RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 CHPFQ8IZ52 775 aa5.32□□□□□ -1.56
ATXN3-244ENST00000556898 UNC5BQ8IZJ1 945 aa5.32□□□□□ -1.56
ATXN3-244ENST00000556898 BBS5Q8N3I7 341 aa5.32□□□□□ -1.56
ATXN3-244ENST00000556898 ZCCHC9Q8N567 271 aaKnown RBP5.32□□□□□ -1.56
ATXN3-244ENST00000556898 PCDH20Q8N6Y1 951 aaKnown RBP5.32□□□□□ -1.56
ATXN3-244ENST00000556898 PNPLA1Q8N8W4 532 aa5.32□□□□□ -1.56
ATXN3-244ENST00000556898 ZNF557Q8N988 423 aaPredicted RBP5.32□□□□□ -1.56
ATXN3-244ENST00000556898 TXNDC5Q8NBS9 432 aaKnown RBP5.32□□□□□ -1.56
ATXN3-244ENST00000556898 RPLP0P6Q8NHW5 317 aa5.32□□□□□ -1.56
ATXN3-244ENST00000556898 CCHCR1Q8TD31 782 aa5.32□□□□□ -1.56
ATXN3-244ENST00000556898 AENQ8WTP8 325 aaKnown RBP5.32□□□□□ -1.56
ATXN3-244ENST00000556898 EXOC4Q96A65 974 aa5.32□□□□□ -1.56
ATXN3-244ENST00000556898 SIGLEC10Q96LC7 697 aa5.32□□□□□ -1.56
ATXN3-244ENST00000556898 C9orf72Q96LT7 481 aa5.32□□□□□ -1.56
ATXN3-244ENST00000556898 KLHL32Q96NJ5 620 aa5.32□□□□□ -1.56
ATXN3-244ENST00000556898 TRIB3Q96RU7 358 aa5.32□□□□□ -1.56
ATXN3-244ENST00000556898 FERMT1Q9BQL6 677 aa5.32□□□□□ -1.56
ATXN3-244ENST00000556898 EPB41L4BQ9H329 900 aa5.32□□□□□ -1.56
ATXN3-244ENST00000556898 CDC42EP4Q9H3Q1 356 aaKnown RBP5.32□□□□□ -1.56
ATXN3-244ENST00000556898 PLAC1Q9HBJ0 212 aa5.32□□□□□ -1.56
ATXN3-244ENST00000556898 CD93Q9NPY3 652 aa5.32□□□□□ -1.56
ATXN3-244ENST00000556898 CASS4Q9NQ75 786 aa5.32□□□□□ -1.56
ATXN3-244ENST00000556898 PRSS16Q9NQE7 514 aa5.32□□□□□ -1.56
ATXN3-244ENST00000556898 VPS45Q9NRW7 570 aa5.32□□□□□ -1.56
ATXN3-244ENST00000556898 IGSF5Q9NSI5 407 aa5.32□□□□□ -1.56
ATXN3-244ENST00000556898 NINJ2Q9NZG7 142 aa5.32□□□□□ -1.56
ATXN3-244ENST00000556898 CHMP2BQ9UQN3 213 aa5.32□□□□□ -1.56
ATXN3-244ENST00000556898 KCTD3Q9Y597 815 aa5.32□□□□□ -1.56
ATXN3-244ENST00000556898 SHROOM3Q8TF72 1996 aa5.32□□□□□ -1.56
ATXN3-244ENST00000556898 CHD6Q8TD26 2715 aa5.32□□□□□ -1.56
ATXN3-244ENST00000556898 CHD5Q8TDI0 1954 aa5.31□□□□□ -1.56
ATXN3-244ENST00000556898 EDDM13A0A1B0GTR0 161 aa5.31□□□□□ -1.56
ATXN3-244ENST00000556898 LOC285095A0A1B0GVY8 99 aa5.31□□□□□ -1.56
ATXN3-244ENST00000556898 A0A1W2PQF6 199 aa5.31□□□□□ -1.56
ATXN3-244ENST00000556898 DBX1A6NMT0 343 aa5.31□□□□□ -1.56
ATXN3-244ENST00000556898 TRAFD1O14545 582 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-244ENST00000556898 TIMM44O43615 452 aa5.31□□□□□ -1.56
ATXN3-244ENST00000556898 RPP40O75818 363 aaKnown RBP5.31□□□□□ -1.56
ATXN3-244ENST00000556898 PIAS1O75925 651 aa5.31□□□□□ -1.56
ATXN3-244ENST00000556898 ANXA9O76027 345 aa5.31□□□□□ -1.56
ATXN3-244ENST00000556898 PGLSO95336 258 aa5.31□□□□□ -1.56
ATXN3-244ENST00000556898 SLC4A1P02730 911 aa5.31□□□□□ -1.56
ATXN3-244ENST00000556898 SERPINF2P08697 491 aa5.31□□□□□ -1.56
ATXN3-244ENST00000556898 FAM87AP0C7U9 286 aa5.31□□□□□ -1.56
ATXN3-244ENST00000556898 CEACAM1P13688 526 aa5.31□□□□□ -1.56
ATXN3-244ENST00000556898 H2AFXP16104 143 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-244ENST00000556898 DRD1P21728 446 aa5.31□□□□□ -1.56
ATXN3-244ENST00000556898 NMBRP28336 390 aa5.31□□□□□ -1.56
ATXN3-244ENST00000556898 SSTR1P30872 391 aa5.31□□□□□ -1.56
ATXN3-244ENST00000556898 CA5AP35218 305 aa5.31□□□□□ -1.56
ATXN3-244ENST00000556898 HSPA9P38646 679 aaKnown RBP5.31□□□□□ -1.56
ATXN3-244ENST00000556898 ELK3P41970 407 aa5.31□□□□□ -1.56
ATXN3-244ENST00000556898 MAGEA4P43358 317 aa5.31□□□□□ -1.56
ATXN3-244ENST00000556898 TNFRSF4P43489 277 aa5.31□□□□□ -1.56
ATXN3-244ENST00000556898 TNNT3P45378 269 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-244ENST00000556898 PSMD8P48556 350 aa5.31□□□□□ -1.56
ATXN3-244ENST00000556898 CSNK1DP48730 415 aa5.31□□□□□ -1.56
ATXN3-244ENST00000556898 COPAP53621 1224 aa5.31□□□□□ -1.56
ATXN3-244ENST00000556898 GEMIN4P57678 1058 aaKnown RBP5.31□□□□□ -1.56
ATXN3-244ENST00000556898 GPX6P59796 221 aa5.31□□□□□ -1.56
ATXN3-244ENST00000556898 AP1S1P61966 158 aa5.31□□□□□ -1.56
ATXN3-244ENST00000556898 TMPRSS15P98073 1019 aa5.31□□□□□ -1.56
ATXN3-244ENST00000556898 CDK18Q07002 472 aa5.31□□□□□ -1.56
ATXN3-244ENST00000556898 BCL2L1Q07817 233 aa5.31□□□□□ -1.56
ATXN3-244ENST00000556898 NSUN2Q08J23 767 aaKnown RBP eCLIP5.31□□□□□ -1.56
ATXN3-244ENST00000556898 GRSF1Q12849 480 aaKnown RBP eCLIP5.31□□□□□ -1.56
ATXN3-244ENST00000556898 CUL1Q13616 776 aa5.31□□□□□ -1.56
ATXN3-244ENST00000556898 INPP5AQ14642 412 aa5.31□□□□□ -1.56
ATXN3-244ENST00000556898 POU6F1Q14863 301 aa5.31□□□□□ -1.56
ATXN3-244ENST00000556898 EFTUD2Q15029 972 aaKnown RBP eCLIP5.31□□□□□ -1.56
ATXN3-244ENST00000556898 EIF4HQ15056 248 aaKnown RBP5.31□□□□□ -1.56
ATXN3-244ENST00000556898 SLC1A5Q15758 541 aa5.31□□□□□ -1.56
ATXN3-244ENST00000556898 CCDC6Q16204 474 aa5.31□□□□□ -1.56
ATXN3-244ENST00000556898 KYNUQ16719 465 aa5.31□□□□□ -1.56
ATXN3-244ENST00000556898 FBLN7Q53RD9 439 aa5.31□□□□□ -1.56
ATXN3-244ENST00000556898 WIPI1Q5MNZ9 446 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-244ENST00000556898 BEND6Q5SZJ8 279 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-244ENST00000556898 ARMC12Q5T9G4 340 aa5.31□□□□□ -1.56
ATXN3-244ENST00000556898 ZBTB37Q5TC79 503 aa5.31□□□□□ -1.56
ATXN3-244ENST00000556898 C4orf22Q6V702 233 aa5.31□□□□□ -1.56
ATXN3-244ENST00000556898 RANBP10Q6VN20 620 aa5.31□□□□□ -1.56
ATXN3-244ENST00000556898 GDPD4Q6W3E5 623 aa5.31□□□□□ -1.56
ATXN3-244ENST00000556898 PARS2Q7L3T8 475 aaKnown RBP5.31□□□□□ -1.56
ATXN3-244ENST00000556898 PCGF5Q86SE9 256 aa5.31□□□□□ -1.56
ATXN3-244ENST00000556898 ATG4DQ86TL0 474 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-244ENST00000556898 TSPAN33Q86UF1 283 aa5.31□□□□□ -1.56
ATXN3-244ENST00000556898 KBTBD6Q86V97 674 aa5.31□□□□□ -1.56
ATXN3-244ENST00000556898 HOOK3Q86VS8 718 aa5.31□□□□□ -1.56
ATXN3-244ENST00000556898 MMAAQ8IVH4 418 aaKnown RBP5.31□□□□□ -1.56
ATXN3-244ENST00000556898 ZBED8Q8IZ13 594 aa5.31□□□□□ -1.56
ATXN3-244ENST00000556898 DNAAF3Q8N9W5 541 aa5.31□□□□□ -1.56
ATXN3-244ENST00000556898 IL17RCQ8NAC3 791 aa5.31□□□□□ -1.56
ATXN3-244ENST00000556898 BBOF1Q8ND07 529 aa5.31□□□□□ -1.56
ATXN3-244ENST00000556898 MCUQ8NE86 351 aa5.31□□□□□ -1.56
ATXN3-244ENST00000556898 FBXO36Q8NEA4 188 aa5.31□□□□□ -1.56
ATXN3-244ENST00000556898 MDGA1Q8NFP4 955 aa5.31□□□□□ -1.56
ATXN3-244ENST00000556898 OR2W6PQ8NHA6 318 aa5.31□□□□□ -1.56
ATXN3-244ENST00000556898 PIP4K2CQ8TBX8 421 aa5.31□□□□□ -1.56
ATXN3-244ENST00000556898 BLOC1S5Q8TDH9 187 aa5.31□□□□□ -1.56
ATXN3-244ENST00000556898 UCMAQ8WVF2 138 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms