4.82□□□□□ -1.64
ATXN3-246ENST00000557030 RGS9BPQ6ZS82 235 aa4.82□□□□□ -1.64
ATXN3-246ENST00000557030 TMEM179Q6ZVK1 233 aa4.82□□□□□ -1.64
ATXN3-246ENST00000557030 CCDC25Q86WR0 208 aa4.82□□□□□ -1.64
ATXN3-246ENST00000557030 CCDC28AQ8IWP9 274 aa4.82□□□□□ -1.64
ATXN3-246ENST00000557030 C12orf56Q8IXR9 622 aa4.82□□□□□ -1.64
ATXN3-246ENST00000557030 MYCT1Q8N699 235 aa4.82□□□□□ -1.64
ATXN3-246ENST00000557030 Q8N9P0 234 aaPredicted RBP4.82□□□□□ -1.64
ATXN3-246ENST00000557030 GMCL1P1Q8NEA9 526 aa4.82□□□□□ -1.64
ATXN3-246ENST00000557030 KIFAP3Q92845 792 aa4.82□□□□□ -1.64
ATXN3-246ENST00000557030 CD101Q93033 1021 aa4.82□□□□□ -1.64
ATXN3-246ENST00000557030 SPDL1Q96EA4 605 aa4.82□□□□□ -1.64
ATXN3-246ENST00000557030 VPS50Q96JG6 964 aa4.82□□□□□ -1.64
ATXN3-246ENST00000557030 PRMT6Q96LA8 375 aaPredicted RBP4.82□□□□□ -1.64
ATXN3-246ENST00000557030 C5orf34Q96MH7 638 aa4.82□□□□□ -1.64
ATXN3-246ENST00000557030 CFAP57Q96MR6 1250 aa4.82□□□□□ -1.64
ATXN3-246ENST00000557030 TTC25Q96NG3 672 aa4.82□□□□□ -1.64
ATXN3-246ENST00000557030 ZNF570Q96NI8 536 aa4.82□□□□□ -1.64
ATXN3-246ENST00000557030 EIF2AK1Q9BQI3 630 aaKnown RBP4.82□□□□□ -1.64
ATXN3-246ENST00000557030 ZCWPW1Q9H0M4 648 aa4.82□□□□□ -1.64
ATXN3-246ENST00000557030 THAP2Q9H0W7 228 aa4.82□□□□□ -1.64
ATXN3-246ENST00000557030 PCDHAC1Q9H158 963 aa4.82□□□□□ -1.64
ATXN3-246ENST00000557030 CDC42EP4Q9H3Q1 356 aaKnown RBP4.82□□□□□ -1.64
ATXN3-246ENST00000557030 TDRD3Q9H7E2 651 aaKnown RBP4.82□□□□□ -1.64
ATXN3-246ENST00000557030 ERVK-5Q9HDB9 667 aa4.82□□□□□ -1.64
ATXN3-246ENST00000557030 KCNK9Q9NPC2 374 aa4.82□□□□□ -1.64
ATXN3-246ENST00000557030 TRIM36Q9NQ86 728 aa4.82□□□□□ -1.64
ATXN3-246ENST00000557030 SAR1AQ9NR31 198 aa4.82□□□□□ -1.64
ATXN3-246ENST00000557030 PDGFCQ9NRA1 345 aa4.82□□□□□ -1.64
ATXN3-246ENST00000557030 FGFR1OP2Q9NVK5 253 aa4.82□□□□□ -1.64
ATXN3-246ENST00000557030 TMOD4Q9NZQ9 345 aa4.82□□□□□ -1.64
ATXN3-246ENST00000557030 PI4KBQ9UBF8 816 aa4.82□□□□□ -1.64
ATXN3-246ENST00000557030 ASIC3Q9UHC3 531 aa4.82□□□□□ -1.64
ATXN3-246ENST00000557030 GTF3C4Q9UKN8 822 aa4.82□□□□□ -1.64
ATXN3-246ENST00000557030 LRCH1Q9Y2L9 728 aa4.82□□□□□ -1.64
ATXN3-246ENST00000557030 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.82□□□□□ -1.64
ATXN3-246ENST00000557030 USH1CQ9Y6N9 552 aa4.82□□□□□ -1.64
ATXN3-246ENST00000557030 COL4A5P29400 1685 aa4.82□□□□□ -1.64
ATXN3-246ENST00000557030 CNTNAP1P78357 1384 aa4.81□□□□□ -1.64
ATXN3-246ENST00000557030 ZMYM2Q9UBW7 1377 aa4.81□□□□□ -1.64
ATXN3-246ENST00000557030 FAM234BA2RU67 622 aa4.81□□□□□ -1.64
ATXN3-246ENST00000557030 LRRD1A4D1F6 860 aa4.81□□□□□ -1.64
ATXN3-246ENST00000557030 FAM47DPA6NHR8 397 aa4.81□□□□□ -1.64
ATXN3-246ENST00000557030 A8MVJ9 347 aa4.81□□□□□ -1.64
ATXN3-246ENST00000557030 PRPF4O43172 522 aaKnown RBP eCLIP4.81□□□□□ -1.64
ATXN3-246ENST00000557030 CCNT2O60583 730 aaKnown RBP4.81□□□□□ -1.64
ATXN3-246ENST00000557030 WDR47O94967 919 aa4.81□□□□□ -1.64
ATXN3-246ENST00000557030 MT-CO3P00414 261 aa4.81□□□□□ -1.64
ATXN3-246ENST00000557030 GH2P01242 217 aa4.81□□□□□ -1.64
ATXN3-246ENST00000557030 KRT16P08779 473 aa4.81□□□□□ -1.64
ATXN3-246ENST00000557030 MYBL1P10243 752 aa4.81□□□□□ -1.64
ATXN3-246ENST00000557030 ATF7P17544 494 aaPredicted RBP4.81□□□□□ -1.64
ATXN3-246ENST00000557030 ATP6V1C1P21283 382 aa4.81□□□□□ -1.64
ATXN3-246ENST00000557030 DRD1P21728 446 aa4.81□□□□□ -1.64
ATXN3-246ENST00000557030 CALB2P22676 271 aa4.81□□□□□ -1.64
ATXN3-246ENST00000557030 ADRA1DP25100 572 aa4.81□□□□□ -1.64
ATXN3-246ENST00000557030 SLC1A1P43005 524 aa4.81□□□□□ -1.64
ATXN3-246ENST00000557030 SLCO1A2P46721 670 aa4.81□□□□□ -1.64
ATXN3-246ENST00000557030 RBM5P52756 815 aaKnown RBP eCLIP4.81□□□□□ -1.64
ATXN3-246ENST00000557030 POLGP54098 1239 aaPredicted RBP4.81□□□□□ -1.64
ATXN3-246ENST00000557030 MFAP3P55082 362 aa4.81□□□□□ -1.64
ATXN3-246ENST00000557030 PSMC6P62333 389 aa4.81□□□□□ -1.64
ATXN3-246ENST00000557030 KCNJ2P63252 427 aa4.81□□□□□ -1.64
ATXN3-246ENST00000557030 SARNPP82979 210 aaKnown RBP4.81□□□□□ -1.64
ATXN3-246ENST00000557030 TXNL4AP83876 142 aaKnown RBP4.81□□□□□ -1.64
ATXN3-246ENST00000557030 TNFAIP2Q03169 654 aa4.81□□□□□ -1.64
ATXN3-246ENST00000557030 ENPEPQ07075 957 aa4.81□□□□□ -1.64
ATXN3-246ENST00000557030 PTP4A2Q12974 167 aa4.81□□□□□ -1.64
ATXN3-246ENST00000557030 FHL3Q13643 280 aa4.81□□□□□ -1.64
ATXN3-246ENST00000557030 KLF9Q13886 244 aaPredicted RBP4.81□□□□□ -1.64
ATXN3-246ENST00000557030 MESDQ14696 234 aa4.81□□□□□ -1.64
ATXN3-246ENST00000557030 RASA2Q15283 850 aa4.81□□□□□ -1.64
ATXN3-246ENST00000557030 SGSM1Q2NKQ1 1148 aa4.81□□□□□ -1.64
ATXN3-246ENST00000557030 ARHGAP15Q53QZ3 475 aa4.81□□□□□ -1.64
ATXN3-246ENST00000557030 ANKRD20A2Q5SQ80 823 aa4.81□□□□□ -1.64
ATXN3-246ENST00000557030 ANKRD20A1Q5TYW2 823 aa4.81□□□□□ -1.64
ATXN3-246ENST00000557030 ANKRD20A3Q5VUR7 823 aa4.81□□□□□ -1.64
ATXN3-246ENST00000557030 AP1ARQ63HQ0 302 aa4.81□□□□□ -1.64
ATXN3-246ENST00000557030 RAP1GAP2Q684P5 730 aa4.81□□□□□ -1.64
ATXN3-246ENST00000557030 ABLIM2Q6H8Q1 611 aa4.81□□□□□ -1.64
ATXN3-246ENST00000557030 GRHL2Q6ISB3 625 aa4.81□□□□□ -1.64
ATXN3-246ENST00000557030 RINT1Q6NUQ1 792 aa4.81□□□□□ -1.64
ATXN3-246ENST00000557030 MIS18BP1Q6P0N0 1132 aa4.81□□□□□ -1.64
ATXN3-246ENST00000557030 GJB7Q6PEY0 223 aa4.81□□□□□ -1.64
ATXN3-246ENST00000557030 RHBDF2Q6PJF5 856 aa4.81□□□□□ -1.64
ATXN3-246ENST00000557030 C1orf186Q6ZWK4 172 aa4.81□□□□□ -1.64
ATXN3-246ENST00000557030 ENOSF1Q7L5Y1 443 aa4.81□□□□□ -1.64
ATXN3-246ENST00000557030 ZNF720Q7Z2F6 126 aa4.81□□□□□ -1.64
ATXN3-246ENST00000557030 VSIG1Q86XK7 387 aa4.81□□□□□ -1.64
ATXN3-246ENST00000557030 TDRPQ86YL5 185 aa4.81□□□□□ -1.64
ATXN3-246ENST00000557030 MFN1Q8IWA4 741 aa4.81□□□□□ -1.64
ATXN3-246ENST00000557030 SYCP3Q8IZU3 236 aa4.81□□□□□ -1.64
ATXN3-246ENST00000557030 CCDC89Q8N998 374 aa4.81□□□□□ -1.64
ATXN3-246ENST00000557030 ANKRD42Q8N9B4 389 aa4.81□□□□□ -1.64
ATXN3-246ENST00000557030 MBD3L2Q8NHZ7 208 aaPredicted RBP4.81□□□□□ -1.64
ATXN3-246ENST00000557030 ZNF564Q8TBZ8 553 aaPredicted RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms